Геном прокариот/Материалы:NC 006177

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Эта статья — часть материалов: лаборатории Биоинформатика, исследовательского проекта «Геном прокариот»

   LOCUS       NC_006177            3566135 bp    DNA     circular BCT 26-JUN-2007
   DEFINITION  Symbiobacterium thermophilum IAM 14863, complete genome.
   ACCESSION   NC_006177
   VERSION     NC_006177.1  GI:51891138
   KEYWORDS    .
   SOURCE      Symbiobacterium thermophilum IAM 14863
     ORGANISM  Symbiobacterium thermophilum IAM 14863
               Bacteria; Firmicutes; Lactobacillales; Symbiobacterium.
   REFERENCE   1  (bases 1 to 3566135)
     AUTHORS   Ueda,K., Yamashita,A., Ishikawa,J., Shimada,M., Watsuji,T.O.,
               Morimura,K., Ikeda,H., Hattori,M. and Beppu,T.
     TITLE     Genome sequence of Symbiobacterium thermophilum, an uncultivable
               bacterium that depends on microbial commensalism
     JOURNAL   Nucleic Acids Res. 32 (16), 4937-4944 (2004)
      PUBMED   15383646
   REFERENCE   2  (bases 1 to 3566135)
     CONSRTM   NCBI Genome Project
     TITLE     Direct Submission
     JOURNAL   Submitted (07-SEP-2004) National Center for Biotechnology
               Information, NIH, Bethesda, MD 20894, USA
   REFERENCE   3  (bases 1 to 3566135)
     AUTHORS   Hattori,M., Yamashita,A., Toh,H., Oshima,K. and Shiba,T.
     TITLE     Direct Submission
     JOURNAL   Submitted (20-APR-2004) Kitasato Institute for Life Sciences,
               1-15-1, Kitasato, Sagamihara, Kanagawa 228-8555, Japan
   COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
               NCBI review. The reference sequence was derived from AP006840.
               COMPLETENESS: full length.

Расположение РНК[править]

Начало	Конец	Направление	Длина	PID	Ген	COG	Комментарий
13761	13854	+	94	51891138	STH5401	-	^{08 Ser tRNA}
21144	22715	+	1572	51891138	STH5001	-	16S ribosomal RNA
22932	25880	+	2949	51891138	STH5002	-	23S ribosomal RNA
25926	26039	+	114	51891138	STH5003	-	5S ribosomal RNA
26093	26170	+	78	51891138	STH5402	-	^{07 Asn tRNA}
26171	26249	+	79	51891138	STH5403	-	^{01 Gly tRNA}
26253	26332	+	80	51891138	STH5404	-	^{16 Met tRNA}
26425	26503	+	79	51891138	STH5405	-	^{17 Phe tRNA}
26506	26593	+	88	51891138	STH5406	-	^{18 Tyr tRNA}
26597	26675	+	79	51891138	STH5407	-	^{01 Gly tRNA}
26680	26758	+	79	51891138	STH5408	-	^{13 Val tRNA}
26872	26951	+	80	51891138	STH5409	-	^{06 Asp tRNA}
26954	27047	+	94	51891138	STH5410	-	^{15 Leu tRNA}
27048	27127	+	80	51891138	STH5411	-	^{14 Ile tRNA}
27143	27221	+	79	51891138	STH5412	-	^{12 Thr tRNA}
27218	27310	+	93	51891138	STH5413	-	^{08 Ser tRNA}
288165	289736	+	1572	51891138	STH5004	-	16S ribosomal RNA
290021	292969	+	2949	51891138	STH5005	-	23S ribosomal RNA
293015	293128	+	114	51891138	STH5006	-	5S ribosomal RNA
293130	293208	+	79	51891138	STH5414	-	^{10 Lys tRNA}
293211	293289	+	79	51891138	STH5415	-	^{04 Glu tRNA}
293312	293391	+	80	51891138	STH5416	-	^{16 Met tRNA}
293394	293472	+	79	51891138	STH5417	-	^{17 Phe tRNA}
293475	293562	+	88	51891138	STH5418	-	^{18 Tyr tRNA}
293566	293644	+	79	51891138	STH5419	-	^{01 Gly tRNA}
293649	293727	+	79	51891138	STH5420	-	^{02 Ala tRNA}
293756	293834	+	79	51891138	STH5421	-	^{13 Val tRNA}
293851	293930	+	80	51891138	STH5422	-	^{06 Asp tRNA}
293933	294026	+	94	51891138	STH5423	-	^{15 Leu tRNA}
294073	294151	+	79	51891138	STH5424	-	^{12 Thr tRNA}
294152	294231	+	80	51891138	STH5425	-	^{14 Ile tRNA}
294238	294317	+	80	51891138	STH5426	-	^{16 Met tRNA}
294624	296195	+	1572	51891138	STH5007	-	16S ribosomal RNA
296481	299430	+	2950	51891138	STH5008	-	23S ribosomal RNA
299476	299589	+	114	51891138	STH5009	-	5S ribosomal RNA
299693	299806	+	114	51891138	STH_r01	-	5S ribosomal RNA
383018	383097	+	80	51891138	STH5427	-	^{03 Pro tRNA}
383131	383207	+	77	51891138	STH5428	-	^{01 Gly tRNA}
383333	383411	+	79	51891138	STH5429	-	^{11 Arg tRNA}
383442	383521	+	80	51891138	STH5430	-	^{09 His tRNA}
383524	383602	+	79	51891138	STH5431	-	^{05 Gln tRNA}
383640	383717	+	78	51891138	STH5432	-	^{10 Lys tRNA}
384305	384392	+	88	51891138	STH5433	-	^{15 Leu tRNA}
643194	643271	+	78	51891138	STH5434	-	^{07 Asn tRNA}
643358	643436	+	79	51891138	STH5435	-	^{16 Met tRNA}
841220	841299	+	80	51891138	STH5436	-	^{16 Met tRNA}
841439	841517	+	79	51891138	STH5437	-	^{02 Ala tRNA}
841521	841613	+	93	51891138	STH5438	-	^{08 Ser tRNA}
841656	841734	+	79	51891138	STH5439	-	^{10 Lys tRNA}
841737	841815	+	79	51891138	STH5440	-	^{04 Glu tRNA}
841822	841913	+	92	51891138	STH5441	-	^{08 Ser tRNA}
841921	841997	+	77	51891138	STH5442	-	^{05 Gln tRNA}
842000	842077	+	78	51891138	STH5443	-	^{07 Asn tRNA}
842078	842156	+	79	51891138	STH5444	-	^{01 Gly tRNA}
842160	842238	+	79	51891138	STH5445	-	^{02 Ala tRNA}
842270	842348	+	79	51891138	STH5446	-	^{13 Val tRNA}
842499	842578	+	80	51891138	STH5447	-	^{06 Asp tRNA}
842815	844386	+	1572	51891138	STH5010	-	16S ribosomal RNA
844671	847619	+	2949	51891138	STH5011	-	23S ribosomal RNA
847663	847776	+	114	51891138	STH5012	-	5S ribosomal RNA
956036	956125	-	90	51891138	STH5448	-	^{15 Leu tRNA}
1134844	1134923	-	80	51891138	STH5449	-	^{11 Arg tRNA}
1233154	1233230	+	77	51891138	STH5450	-	^{01 Gly tRNA}
1233231	1233309	+	79	51891138	STH5451	-	^{10 Lys tRNA}
1233363	1233442	+	80	51891138	STH5452	-	^{06 Asp tRNA}
1233461	1233539	+	79	51891138	STH5453	-	^{02 Ala tRNA}
1233572	1233651	+	80	51891138	STH5454	-	^{11 Arg tRNA}
1233655	1233748	+	94	51891138	STH5455	-	^{08 Ser tRNA}
1233785	1233864	+	80	51891138	STH5456	-	^{03 Pro tRNA}
1233970	1234049	+	80	51891138	STH5457	-	^{03 Pro tRNA}
1949484	1949561	+	78	51891138	STH5458	-	^{13 Val tRNA}
2130102	2130195	-	94	51891138	STH5459	-	^{15 Leu tRNA}
2130270	2130348	-	79	51891138	STH5460	-	^{02 Ala tRNA}
2130351	2130429	-	79	51891138	STH5461	-	^{17 Phe tRNA}
2275983	2276060	-	78	51891138	STH5462	-	^{19 Cys tRNA}
2276063	2276142	-	80	51891138	STH5463	-	^{14 Ile tRNA}
2569087	2569165	-	79	51891138	STH5464	-	^{14 Ile tRNA}
2569203	2569281	-	79	51891138	STH5465	-	^{12 Thr tRNA}
2569285	2569363	-	79	51891138	STH5466	-	^{10 Lys tRNA}
2660791	2660876	-	86	51891138	STH5467	-	^{15 Leu tRNA}
2660926	2661003	-	78	51891138	STH5468	-	^{13 Val tRNA}
2661007	2661094	-	88	51891138	STH5469	-	^{18 Tyr tRNA}
2754884	2754961	-	78	51891138	STH5470	-	^{19 Cys tRNA}
2763473	2763551	-	79	51891138	STH5471	-	^{13 Val tRNA}
2784272	2784369	-	98	51891138	STH5472	-	Sec tRNA
2949990	2950069	-	80	51891138	STH5473	-	^{03 Pro tRNA}
2950147	2950226	-	80	51891138	STH5474	-	^{03 Pro tRNA}
2950230	2950308	-	79	51891138	STH5475	-	^{02 Ala tRNA}
2950310	2950389	-	80	51891138	STH5476	-	^{09 His tRNA}
2950395	2950473	-	79	51891138	STH5477	-	^{20 Trp tRNA}
2950478	2950556	-	79	51891138	STH5478	-	^{11 Arg tRNA}
2950559	2950638	-	80	51891138	STH5479	-	^{11 Arg tRNA}
2950670	2950748	-	79	51891138	STH5480	-	^{12 Thr tRNA}
2950751	2950844	-	94	51891138	STH5481	-	^{15 Leu tRNA}
2950846	2950932	-	87	51891138	STH5482	-	^{15 Leu tRNA}
2950977	2951055	-	79	51891138	STH5483	-	^{04 Glu tRNA}
2951058	2951134	-	77	51891138	STH5484	-	^{05 Gln tRNA}
2951245	2951358	-	114	51891138	STH5015	-	5S ribosomal RNA
2951399	2954347	-	2949	51891138	STH5014	-	23S ribosomal RNA
2954633	2956204	-	1572	51891138	STH5013	-	16S ribosomal RNA
3046212	3046305	-	94	51891138	STH5485	-	^{08 Ser tRNA}
3046443	3046536	-	94	51891138	STH5486	-	^{08 Ser tRNA}
3293199	3293277	-	79	51891138	STH5487	-	^{20 Trp tRNA}
3293622	3293701	-	80	51891138	STH5488	-	^{16 Met tRNA}
3312975	3313053	-	79	51891138	STH5489	-	^{12 Thr tRNA}
3325635	3325713	+	79	51891138	STH5490	-	^{02 Ala tRNA}
3353785	3353863	-	79	51891138	STH5491	-	^{02 Ala tRNA}
3413900	3413978	-	79	51891138	STH5492	-	^{04 Glu tRNA}
3440821	3440910	-	90	51891138	STH5493	-	^{15 Leu tRNA}
3464421	3464499	-	79	51891138	STH5494	-	^{11 Arg tRNA}
3464580	3464658	-	79	51891138	STH5495	-	^{04 Glu tRNA}
3464661	3464738	-	78	51891138	STH5496	-	^{13 Val tRNA}
3464801	3464914	-	114	51891138	STH5018	-	5S ribosomal RNA
3464955	3467903	-	2949	51891138	STH5017	-	23S ribosomal RNA
3468121	3469692	-	1572	51891138	STH5016	-	16S ribosomal RNA
3541335	3541413	-	79	51891138	STH5497	-	^{12 Thr tRNA}
3541446	3541522	-	77	51891138	STH5498	-	^{01 Gly tRNA}