Геном прокариот/Материалы:NC 006087

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Эта статья — часть материалов: лаборатории Биоинформатика, исследовательского проекта «Геном прокариот»

   LOCUS       NC_006087            2584158 bp    DNA     circular BCT 03-APR-2006
   DEFINITION  Leifsonia xyli subsp. xyli str. CTCB07, complete genome.
   ACCESSION   NC_006087
   VERSION     NC_006087.1  GI:50953925
   KEYWORDS    .
   SOURCE      Leifsonia xyli subsp. xyli str. CTCB07
     ORGANISM  Leifsonia xyli subsp. xyli str. CTCB07
               Bacteria; Actinobacteria; Actinobacteridae; Actinomycetales;
               Micrococcineae; Microbacteriaceae; Leifsonia.
   REFERENCE   1  (bases 1 to 2584158)
     AUTHORS   Vitorello,C.B.M., Camargo,L.E.A., Sluys,M.A.V., Kitajima,J.P.,
               Truffi,D., Amaral,A.M., Harakava,R., Franco,J.C., Wood,D.,
               Oliveira,M.C., Miyaki,C., Takita,M.A., Silva,A.C.R., Furlan,L.R.,
               Carraro,D.M., Camarotte,G., Almeida,N.F., Carrer,H., Coutinho,L.L.,
               El-Dorry,H.A., Ferro,M.I.T., Gagliardi,P.R., Giglioti,E.,
               Goldman,M.H.S., Goldman,G.H., Kimura,E.T., Ferro,E.S.,
               Kuramae,E.E., Lemos,E.G.M., Lemos,M.V.F., Mauro,S.M.Z.,
               Machado,M.A., Marino,C.L., Menck,C.F., Nunes,L.R., Oliveira,R.C.,
               Pereira,G.G., Siqueira,W., Souza,A.A., Tsai,S.M., Zanca,A.S.,
               Simpson,A.J.G., Brumbley,S.M. and Setubal,J.C.
     TITLE     The genome sequence of the gram-positive sugarcane pathogen
               Leifsonia xyli subsp. xyli
     JOURNAL   Mol. Plant Microbe Interact. 17 (8), 827-836 (2004)
      PUBMED   15305603
   REFERENCE   2  (bases 1 to 2584158)
     AUTHORS   .
     CONSRTM   NCBI Genome Project
     TITLE     Direct Submission
     JOURNAL   Submitted (21-SEP-2004) National Center for Biotechnology
               Information, NIH, Bethesda, MD 20894, USA
   REFERENCE   3  (bases 1 to 2584158)
     AUTHORS   .
     CONSRTM   NCBI Microbial Genomes Annotation Project
     TITLE     Direct Submission
     JOURNAL   Submitted (23-DEC-2002) National Center for Biotechnology
               Information, NIH, Bethesda, MD 20894, USA
   COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
               NCBI review. The reference sequence was derived from AE016822.
               COMPLETENESS: full length.

Расположение РНК[править]

Начало	Конец	Направление	Длина	PID	Ген	COG	Комментарий
10986	11065	+	80	50953925	Lxx00090	-	^{14 Ile tRNA}
11075	11150	+	76	50953925	Lxx00100	-	^{02 Ala tRNA}
28490	28579	+	90	50953925	Lxx00280	-	^{15 Leu tRNA}
133817	135263	+	1447	50953925	Lxx01380	-	16S ribosomal RNA
135816	138903	+	3088	50953925	Lxx01390	-	23S ribosomal RNA
139040	139203	+	164	50953925	Lxx01400	-	5S ribosomal RNA
161086	161162	-	77	50953925	Lxx01610	-	^{16 Met tRNA}
161194	161271	-	78	50953925	Lxx01620	-	^{12 Thr tRNA}
183370	183457	+	88	50953925	Lxx01890	-	^{18 Tyr tRNA}
216011	216086	-	76	50953925	Lxx02160	-	^{11 Arg tRNA}
232050	232141	-	92	50953925	Lxx02320	-	^{08 Ser tRNA}
232468	232558	-	91	50953925	Lxx02330	-	^{08 Ser tRNA}
290058	290136	+	79	50953925	Lxx02880	-	^{20 Trp tRNA}
334516	334606	-	91	50953925	Lxx03390	-	^{08 Ser tRNA}
360885	360964	-	80	50953925	Lxx03580	-	^{03 Pro tRNA}
414101	414179	+	79	50953925	Lxx04110	-	^{12 Thr tRNA}
585871	585950	+	80	50953925	Lxx05760	-	^{03 Pro tRNA}
603549	603627	+	79	50953925	Lxx05940	-	^{02 Ala tRNA}
675490	675568	-	79	50953925	Lxx06790	-	^{11 Arg tRNA}
791145	791218	-	74	50953925	Lxx07810	-	^{01 Gly tRNA}
791319	791399	+	81	50953925	Lxx07820	-	^{03 Pro tRNA}
821712	821790	+	79	50953925	Lxx08140	-	^{02 Ala tRNA}
828968	829058	-	91	50953925	Lxx08210	-	^{15 Leu tRNA}
870541	870619	+	79	50953925	Lxx08590	-	^{07 Asn tRNA}
874676	874755	+	80	50953925	Lxx08640	-	^{16 Met tRNA}
956662	956741	-	80	50953925	Lxx09310	-	^{16 Met tRNA}
980250	980328	+	79	50953925	Lxx09570	-	^{04 Glu tRNA}
1018072	1018262	-	191	50953925	Lxx09955	-	putative ribonuclease P RNA
1089308	1089386	-	79	50953925	Lxx10620	-	^{13 Val tRNA}
1089574	1089652	+	79	50953925	Lxx10630	-	^{01 Gly tRNA}
1089717	1089790	+	74	50953925	Lxx10640	-	^{19 Cys tRNA}
1089810	1089884	+	75	50953925	Lxx10650	-	^{13 Val tRNA}
1168466	1168555	-	90	50953925	Lxx11380	-	^{15 Leu tRNA}
1320715	1320793	+	79	50953925	Lxx12680	-	^{13 Val tRNA}
1344095	1344173	-	79	50953925	Lxx12900	-	^{11 Arg tRNA}
1359697	1359771	-	75	50953925	Lxx13060	-	^{05 Gln tRNA}
1390092	1390170	-	79	50953925	Lxx13390	-	^{10 Lys tRNA}
1400585	1400978	-	394	50953925	Lxx13468	-	tmRNA
1406516	1406598	+	83	50953925	Lxx13530	-	^{15 Leu tRNA}
1462639	1462717	-	79	50953925	Lxx14140	-	^{09 His tRNA}
1767375	1767454	+	80	50953925	Lxx17020	-	^{15 Leu tRNA}
1810888	1810965	-	78	50953925	Lxx17440	-	^{05 Gln tRNA}
1851490	1851567	-	78	50953925	Lxx17850	-	^{11 Arg tRNA}
1879265	1879343	-	79	50953925	Lxx18170	-	^{12 Thr tRNA}
1910035	1910113	+	79	50953925	Lxx18500	-	^{10 Lys tRNA}
2189596	2189688	-	93	50953925	Lxx21270	-	^{08 Ser tRNA}
2217597	2217672	+	76	50953925	Lxx21560	-	^{04 Glu tRNA}
2217721	2217800	+	80	50953925	Lxx21570	-	^{06 Asp tRNA}
2217856	2217934	+	79	50953925	Lxx21580	-	^{17 Phe tRNA}
2447451	2447527	+	77	50953925	Lxx23840	-	^{01 Gly tRNA}