Материалы:NC 005810

Материал из Викиверситета
Вы находитесь в Инкубаторе
Это исходный материал (как правило загружен ботом)

Обработать/использовать материал

   LOCUS       NC_005810            4595065 bp    DNA     circular BCT 09-AUG-2006
   DEFINITION  Yersinia pestis biovar Microtus str. 91001, complete genome.
   ACCESSION   NC_005810
   VERSION     NC_005810.1  GI:45439865
   KEYWORDS    .
   SOURCE      Yersinia pestis biovar Microtus str. 91001
     ORGANISM  Yersinia pestis biovar Microtus str. 91001
               Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales;
               Enterobacteriaceae; Yersinia.
   REFERENCE   1  (bases 1 to 4595065)
     AUTHORS   Zhou,D., Tong,Z., Song,Y., Han,Y., Pei,D., Pang,X., Zhai,J., Li,M.,
               Cui,B., Qi,Z., Jin,L., Dai,R., Du,Z., Wang,J., Guo,Z., Wang,J.,
               Huang,P. and Yang,R.
     TITLE     Genetics of metabolic variations between Yersinia pestis biovars
               and the proposal of a new biovar, microtus
     JOURNAL   J. Bacteriol. 186 (15), 5147-5152 (2004)
      PUBMED   15262951
   REFERENCE   2  (bases 1 to 4595065)
     AUTHORS   Song,Y., Tong,Z., Wang,J., Wang,L., Guo,Z., Han,Y., Zhang,J.,
               Pei,D., Zhou,D., Qin,H., Pang,X., Han,Y., Zhai,J., Li,M., Cui,B.,
               Qi,Z., Jin,L., Dai,R., Chen,F., Li,S., Ye,C., Du,Z., Lin,W.,
               Wang,J., Yu,J., Yang,H., Wang,J., Huang,P. and Yang,R.
     TITLE     Complete genome sequence of Yersinia pestis strain 91001, an
               isolate avirulent to humans
     JOURNAL   DNA Res. 11 (3), 179-197 (2004)
      PUBMED   15368893
   REFERENCE   3  (bases 1 to 4595065)
     CONSRTM   NCBI Genome Project
     TITLE     Direct Submission
     JOURNAL   Submitted (11-SEP-2004) National Center for Biotechnology
               Information, NIH, Bethesda, MD 20894, USA
   REFERENCE   4  (bases 1 to 4595065)
     AUTHORS   Song,Y., Tong,Z., Wang,L., Han,Y., Zhang,J., Pei,D., Wang,J.,
               Zhou,D., Han,Y., Pang,X., Zhai,J., Chen,F., Qin,H., Wang,J., Li,S.,
               Guo,Z., Ye,C., Du,Z., Lin,W., Wang,J., Yu,J., Yang,H., Wang,J.,
               Huang,P. and Yang,R.
     TITLE     Direct Submission
     JOURNAL   Submitted (24-APR-2003) The Institute of Microbiology and
               Epidemiology, Academy of Military Medical Sciences, No. 20,
               Dongdajie Street, Fengtai District, Beijing 100071, People's
               Republic of China
   COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
               NCBI review. The reference sequence was derived from AE017042.
               COMPLETENESS: full length.


Расположение РНК[править]

Начало Конец Направление Длина PID Ген COG Комментарий
12057 13545 + 1489 45439865 YP_r1 - 16S ribosomal RNA
13709 13784 + 76 45439865 YP_t1 - 04 Glu tRNA
14037 16943 + 2907 45439865 YP_r2 - 23S ribosomal RNA
16943 17176 + 234 45439865 YP_r3 - 5S ribosomal RNA
25674 25777 + 104 45439865 YP_s1 -
245028 246516 + 1489 45439865 YP_r4 - 16S ribosomal RNA
246646 246722 + 77 45439865 YP_t2 - 14 Ile tRNA
246774 246849 + 76 45439865 YP_t3 - 02 Ala tRNA
247068 249974 + 2907 45439865 YP_r5 - 23S ribosomal RNA
249974 250207 + 234 45439865 YP_r6 - 5S ribosomal RNA
407609 407701 + 93 45439865 YP_t4 - 08 Ser tRNA
407710 407786 + 77 45439865 YP_t5 - 11 Arg tRNA
407866 407942 + 77 45439865 YP_t6 - 11 Arg tRNA
529782 529857 - 76 45439865 YP_t7 - 17 Phe tRNA
559750 559825 + 76 45439865 YP_t8 - 01 Gly tRNA
624472 624558 + 87 45439865 YP_t9 - 15 Leu tRNA
624619 624695 + 77 45439865 YP_t11 - 16 Met tRNA
690159 690243 + 85 45439865 YP_t12 - 15 Leu tRNA
704161 705649 + 1489 45439865 YP_r7 - 16S ribosomal RNA
705779 705855 + 77 45439865 YP_t13 - 14 Ile tRNA
705907 705982 + 76 45439865 YP_t14 - 02 Ala tRNA
706201 709107 + 2907 45439865 YP_r8 - 23S ribosomal RNA
709107 709340 + 234 45439865 YP_r9 - 5S ribosomal RNA
856952 857071 - 120 45439865 YP_s2 -
927238 927314 + 77 45439865 YP_t15 - 11 Arg tRNA
946731 946807 + 77 45439865 YP_t16 - 03 Pro tRNA
978845 978920 - 76 45439865 YP_t17 - 12 Thr tRNA
978926 979013 - 88 45439865 YP_t18 - 08 Ser tRNA
980775 980916 - 142 45439865 YP_s3 -
1109581 1109650 - 70 45439865 YP_t19 - 10 Lys tRNA
1109679 1109754 - 76 45439865 YP_t20 - 10 Lys tRNA
1109782 1109857 - 76 45439865 YP_t21 - 10 Lys tRNA
1136978 1137341 - 364 45439865 YP_s4 -
1172313 1172389 + 77 45439865 YP_t22 - 16 Met tRNA
1172397 1172481 + 85 45439865 YP_t23 - 15 Leu tRNA
1172511 1172585 + 75 45439865 YP_t24 - 05 Gln tRNA
1172669 1172743 + 75 45439865 YP_t25 - 05 Gln tRNA
1172776 1172852 + 77 45439865 YP_t26 - 16 Met tRNA
1172858 1172932 + 75 45439865 YP_t27 - 05 Gln tRNA
1466614 1466701 + 88 45439865 YP_t28 - 08 Ser tRNA
1623043 1623118 - 76 45439865 YP_t29 - 07 Asn tRNA
1633790 1633865 - 76 45439865 YP_t30 - 07 Asn tRNA
1673973 1674058 - 86 45439865 YP_t31 - 15 Leu tRNA
1674069 1674142 - 74 45439865 YP_t32 - 19 Cys tRNA
1674195 1674270 - 76 45439865 YP_t33 - 01 Gly tRNA
1680719 1680794 - 76 45439865 YP_t34 - 10 Lys tRNA
1828031 1828106 - 76 45439865 YP_t35 - 07 Asn tRNA
2081356 2081445 - 90 45439865 YP_t36 - 08 Ser tRNA
2089764 2089853 - 90 45439865 YP_t37 - 08 Ser tRNA
2189908 2189992 - 85 45439865 YP_t38 - 18 Tyr tRNA
2425287 2425363 + 77 45439865 YP_t39 - 13 Val tRNA
2425423 2425499 + 77 45439865 YP_t40 - 13 Val tRNA
2701189 2701263 - 75 45439865 YP_t41 - 11 Arg tRNA
2892010 2892085 - 76 45439865 YP_t42 - 10 Lys tRNA
2892285 2892360 - 76 45439865 YP_t43 - 13 Val tRNA
2892405 2892480 - 76 45439865 YP_t44 - 13 Val tRNA
2892517 2892592 - 76 45439865 YP_t45 - 13 Val tRNA
2894514 2894589 + 76 45439865 YP_t46 - 02 Ala tRNA
3072909 3072985 - 77 45439865 YP_t47 - 06 Asp tRNA
3080280 3080356 - 77 45439865 YP_t48 - 06 Asp tRNA
3080474 3080707 - 234 45439865 YP_r10 - 5S ribosomal RNA
3080707 3083613 - 2907 45439865 YP_r11 - 23S ribosomal RNA
3083866 3083941 - 76 45439865 YP_t49 - 04 Glu tRNA
3084105 3085593 - 1489 45439865 YP_r12 - 16S ribosomal RNA
3125728 3126009 - 282 45439865 YP_s5 -
3137997 3138073 + 77 45439865 YP_t50 - 16 Met tRNA
3138197 3138273 + 77 45439865 YP_t51 - 16 Met tRNA
3291134 3291210 - 77 45439865 YP_t52 - 16 Met tRNA
3435670 3435801 - 132 45439865 YP_r13 - partial 5S rRNA, lacking the first 102 bases
3435834 3435909 - 76 45439865 YP_t53 - 12 Thr tRNA
3435918 3436150 - 233 45439865 YP_r14 - 5S ribosomal RNA
3436150 3439056 - 2907 45439865 YP_r15 - 23S ribosomal RNA
3439275 3439350 - 76 45439865 YP_t54 - 02 Ala tRNA
3439402 3439478 - 77 45439865 YP_t55 - 14 Ile tRNA
3439608 3441096 - 1489 45439865 YP_r16 - 16S ribosomal RNA
3471054 3471129 - 76 45439865 YP_56 - 12 Thr tRNA
3471136 3471210 - 75 45439865 YP_57 - 01 Gly tRNA
3471360 3471444 - 85 45439865 YP_58 - 18 Tyr tRNA
3471463 3471538 - 76 45439865 YP_59 - 12 Thr tRNA
3501166 3501399 - 234 45439865 YP_r17 - 5S ribosomal RNA
3501399 3504305 - 2907 45439865 YP_r18 - 23S ribosomal RNA
3504558 3504633 - 76 45439865 YP_t60 - 04 Glu tRNA
3504797 3506285 - 1489 45439865 YP_r19 - 16S ribosomal RNA
3506403 3506479 + 77 45439865 YP_t61 - 06 Asp tRNA
3506488 3506563 + 76 45439865 YP_t62 - 20 Trp tRNA
3563835 3563911 + 77 45439865 YP_t63 - 11 Arg tRNA
3563995 3564070 + 76 45439865 YP_t64 - 09 His tRNA
3564087 3564173 + 87 45439865 YP_t65 - 15 Leu tRNA
3564249 3564325 + 77 45439865 YP_t66 - 03 Pro tRNA
3665549 3665772 - 224 45439865 YP_r20 - 5S ribosomal RNA
3665772 3668678 - 2907 45439865 YP_r21 - 23S ribosomal RNA
3668897 3668972 - 76 45439865 YP_t67 - 02 Ala tRNA
3669024 3669100 - 77 45439865 YP_t68 - 14 Ile tRNA
3669230 3670718 - 1489 45439865 YP_r22 - 16S ribosomal RNA
3776472 3776548 - 77 45439865 YP_t69 - 03 Pro tRNA
3806782 3806872 - 91 45439865 YP_t70 - Sec tRNA
3955266 3955341 - 76 45439865 YP_t71 - 17 Phe tRNA
4076418 4076491 - 74 45439865 YP_t72 - 01 Gly tRNA
4106951 4107132 + 182 45439865 YP_s6 -
4277617 4277703 + 87 45439865 YP_t73 - 15 Leu tRNA
4327256 4327632 + 377 45439865 YP_s7 -