Геном прокариот/Материалы:NC 002976

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Эта статья — часть материалов: лаборатории Биоинформатика, исследовательского проекта «Геном прокариот»

   LOCUS       NC_002976            2616530 bp    DNA     circular BCT 17-JAN-2006
   DEFINITION  Staphylococcus epidermidis RP62A, complete genome.
   ACCESSION   NC_002976
   VERSION     NC_002976.3  GI:57865352
   KEYWORDS    .
   SOURCE      Staphylococcus epidermidis RP62A
     ORGANISM  Staphylococcus epidermidis RP62A
               Bacteria; Firmicutes; Bacillales; Staphylococcus.
   REFERENCE   1  (bases 1 to 2616530)
     AUTHORS   Gill,S.R., Fouts,D.E., Archer,G.L., Mongodin,E.F., Deboy,R.T.,
               Ravel,J., Paulsen,I.T., Kolonay,J.F., Brinkac,L., Beanan,M.,
               Dodson,R.J., Daugherty,S.C., Madupu,R., Angiuoli,S.V., Durkin,A.S.,
               Haft,D.H., Vamathevan,J., Khouri,H., Utterback,T., Lee,C.,
               Dimitrov,G., Jiang,L., Qin,H., Weidman,J., Tran,K., Kang,K.,
               Hance,I.R., Nelson,K.E. and Fraser,C.M.
     TITLE     Insights on Evolution of Virulence and Resistance from the Complete
               Genome Analysis of an Early Methicillin-Resistant Staphylococcus
               aureus Strain and a Biofilm-Producing Methicillin-Resistant
               Staphylococcus epidermidis Strain
     JOURNAL   J. Bacteriol. 187 (7), 2426-2438 (2005)
      PUBMED   15774886
   REFERENCE   2  (bases 1 to 2616530)
     AUTHORS   Gill,S.R.
     TITLE     Direct Submission
     JOURNAL   Submitted (20-OCT-2004) The Institute for Genomic Research, 9712
               Medical Center Dr, Rockville, MD 20850, USA
   REFERENCE   3  (bases 1 to 2616530)
     CONSRTM   NCBI Genome Project
     TITLE     Direct Submission
     JOURNAL   Submitted (08-APR-2002) National Center for Biotechnology
               Information, NIH, Bethesda, MD 20894, USA
   COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
               NCBI review. The reference sequence was derived from CP000029.
               On Jan 18, 2005 this sequence version replaced gi:38154464.
               COMPLETENESS: full length.

Расположение РНК[править]

Начало	Конец	Направление	Длина	PID	Ген	COG	Комментарий
98388	98480	+	93	57865352	SERP_tRNA-Ser-1	-	^{08 Ser tRNA}
101004	101277	+	274	57865352	SERP_SeSRP1	-	sRNA
105734	107287	+	1554	57865352	SERP_Se16SA	-	16S ribosomal RNA
107551	110472	+	2922	57865352	SERP_Se23SA	-	23S ribosomal RNA
110543	110657	+	115	57865352	SERP_Se5SA	-	5S ribosomal RNA
149424	149538	+	115	57865352	SERP_Se5SG	-	1 ribosomal RNA
149549	149624	+	76	57865352	SERP_tRNA-Val-1	-	^{13 Val tRNA}
149631	149706	+	76	57865352	SERP_tRNA-Thr-1	-	^{12 Thr tRNA}
149713	149785	+	73	57865352	SERP_tRNA-Lys-1	-	^{10 Lys tRNA}
149804	149878	+	75	57865352	SERP_tRNA-Gly-1	-	^{01 Gly tRNA}
149890	149978	+	89	57865352	SERP_tRNA-Leu-1	-	^{15 Leu tRNA}
149991	150067	+	77	57865352	SERP_tRNA-Arg-1	-	^{11 Arg tRNA}
150094	150167	+	74	57865352	SERP_tRNA-Pro-1	-	^{03 Pro tRNA}
150182	150257	+	76	57865352	SERP_tRNA-Ala-1	-	^{02 Ala tRNA}
150374	151927	+	1554	57865352	SERP_Se16SB	-	16S ribosomal RNA
152191	155112	+	2922	57865352	SERP_Se23SB	-	23S ribosomal RNA
155183	155297	+	115	57865352	SERP_Se5SB	-	5S ribosomal RNA
155526	157079	+	1554	57865352	SERP_Se16SC	-	16S ribosomal RNA
157175	157251	+	77	57865352	SERP_tRNA-Ile-1	-	^{14 Ile tRNA}
157435	160356	+	2922	57865352	SERP_Se23SC	-	23S ribosomal RNA
160427	160541	+	115	57865352	SERP_Se5SC	-	5S ribosomal RNA
440931	441002	-	72	57865352	SERP_tRNA-Arg-2	-	^{11 Arg tRNA}
457703	458061	+	359	57865352	SERP_SetmRNA1	-	sRNA
612868	612942	+	75	57865352	SERP_tRNA-Asn-1	-	^{07 Asn tRNA}
612946	613034	+	89	57865352	SERP_tRNA-Ser-2	-	^{08 Ser tRNA}
735720	735796	-	77	57865352	SERP_tRNA-Arg-3	-	^{11 Arg tRNA}
1061154	1061554	-	401	57865352	SERP_SernpB1	-	sRNA
1420778	1420866	-	89	57865352	SERP_tRNA-Ser-3	-	^{08 Ser tRNA}
1420920	1420991	-	72	57865352	SERP_tRNA-Glu-1	-	^{04 Glu tRNA}
1420993	1421067	-	75	57865352	SERP_tRNA-Asn-2	-	^{07 Asn tRNA}
1421077	1421150	-	74	57865352	SERP_tRNA-Gly-2	-	^{01 Gly tRNA}
1421168	1421243	-	76	57865352	SERP_tRNA-His-1	-	^{09 His tRNA}
1421257	1421329	-	73	57865352	SERP_tRNA-Phe-1	-	^{17 Phe tRNA}
1421340	1421415	-	76	57865352	SERP_tRNA-Asp-1	-	^{06 Asp tRNA}
1421430	1421503	-	74	57865352	SERP_tRNA-Met-1	-	^{16 Met tRNA}
1454736	1454819	-	84	57865352	SERP_tRNA-Leu-2	-	^{15 Leu tRNA}
1454860	1454934	-	75	57865352	SERP_tRNA-Pseudo-1	-
1454946	1455020	-	75	57865352	SERP_tRNA-Gly-3	-	^{01 Gly tRNA}
1455035	1455109	-	75	57865352	SERP_tRNA-Pseudo-2	-
1455119	1455192	-	74	57865352	SERP_tRNA-Cys-1	-	^{19 Cys tRNA}
1455198	1455269	-	72	57865352	SERP_tRNA-Gln-1	-	^{05 Gln tRNA}
1455281	1455353	-	73	57865352	SERP_tRNA-His-2	-	^{09 His tRNA}
1455356	1455429	-	74	57865352	SERP_tRNA-Trp-1	-	^{20 Trp tRNA}
1455438	1455521	-	84	57865352	SERP_tRNA-Tyr-1	-	^{18 Tyr tRNA}
1455526	1455601	-	76	57865352	SERP_tRNA-Thr-2	-	^{12 Thr tRNA}
1455610	1455682	-	73	57865352	SERP_tRNA-Phe-2	-	^{17 Phe tRNA}
1455787	1455860	-	74	57865352	SERP_tRNA-Met-2	-	^{16 Met tRNA}
1455872	1455964	-	93	57865352	SERP_tRNA-Ser-4	-	^{08 Ser tRNA}
1456002	1456077	-	76	57865352	SERP_tRNA-Asp-2	-	^{06 Asp tRNA}
1456085	1456174	-	90	57865352	SERP_tRNA-Ser-5	-	^{08 Ser tRNA}
1456184	1456257	-	74	57865352	SERP_tRNA-Met-3	-	^{16 Met tRNA}
1456282	1456358	-	77	57865352	SERP_tRNA-Met-4	-	^{16 Met tRNA}
1456383	1456458	-	76	57865352	SERP_tRNA-Ala-2	-	^{02 Ala tRNA}
1456475	1456548	-	74	57865352	SERP_tRNA-Pro-2	-	^{03 Pro tRNA}
1456558	1456631	-	74	57865352	SERP_tRNA-Arg-4	-	^{11 Arg tRNA}
1456644	1456732	-	89	57865352	SERP_tRNA-Leu-3	-	^{15 Leu tRNA}
1456744	1456818	-	75	57865352	SERP_tRNA-Gly-4	-	^{01 Gly tRNA}
1456822	1456904	-	83	57865352	SERP_tRNA-Leu-4	-	^{15 Leu tRNA}
1456913	1456988	-	76	57865352	SERP_tRNA-Lys-2	-	^{10 Lys tRNA}
1456995	1457070	-	76	57865352	SERP_tRNA-Thr-3	-	^{12 Thr tRNA}
1457077	1457152	-	76	57865352	SERP_tRNA-Val-2	-	^{13 Val tRNA}
1457163	1457277	-	115	57865352	SERP_Se5SD	-	5S ribosomal RNA
1457348	1460269	-	2922	57865352	SERP_Se23SD	-	23S ribosomal RNA
1460455	1460530	-	76	57865352	SERP_tRNA-Ala-3	-	^{02 Ala tRNA}
1460551	1460627	-	77	57865352	SERP_tRNA-Ile-2	-	^{14 Ile tRNA}
1460720	1462273	-	1554	57865352	SERP_Se16SD	-	16S ribosomal RNA
1713943	1714057	-	115	57865352	SERP_Se5SE	-	5S ribosomal RNA
1714128	1717049	-	2922	57865352	SERP_Se23SE	-	23S ribosomal RNA
1717312	1718865	-	1554	57865352	SERP_Se16SE	-	16S ribosomal RNA
1718979	1719052	-	74	57865352	SERP_tRNA-Gly-5	-	^{01 Gly tRNA}
1719075	1719161	-	87	57865352	SERP_tRNA-Leu-5	-	^{15 Leu tRNA}
1802766	1802838	-	73	57865352	SERP_tRNA-Lys-3	-	^{10 Lys tRNA}
1802842	1802916	-	75	57865352	SERP_tRNA-Gln-2	-	^{05 Gln tRNA}
1802921	1803004	-	84	57865352	SERP_tRNA-Tyr-2	-	^{18 Tyr tRNA}
1803021	1803096	-	76	57865352	SERP_tRNA-Val-3	-	^{13 Val tRNA}
1803103	1803174	-	72	57865352	SERP_tRNA-Glu-2	-	^{04 Glu tRNA}
1803176	1803250	-	75	57865352	SERP_tRNA-Asn-3	-	^{07 Asn tRNA}
1803264	1803378	-	115	57865352	SERP_Se5SF	-	5S ribosomal RNA
1803449	1806370	-	2922	57865352	SERP_Se23SF	-	23S ribosomal RNA
1806632	1808185	-	1554	57865352	SERP_Se16SF	-	16S ribosomal RNA
2332647	2332739	+	93	57865352	SERP_tRNA-Thr-4	-	^{12 Thr tRNA}
2592263	2592335	-	73	57865352	SERP_tRNA-Asp-3	-	^{06 Asp tRNA}
2592341	2592415	-	75	57865352	SERP_tRNA-Glu-3	-	^{04 Glu tRNA}