Геном прокариот/Материалы:NC 007512

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   LOCUS       NC_007512            2364842 bp    DNA     circular BCT 31-MAR-2006
   DEFINITION  Pelodictyon luteolum DSM 273, complete genome.
   ACCESSION   NC_007512
   VERSION     NC_007512.1  GI:78185892
   KEYWORDS    .
   SOURCE      Pelodictyon luteolum DSM 273
     ORGANISM  Pelodictyon luteolum DSM 273
               Bacteria; Chlorobi; Chlorobia; Chlorobiales; Chlorobiaceae;
               Chlorobium/Pelodictyon group; Pelodictyon.
   REFERENCE   1  (bases 1 to 2364842)
     AUTHORS   Copeland,A., Lucas,S., Lapidus,A., Barry,K., Detter,J.C.,
               Glavina,T., Hammon,N., Israni,S., Pitluck,S., Bryant,D.,
               Schmutz,J., Larimer,F., Land,M., Kyrpides,N., Ivanova,N. and
               Richardson,P.
     CONSRTM   US DOE Joint Genome Institute
     TITLE     Complete sequence of Pelodictyon luteolum DSM 273
     JOURNAL   Unpublished
   REFERENCE   2  (bases 1 to 2364842)
     CONSRTM   NCBI Genome Project
     TITLE     Direct Submission
     JOURNAL   Submitted (27-OCT-2005) National Center for Biotechnology
               Information, NIH, Bethesda, MD 20894, USA
   REFERENCE   3  (bases 1 to 2364842)
     AUTHORS   Copeland,A., Lucas,S., Lapidus,A., Barry,K., Detter,J.C.,
               Glavina,T., Hammon,N., Israni,S., Pitluck,S., Bryant,D.,
               Schmutz,J., Larimer,F., Land,M., Ivanova,N. and Richardson,P.
     TITLE     Direct Submission
     JOURNAL   Submitted (08-AUG-2005) US DOE Joint Genome Institute, 2800
               Mitchell Drive B100, Walnut Creek, CA 94598-1698, USA
   COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
               NCBI review. The reference sequence was derived from CP000096.
               URL -- http://www.jgi.doe.gov
               Source DNA available from Don Bryant (dab14@psu.edu)
               Bacteria available from DSMZ: DSM 273
               Whole genome sequencing and draft assembly at JGI-PGF
               Finishing done at Penn State University
               Quality assurance done by JGI-Stanford
               Annotation done by JGI-ORNL and JGI-PGF
               Contacts: Paul Richardson (microbes@cuba.jgi-psf.org)
               Finished microbial genomes have been curated to close all gaps with
               greater than 98% coverage of at least two independent clones. Each
               base pair has a minimum q (quality) value of 30 and the total error
               rate is less than one per 50000.
               COMPLETENESS: full length.


Расположение РНК[править]

Начало Конец Направление Длина PID Ген COG Комментарий
27006 27078 - 73 78185892 Plut_R0048 - 12 Thr tRNA
82719 82792 + 74 78185892 Plut_R0001 - 13 Val tRNA
107760 109122 + 1363 78185892 Plut_R0049 - 16S ribosomal RNA
109367 109443 + 77 78185892 Plut_R0002 - 14 Ile tRNA
109483 109558 + 76 78185892 Plut_R0003 - 02 Ala tRNA
109699 112448 + 2750 78185892 Plut_R0050 - 23S ribosomal RNA
112721 112830 + 110 78185892 Plut_R0051 - 5S ribosomal RNA
116732 118095 + 1364 78185892 Plut_R0052 - 16S ribosomal RNA
118340 118416 + 77 78185892 Plut_R0004 - 14 Ile tRNA
118456 118531 + 76 78185892 Plut_R0005 - 02 Ala tRNA
118672 121421 + 2750 78185892 Plut_R0053 - 23S ribosomal RNA
121694 121803 + 110 78185892 Plut_R0054 - 5S ribosomal RNA
148563 148637 - 75 78185892 Plut_R0047 - 07 Asn tRNA
193418 193490 + 73 78185892 Plut_R0006 - 01 Gly tRNA
345943 346020 - 78 78185892 Plut_R0046 - 06 Asp tRNA
503406 503481 - 76 78185892 Plut_R0045 - 02 Ala tRNA
595182 595255 + 74 78185892 Plut_R0007 - 13 Val tRNA
623735 623821 - 87 78185892 Plut_R0044 - 08 Ser tRNA
625153 625228 - 76 78185892 Plut_R0043 - 01 Gly tRNA
655439 655511 - 73 78185892 Plut_R0042 - 05 Gln tRNA
656539 656615 - 77 78185892 Plut_R0041 - 11 Arg tRNA
656666 656739 - 74 78185892 Plut_R0040 - 04 Glu tRNA
656769 656842 - 74 78185892 Plut_R0039 - 16 Met tRNA
690039 690115 - 77 78185892 Plut_R0038 - 10 Lys tRNA
773759 773833 + 75 78185892 Plut_R0008 - 05 Gln tRNA
826324 826396 + 73 78185892 Plut_R0009 - 03 Pro tRNA
826422 826497 + 76 78185892 Plut_R0010 - 11 Arg tRNA
826529 826604 + 76 78185892 Plut_R0011 - 09 His tRNA
826613 826684 + 72 78185892 Plut_R0012 - 04 Glu tRNA
834840 834914 + 75 78185892 Plut_R0013 - 10 Lys tRNA
852974 853060 - 87 78185892 Plut_R0037 - 15 Leu tRNA
853071 853155 - 85 78185892 Plut_R0036 - 15 Leu tRNA
908983 909069 + 87 78185892 Plut_R0014 - 08 Ser tRNA
909159 909244 + 86 78185892 Plut_R0015 - 08 Ser tRNA
909256 909348 + 93 78185892 Plut_R0016 - 08 Ser tRNA
1029358 1029434 - 77 78185892 Plut_R0035 - 13 Val tRNA
1105965 1106038 - 74 78185892 Plut_R0034 - 19 Cys tRNA
1345016 1345091 - 76 78185892 Plut_R0033 - 16 Met tRNA
1450838 1450910 - 73 78185892 Plut_R0032 - 03 Pro tRNA
1450926 1450998 - 73 78185892 Plut_R0031 - 11 Arg tRNA
1489391 1489467 + 77 78185892 Plut_R0017 - 16 Met tRNA
1491943 1492018 + 76 78185892 Plut_R0018 - 01 Gly tRNA
1525362 1525446 + 85 78185892 Plut_R0019 - 15 Leu tRNA
1928051 1928123 - 73 78185892 Plut_R0030 - 17 Phe tRNA
1965126 1965207 - 82 78185892 Plut_R0029 - 15 Leu tRNA
1965241 1965316 - 76 78185892 Plut_R0028 - 10 Lys tRNA
2142997 2143085 + 89 78185892 Plut_R0020 - 15 Leu tRNA
2158066 2158139 - 74 78185892 Plut_R0027 - 03 Pro tRNA
2191048 2191120 - 73 78185892 Plut_R0026 - 20 Trp tRNA
2191138 2191213 - 76 78185892 Plut_R0025 - 12 Thr tRNA
2191238 2191320 - 83 78185892 Plut_R0024 - 18 Tyr tRNA
2191333 2191405 - 73 78185892 Plut_R0023 - 12 Thr tRNA
2205241 2205313 - 73 78185892 Plut_R0022 - 11 Arg tRNA
2327937 2328009 - 73 78185892 Plut_R0021 - 02 Ala tRNA