Геном прокариот/Материалы:NC 005303

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Эта статья — часть материалов: лаборатории Биоинформатика, исследовательского проекта «Геном прокариот»

   LOCUS       NC_005303             860631 bp    DNA     circular BCT 03-DEC-2005
   DEFINITION  Onion yellows phytoplasma OY-M, complete genome.
   ACCESSION   NC_005303
   VERSION     NC_005303.1  GI:39938486
   KEYWORDS    .
   SOURCE      Onion yellows phytoplasma OY-M
     ORGANISM  Onion yellows phytoplasma OY-M
               Bacteria; Firmicutes; Mollicutes; Acholeplasmatales;
               Acholeplasmataceae; Candidatus Phytoplasma; Candidatus Phytoplasma
               asteris.
   REFERENCE   1  (bases 1 to 860631)
     AUTHORS   Oshima,K., Kakizawa,S., Nishigawa,H., Jung,H.Y., Wei,W., Suzuki,S.,
               Arashida,R., Nakata,D., Miyata,S., Ugaki,M. and Namba,S.
     TITLE     Reductive evolution suggested from the complete genome sequence of
               a plant-pathogenic phytoplasma
     JOURNAL   Nat. Genet. 36 (1), 27-29 (2004)
      PUBMED   14661021
   REFERENCE   2  (bases 1 to 860631)
     AUTHORS   .
     CONSRTM   NCBI Genome Project
     TITLE     Direct Submission
     JOURNAL   Submitted (16-DEC-2003) National Center for Biotechnology
               Information, NIH, Bethesda, MD 20894, USA
   REFERENCE   3  (bases 1 to 860631)
     AUTHORS   Oshima,K., Kakizawa,S., Nishigawa,H., Ugaki,M. and Namba,S.
     TITLE     Direct Submission
     JOURNAL   Submitted (10-DEC-2003) Shigetou Namba, The University of Tokyo,
               Department of Integrated Biosciences, Graduate School of Frontier
               Sciences; 202 Bioscience Bldg., 5-1-5 Kashiwanoha, Kashiwa, Chiba
               277-8562, Japan (E-mail:snamba@ims.u-tokyo.ac.jp,
               Tel:81-4-7136-3700, Fax:81-4-7136-3701)
   COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
               NCBI review. The reference sequence was derived from AP006628.
               COMPLETENESS: full length.

Расположение РНК[править]

Начало	Конец	Направление	Длина	PID	Ген	COG	Комментарий
112684	113103	+	420	39938486	PAMs01	-	ribonuclease P RNA
190713	190797	+	85	39938486	PAMt01	-	^{08 Ser tRNA}
191241	191313	+	73	39938486	PAMt02	-	^{09 His tRNA}
191402	191473	+	72	39938486	PAMt03	-	^{05 Gln tRNA}
191527	191605	+	79	39938486	PAMt04	-	^{15 Leu tRNA}
191629	191700	+	72	39938486	PAMt05	-	^{20 Trp tRNA}
274207	274277	+	71	39938486	PAMt06	-	^{19 Cys tRNA}
274436	274524	+	89	39938486	PAMt07	-	^{08 Ser tRNA}
279196	279276	+	81	39938486	PAMt08	-	^{18 Tyr tRNA}
279394	280928	+	1535	39938486	PAMr01	-	16S ribosomal RNA
280953	284036	+	3084	39938486	PAMr02	-	23S ribosomal RNA
281032	281105	+	74	39938486	PAMt09	-	^{14 Ile tRNA}
284072	284180	+	109	39938486	PAMr03	-	5S ribosomal RNA
284196	284268	+	73	39938486	PAMt10	-	^{13 Val tRNA}
284278	284351	+	74	39938486	PAMt11	-	^{07 Asn tRNA}
311445	311518	+	74	39938486	PAMt12	-	^{11 Arg tRNA}
525428	525509	+	82	39938486	PAMt13	-	^{15 Leu tRNA}
559186	559258	-	73	39938486	PAMt14	-	^{17 Phe tRNA}
559264	559336	-	73	39938486	PAMt15	-	^{06 Asp tRNA}
559345	559418	-	74	39938486	PAMt16	-	^{16 Met tRNA}
559439	559526	-	88	39938486	PAMt17	-	^{08 Ser tRNA}
559537	559610	-	74	39938486	PAMt18	-	^{16 Met tRNA}
559615	559688	-	74	39938486	PAMt19	-	^{16 Met tRNA}
559730	559802	-	73	39938486	PAMt20	-	^{02 Ala tRNA}
559810	559892	-	83	39938486	PAMt21	-	^{15 Leu tRNA}
559962	560034	-	73	39938486	PAMt22	-	^{10 Lys tRNA}
560045	560117	-	73	39938486	PAMt23	-	^{12 Thr tRNA}
560173	560245	-	73	39938486	PAMt24	-	^{13 Val tRNA}
560271	560379	-	109	39938486	PAMr04	-	5S ribosomal RNA
560415	563498	-	3084	39938486	PAMr05	-	23S ribosomal RNA
563346	563419	-	74	39938486	PAMt25	-	^{14 Ile tRNA}
563523	565057	-	1535	39938486	PAMr06	-	16S ribosomal RNA
727848	727919	-	72	39938486	PAMt26	-	^{01 Gly tRNA}
727943	728016	-	74	39938486	PAMt27	-	^{03 Pro tRNA}
728044	728117	-	74	39938486	PAMt28	-	^{11 Arg tRNA}
728134	728206	-	73	39938486	PAMt29	-	^{04 Glu tRNA}
763490	763572	+	83	39938486	PAMt30	-	^{15 Leu tRNA}
769139	769210	-	72	39938486	PAMt31	-	^{01 Gly tRNA}
769233	769303	-	71	39938486	PAMt32	-	^{12 Thr tRNA}