Геном прокариот/Материалы:NC 007604

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   LOCUS       NC_007604            2695903 bp    DNA     circular BCT 08-JUN-2007
   DEFINITION  Synechococcus elongatus PCC 7942, complete genome.
   ACCESSION   NC_007604
   VERSION     NC_007604.1  GI:81298811
   KEYWORDS    .
   SOURCE      Synechococcus elongatus PCC 7942
     ORGANISM  Synechococcus elongatus PCC 7942
               Bacteria; Cyanobacteria; Chroococcales; Synechococcus.
   REFERENCE   1  (bases 1 to 2695903)
     AUTHORS   Copeland,A., Lucas,S., Lapidus,A., Barry,K., Detter,J.C.,
               Glavina,T., Hammon,N., Israni,S., Pitluck,S., Schmutz,J.,
               Larimer,F., Land,M., Kyrpides,N., Lykidis,A. and Richardson,P.
     CONSRTM   US DOE Joint Genome Institute
     TITLE     Complete sequence of chromosome 1 of Synechococcus elongatus PCC
               7942
     JOURNAL   Unpublished
   REFERENCE   2  (bases 1 to 2695903)
     CONSRTM   NCBI Genome Project
     TITLE     Direct Submission
     JOURNAL   Submitted (10-NOV-2005) National Center for Biotechnology
               Information, NIH, Bethesda, MD 20894, USA
   REFERENCE   3  (bases 1 to 2695903)
     AUTHORS   Copeland,A., Lucas,S., Lapidus,A., Barry,K., Detter,J.C.,
               Glavina,T., Hammon,N., Israni,S., Pitluck,S., Schmutz,J.,
               Larimer,F., Land,M., Lykidis,A. and Richardson,P.
     CONSRTM   US DOE Joint Genome Institute
     TITLE     Direct Submission
     JOURNAL   Submitted (08-AUG-2005) US DOE Joint Genome Institute, 2800
               Mitchell Drive B100, Walnut Creek, CA 94598-1698, USA
   COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
               NCBI review. The reference sequence was derived from CP000100.
               URL -- http://www.jgi.doe.gov
               Source DNA and bacteria available from Susan Golden
               (sgolden@tamu.edu)
               Whole genome sequencing and draft assembly at JGI-PGF
               Finishing done by JGI-PGF
               Quality assurance done by JGI-Stanford
               Annotation done by JGI-ORNL and JGI-PGF
               Contacts: Paul Richardson (microbes@cuba.jgi-psf.org)
               Finished microbial genomes have been curated to close all gaps with
               greater than 98% coverage of at least two independent clones. Each
               base pair has a minimum q (quality) value of 30 and the total error
               rate is less than one per 50000.
               COMPLETENESS: full length.


Расположение РНК[править]

Начало Конец Направление Длина PID Ген COG Комментарий
87725 87796 - 72 81298811 Synpcc7942_R0025 - 07 Asn tRNA
121282 121352 + 71 81298811 Synpcc7942_R0026 - 19 Cys tRNA
123940 124013 + 74 81298811 Synpcc7942_R0027 - 19 Cys tRNA
166532 166608 + 77 81298811 Synpcc7942_R0028 - 16 Met tRNA
219927 220000 + 74 81298811 Synpcc7942_R0029 - 03 Pro tRNA
288160 288232 - 73 81298811 Synpcc7942_R0030 - 02 Ala tRNA
424911 424984 - 74 81298811 Synpcc7942_R0031 - 11 Arg tRNA
555218 555288 + 71 81298811 Synpcc7942_R0032 - 01 Gly tRNA
568589 570078 + 1490 81298811 Synpcc7942_R0004 - 16S ribosomal RNA
570240 570316 + 77 81298811 Synpcc7942_R0033 - 14 Ile tRNA
570347 570422 + 76 81298811 Synpcc7942_R0034 - 02 Ala tRNA
570624 573501 + 2878 81298811 Synpcc7942_R0005 - 23S ribosomal RNA
573572 573686 + 115 81298811 Synpcc7942_R0006 - 5S ribosomal RNA
587716 587787 + 72 81298811 Synpcc7942_R0035 - 16 Met tRNA
620372 620443 + 72 81298811 Synpcc7942_R0037 - 05 Gln tRNA
673441 673512 + 72 81298811 Synpcc7942_R0038 - 13 Val tRNA
709609 709692 - 84 81298811 Synpcc7942_R0039 - 15 Leu tRNA
711226 711312 + 87 81298811 Synpcc7942_R0040 - 15 Leu tRNA
908331 908402 + 72 81298811 Synpcc7942_R0041 - 12 Thr tRNA
923151 923235 + 85 81298811 Synpcc7942_R0042 - 18 Tyr tRNA
923243 923317 + 75 81298811 Synpcc7942_R0043 - 12 Thr tRNA
989340 989730 - 391 81298811 Synpcc7942_R0017 - tmRNA
1170702 1170775 - 74 81298811 Synpcc7942_R0044 - 03 Pro tRNA
1174969 1175042 + 74 81298811 Synpcc7942_R0045 - 03 Pro tRNA
1248477 1248551 - 75 81298811 Synpcc7942_R0046 - 13 Val tRNA
1421238 1421319 - 82 81298811 Synpcc7942_R0048 - 15 Leu tRNA
1496904 1496975 + 72 81298811 Synpcc7942_R0049 - 10 Lys tRNA
1557246 1557317 + 72 81298811 Synpcc7942_R0053 - 13 Val tRNA
1622798 1622869 - 72 81298811 Synpcc7942_R0001 - 01 Gly tRNA
1712986 1713297 + 312 81298811 Synpcc7942_R0036 - RNA component of RNaseP
2025281 2025365 + 85 81298811 Synpcc7942_R0002 - 08 Ser tRNA
2085452 2085523 - 72 81298811 Synpcc7942_R0003 - 12 Thr tRNA
2196083 2196155 + 73 81298811 Synpcc7942_R0007 - 04 Glu tRNA
2281200 2281288 - 89 81298811 Synpcc7942_R0008 - 08 Ser tRNA
2309655 2309726 - 72 81298811 Synpcc7942_R0009 - 01 Gly tRNA
2318309 2318381 + 73 81298811 Synpcc7942_R0010 - 11 Arg tRNA
2343582 2343657 + 76 81298811 Synpcc7942_R0011 - 11 Arg tRNA
2379460 2379533 - 74 81298811 Synpcc7942_R0012 - 11 Arg tRNA
2433493 2433568 + 76 81298811 Synpcc7942_R0013 - 09 His tRNA
2447896 2447996 - 101 81298811 Synpcc7942_R0047 - SRP RNA
2478513 2478585 + 73 81298811 Synpcc7942_R0014 - 17 Phe tRNA
2513976 2514057 + 82 81298811 Synpcc7942_R0015 - 15 Leu tRNA
2538396 2538482 + 87 81298811 Synpcc7942_R0016 - 08 Ser tRNA
2596584 2596656 + 73 81298811 Synpcc7942_R0018 - 02 Ala tRNA
2622812 2622884 + 73 81298811 Synpcc7942_R0019 - 20 Trp tRNA
2623091 2623164 + 74 81298811 Synpcc7942_R0020 - 06 Asp tRNA
2655235 2655349 - 115 81298811 Synpcc7942_R0050 - 5S ribosomal RNA
2655420 2658297 - 2878 81298811 Synpcc7942_R0051 - 23S ribosomal RNA
2658499 2658574 - 76 81298811 Synpcc7942_R0021 - 02 Ala tRNA
2658605 2658681 - 77 81298811 Synpcc7942_R0022 - 14 Ile tRNA
2658843 2660332 - 1490 81298811 Synpcc7942_R0052 - 16S ribosomal RNA
2666838 2666924 - 87 81298811 Synpcc7942_R0023 - 08 Ser tRNA
2676606 2676678 - 73 81298811 Synpcc7942_R0024 - 16 Met tRNA