Геном прокариот/Материалы:NC 004350

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   LOCUS       NC_004350            2030921 bp    DNA     circular BCT 04-APR-2006
   DEFINITION  Streptococcus mutans UA159, complete genome.
   ACCESSION   NC_004350
   VERSION     NC_004350.1  GI:24378532
   KEYWORDS    .
   SOURCE      Streptococcus mutans UA159
     ORGANISM  Streptococcus mutans UA159
               Bacteria; Firmicutes; Lactobacillales; Streptococcaceae;
               Streptococcus.
   REFERENCE   1  (bases 1 to 2030921)
     AUTHORS   Ajdic,D., McShan,W.M., McLaughlin,R.E., Savic,G., Chang,J.,
               Carson,M.B., Primeaux,C., Tian,R., Kenton,S., Jia,H., Lin,S.,
               Qian,Y., Li,S., Zhu,H., Najar,F., Lai,H., White,J., Roe,B.A. and
               Ferretti,J.J.
     TITLE     Genome sequence of Streptococcus mutans UA159, a cariogenic dental
               pathogen
     JOURNAL   Proc. Natl. Acad. Sci. U.S.A. 99 (22), 14434-14439 (2002)
      PUBMED   12397186
   REFERENCE   2  (bases 1 to 2030921)
     AUTHORS   .
     CONSRTM   NCBI Genome Project
     TITLE     Direct Submission
     JOURNAL   Submitted (10-SEP-2004) National Center for Biotechnology
               Information, NIH, Bethesda, MD 20894, USA
   REFERENCE   3  (bases 1 to 2030921)
     AUTHORS   Ajdic,D., McShan,W.M., McLaughlin,R.E., Savic,G., Chang,J.,
               Carson,M.B., Primeaux,C., Tian,R., Kenton,S., Jia,H., Lin,S.,
               Qian,Y., Li,S., Zhu,H., Najar,F., Lai,H., White,J., Roe,B.A. and
               Ferretti,J.J.
     TITLE     Direct Submission
     JOURNAL   Submitted (09-JUL-2002) Department of Microbiology and Immunology,
               University of Oklahoma Health Sciences Center, 940 SL Young Blvd.,
               Oklahoma City, OK 73104, USA
   COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
               NCBI review. The reference sequence was derived from AE014133.
               COMPLETENESS: full length.


Расположение РНК[править]

Начало Конец Направление Длина PID Ген COG Комментарий
16877 18428 + 1552 24378532 SMUr01 - 16S ribosomal RNA
18486 18558 + 73 24378532 SMUt01 - 02 Ala tRNA
18817 21717 + 2901 24378532 SMUr02 - 23S ribosomal RNA
21898 22017 + 120 24378532 SMUr03 - 5S ribosomal RNA
22018 22090 + 73 24378532 SMUt02 - 13 Val tRNA
22120 22192 + 73 24378532 SMUt03 - 06 Asp tRNA
22220 22295 + 76 24378532 SMUt04 - 10 Lys tRNA
22302 22383 + 82 24378532 SMUt05 - 15 Leu tRNA
22398 22470 + 73 24378532 SMUt06 - 12 Thr tRNA
22473 22544 + 72 24378532 SMUt07 - 01 Gly tRNA
22552 22637 + 86 24378532 SMUt08 - 15 Leu tRNA
22651 22724 + 74 24378532 SMUt09 - 11 Arg tRNA
22778 22851 + 74 24378532 SMUt10 - 03 Pro tRNA
22857 22930 + 74 24378532 SMUt11 - 16 Met tRNA
22954 23027 + 74 24378532 SMUt12 - 16 Met tRNA
23042 23131 + 90 24378532 SMUt13 - 08 Ser tRNA
23144 23217 + 74 24378532 SMUt14 - 16 Met tRNA
23227 23299 + 73 24378532 SMUt15 - 17 Phe tRNA
23306 23376 + 71 24378532 SMUt16 - 01 Gly tRNA
23411 23484 + 74 24378532 SMUt17 - 14 Ile tRNA
23494 23581 + 88 24378532 SMUt18 - 08 Ser tRNA
100332 100417 + 86 24378532 SMUt19 - 15 Leu tRNA
108558 108630 + 73 24378532 SMUt20 - 12 Thr tRNA
185749 187300 + 1552 24378532 SMUr04 - 16S ribosomal RNA
187358 187430 + 73 24378532 SMUt21 - 02 Ala tRNA
187689 190589 + 2901 24378532 SMUr05 - 23S ribosomal RNA
190770 190889 + 120 24378532 SMUr06 - 5S ribosomal RNA
190890 190962 + 73 24378532 SMUt22 - 13 Val tRNA
190968 191038 + 71 24378532 SMUt23 - 01 Gly tRNA
191073 191146 + 74 24378532 SMUt24 - 14 Ile tRNA
191158 191229 + 72 24378532 SMUt25 - 04 Glu tRNA
191244 191333 + 90 24378532 SMUt26 - 08 Ser tRNA
191346 191419 + 74 24378532 SMUt27 - 16 Met tRNA
191429 191504 + 76 24378532 SMUt28 - 17 Phe tRNA
191517 191597 + 81 24378532 SMUt29 - 18 Tyr tRNA
191604 191674 + 71 24378532 SMUt30 - 20 Trp tRNA
191688 191760 + 73 24378532 SMUt31 - 09 His tRNA
191777 191848 + 72 24378532 SMUt32 - 05 Gln tRNA
191863 191946 + 84 24378532 SMUt33 - 15 Leu tRNA
328109 328197 - 89 24378532 SMUt34 - 08 Ser tRNA
328360 328442 - 83 24378532 SMUt35 - 15 Leu tRNA
390169 390255 + 87 24378532 SMUt36 - 08 Ser tRNA
1140675 1140746 - 72 24378532 SMUt37 - 11 Arg tRNA
1142213 1142287 - 75 24378532 SMUt38 - 05 Gln tRNA
1142444 1142524 - 81 24378532 SMUt39 - 18 Tyr tRNA
1211962 1212033 - 72 24378532 SMUt40 - 11 Arg tRNA
1654785 1654858 - 74 24378532 SMUt41 - 03 Pro tRNA
1654911 1654984 - 74 24378532 SMUt42 - 11 Arg tRNA
1654998 1655083 - 86 24378532 SMUt43 - 15 Leu tRNA
1655091 1655162 - 72 24378532 SMUt44 - 01 Gly tRNA
1655165 1655237 - 73 24378532 SMUt45 - 12 Thr tRNA
1655252 1655333 - 82 24378532 SMUt46 - 15 Leu tRNA
1655340 1655415 - 76 24378532 SMUt47 - 10 Lys tRNA
1655443 1655515 - 73 24378532 SMUt48 - 06 Asp tRNA
1655545 1655617 - 73 24378532 SMUt49 - 13 Val tRNA
1655618 1655737 - 120 24378532 SMUr07 - 5S ribosomal RNA
1655918 1658818 - 2901 24378532 SMUr08 - 23S ribosomal RNA
1659077 1659149 - 73 24378532 SMUt50 - 02 Ala tRNA
1659207 1660758 - 1552 24378532 SMUr09 - 16S ribososmal RNA
1678247 1678317 + 71 24378532 SMUt51 - 12 Thr tRNA
1683393 1683464 - 72 24378532 SMUt52 -
1683467 1683539 - 73 24378532 SMUt53 - 12 Thr tRNA
1683554 1683635 - 82 24378532 SMUt54 - 15 Leu tRNA
1683642 1683717 - 76 24378532 SMUt55 - 10 Lys tRNA
1683745 1683817 - 73 24378532 SMUt56 - 06 Asp tRNA
1683847 1683919 - 73 24378532 SMUt57 - 13 Val tRNA
1683920 1684039 - 120 24378532 SMUr10 - 5S ribosomal RNA
1684220 1687120 - 2901 24378532 SMUr11 - 23S ribosomal RNA
1687379 1687451 - 73 24378532 SMUt58 - 02 Ala tRNA
1687509 1689060 - 1552 24378532 SMUr12 - 16S ribosomal RNA
1873122 1873195 - 74 24378532 SMUt59 - 07 Asn tRNA
1873197 1873316 - 120 24378532 SMUr13 - 5S ribosomal RNA
1873497 1876397 - 2901 24378532 SMUr14 - 23S ribosomal RNA
1876656 1876728 - 73 24378532 SMUt60 - 02 Ala tRNA
1876786 1878337 - 1552 24378532 SMUr15 - 16S ribosomal RNA
1904603 1904673 + 71 24378532 SMUt61 - 19 Cys tRNA
1928139 1928211 + 73 24378532 SMUt62 - 10 Lys tRNA
2026182 2026255 - 74 24378532 SMUt63 - 07 Asn tRNA
2026261 2026332 - 72 24378532 SMUt64 - 04 Glu tRNA
2026673 2026746 + 74 24378532 SMUt65 - 11 Arg tRNA