Геном прокариот/Материалы:NC 008555
(перенаправлено с «Материалы:NC 008555»)
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Базовый уровень статей |
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LOCUS NC_008555 2814130 bp DNA circular BCT 31-OCT-2006
DEFINITION Listeria welshimeri serovar 6b str. SLCC5334, complete genome.
ACCESSION NC_008555
VERSION NC_008555.1 GI:116871422
KEYWORDS .
SOURCE Listeria welshimeri serovar 6b str. SLCC5334
ORGANISM Listeria welshimeri serovar 6b str. SLCC5334
Bacteria; Firmicutes; Bacillales; Listeriaceae; Listeria.
REFERENCE 1
AUTHORS Hain,T., Steinweg,C., Kuenne,C.T., Billion,A., Ghai,R.,
Chatterjee,S.S., Domann,E., Karst,U., Goesmann,A., Bekel,T.,
Bartels,D., Kaiser,O., Meyer,F., Puhler,A., Weisshaar,B.,
Wehland,J., Liang,C., Dandekar,T., Lampidis,R., Kreft,J., Goebel,W.
and Chakraborty,T.
TITLE Whole-Genome Sequence of Listeria welshimeri Reveals Common Steps
in Genome Reduction with Listeria innocua as Compared to Listeria
monocytogenes
JOURNAL J. Bacteriol. 188 (21), 7405-7415 (2006)
PUBMED 16936040
REFERENCE 2 (bases 1 to 2814130)
CONSRTM NCBI Genome Project
TITLE Direct Submission
JOURNAL Submitted (30-OCT-2006) National Center for Biotechnology
Information, NIH, Bethesda, MD 20894, USA
REFERENCE 3 (bases 1 to 2814130)
AUTHORS Hain,T.
TITLE Direct Submission
JOURNAL Submitted (10-MAY-2006) Hain T., Institute for Medical
Microbiology, Justus-Liebig-University, Frankfurter Strasse 107,
35392 Giessen, GERMANY
COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final
NCBI review. The reference sequence was derived from AM263198.
COMPLETENESS: full length.
Расположение РНК
[править]| Начало | Конец | Направление | Длина | PID | Ген | COG | Комментарий |
|---|---|---|---|---|---|---|---|
| 75863 | 75935 | + | 73 | 116871422 | lwe_tRNA_01 | - | 10 Lys tRNA |
| 193888 | 195442 | + | 1555 | 116871422 | lwe_rRNA_0001 | - | 16S ribosomal RNA |
| 195687 | 198617 | + | 2931 | 116871422 | lwe_rRNA_0002 | - | 23S ribosomal RNA |
| 198698 | 198807 | + | 110 | 116871422 | lwe_rRNA_0003 | - | 5S ribosomal RNA |
| 198821 | 198893 | + | 73 | 116871422 | lwe_tRNA_02 | - | 13 Val tRNA |
| 198902 | 198977 | + | 76 | 116871422 | lwe_tRNA_03 | - | 12 Thr tRNA |
| 199018 | 199090 | + | 73 | 116871422 | lwe_tRNA_04 | - | 10 Lys tRNA |
| 199096 | 199177 | + | 82 | 116871422 | lwe_tRNA_05 | - | 15 Leu tRNA |
| 199193 | 199264 | + | 72 | 116871422 | lwe_tRNA_06 | - | 01 Gly tRNA |
| 199286 | 199371 | + | 86 | 116871422 | lwe_tRNA_07 | - | 15 Leu tRNA |
| 199384 | 199457 | + | 74 | 116871422 | lwe_tRNA_08 | - | 11 Arg tRNA |
| 199468 | 199541 | + | 74 | 116871422 | lwe_tRNA_09 | - | 03 Pro tRNA |
| 199561 | 199636 | + | 76 | 116871422 | lwe_tRNA_10 | - | 02 Ala tRNA |
| 199911 | 201465 | + | 1555 | 116871422 | lwe_rRNA_0004 | - | 16S ribosomal RNA |
| 201710 | 204640 | + | 2931 | 116871422 | lwe_rRNA_0005 | - | 23S ribosomal RNA |
| 204721 | 204830 | + | 110 | 116871422 | lwe_rRNA_0006 | - | 5S ribosomal RNA |
| 642591 | 642680 | - | 90 | 116871422 | lwe_tRNA_11 | - | 08 Ser tRNA |
| 914096 | 914183 | + | 88 | 116871422 | lwe_tRNA_12 | - | 08 Ser tRNA |
| 918069 | 918140 | + | 72 | 116871422 | lwe_tRNA_13 | - | 04 Glu tRNA |
| 918167 | 918239 | + | 73 | 116871422 | lwe_tRNA_14 | - | 06 Asp tRNA |
| 943832 | 943902 | + | 71 | 116871422 | lwe_tRNA_15 | - | 01 Gly tRNA |
| 1207526 | 1207599 | + | 74 | 116871422 | lwe_tRNA_16 | - | 11 Arg tRNA |
| 1717453 | 1717524 | - | 72 | 116871422 | lwe_tRNA_17 | - | 04 Glu tRNA |
| 1717530 | 1717620 | - | 91 | 116871422 | lwe_tRNA_18 | - | 08 Ser tRNA |
| 1717656 | 1717728 | - | 73 | 116871422 | lwe_tRNA_19 | - | 07 Asn tRNA |
| 1717735 | 1717808 | - | 74 | 116871422 | lwe_tRNA_20 | - | 14 Ile tRNA |
| 1717835 | 1717905 | - | 71 | 116871422 | lwe_tRNA_21 | - | 01 Gly tRNA |
| 1717930 | 1718002 | - | 73 | 116871422 | lwe_tRNA_22 | - | 09 His tRNA |
| 1718032 | 1718104 | - | 73 | 116871422 | lwe_tRNA_23 | - | 17 Phe tRNA |
| 1718109 | 1718184 | - | 76 | 116871422 | lwe_tRNA_24 | - | 06 Asp tRNA |
| 1718189 | 1718262 | - | 74 | 116871422 | lwe_tRNA_25 | - | 16 Met tRNA |
| 1718304 | 1718393 | - | 90 | 116871422 | lwe_tRNA_26 | - | 08 Ser tRNA |
| 1718416 | 1718489 | - | 74 | 116871422 | lwe_tRNA_27 | - | 16 Met tRNA |
| 1718501 | 1718574 | - | 74 | 116871422 | lwe_tRNA_28 | - | 16 Met tRNA |
| 1718628 | 1718700 | - | 73 | 116871422 | lwe_tRNA_29 | - | 02 Ala tRNA |
| 1718720 | 1718793 | - | 74 | 116871422 | lwe_tRNA_30 | - | 03 Pro tRNA |
| 1718804 | 1718877 | - | 74 | 116871422 | lwe_tRNA_31 | - | 11 Arg tRNA |
| 1718887 | 1718972 | - | 86 | 116871422 | lwe_tRNA_32 | - | 15 Leu tRNA |
| 1718990 | 1719064 | - | 75 | 116871422 | lwe_tRNA_33 | - | 01 Gly tRNA |
| 1719080 | 1719161 | - | 82 | 116871422 | lwe_tRNA_34 | - | 15 Leu tRNA |
| 1719167 | 1719239 | - | 73 | 116871422 | lwe_tRNA_35 | - | 10 Lys tRNA |
| 1719280 | 1719355 | - | 76 | 116871422 | lwe_tRNA_36 | - | 12 Thr tRNA |
| 1719364 | 1719436 | - | 73 | 116871422 | lwe_tRNA_37 | - | 13 Val tRNA |
| 1719450 | 1719559 | - | 110 | 116871422 | lwe_rRNA_0007 | - | 5S ribosomal RNA |
| 1719640 | 1722570 | - | 2931 | 116871422 | lwe_rRNA_0008 | - | 23S ribosomal RNA |
| 1722815 | 1724369 | - | 1555 | 116871422 | lwe_rRNA_0009 | - | 16S ribosomal RNA |
| 1753418 | 1753489 | + | 72 | 116871422 | lwe_tRNA_38 | - | 11 Arg tRNA |
| 1823517 | 1823626 | - | 110 | 116871422 | lwe_rRNA_0010 | - | 5S ribosomal RNA |
| 1823707 | 1826637 | - | 2931 | 116871422 | lwe_rRNA_0011 | - | 23S ribosomal RNA |
| 1826882 | 1828436 | - | 1555 | 116871422 | lwe_rRNA_0012 | - | 16S ribosomal RNA |
| 2135441 | 2135527 | + | 87 | 116871422 | lwe_tRNA_39 | - | 15 Leu tRNA |
| 2187048 | 2187119 | + | 72 | 116871422 | lwe_tRNA_40 | - | 04 Glu tRNA |
| 2187276 | 2187349 | + | 74 | 116871422 | lwe_tRNA_41 | - | 12 Thr tRNA |
| 2187359 | 2187442 | + | 84 | 116871422 | lwe_tRNA_42 | - | 18 Tyr tRNA |
| 2187454 | 2187528 | + | 75 | 116871422 | lwe_tRNA_43 | - | 05 Gln tRNA |
| 2187535 | 2187607 | + | 73 | 116871422 | lwe_tRNA_44 | - | 10 Lys tRNA |
| 2355399 | 2355485 | - | 87 | 116871422 | lwe_tRNA_45 | - | 15 Leu tRNA |
| 2355531 | 2355604 | - | 74 | 116871422 | lwe_tRNA_46 | - | 19 Cys tRNA |
| 2355624 | 2355695 | - | 72 | 116871422 | lwe_tRNA_47 | - | 01 Gly tRNA |
| 2355701 | 2355772 | - | 72 | 116871422 | lwe_tRNA_48 | - | 05 Gln tRNA |
| 2355802 | 2355874 | - | 73 | 116871422 | lwe_tRNA_49 | - | 09 His tRNA |
| 2355890 | 2355963 | - | 74 | 116871422 | lwe_tRNA_50 | - | 20 Trp tRNA |
| 2355971 | 2356054 | - | 84 | 116871422 | lwe_tRNA_51 | - | 18 Tyr tRNA |
| 2356077 | 2356149 | - | 73 | 116871422 | lwe_tRNA_52 | - | 17 Phe tRNA |
| 2356154 | 2356229 | - | 76 | 116871422 | lwe_tRNA_53 | - | 06 Asp tRNA |
| 2356236 | 2356309 | - | 74 | 116871422 | lwe_tRNA_54 | - | 16 Met tRNA |
| 2356331 | 2356406 | - | 76 | 116871422 | lwe_tRNA_55 | - | 13 Val tRNA |
| 2356464 | 2356535 | - | 72 | 116871422 | lwe_tRNA_56 | - | 04 Glu tRNA |
| 2356570 | 2356658 | - | 89 | 116871422 | lwe_tRNA_57 | - | 08 Ser tRNA |
| 2356665 | 2356740 | - | 76 | 116871422 | lwe_tRNA_58 | - | 07 Asn tRNA |
| 2356755 | 2356864 | - | 110 | 116871422 | lwe_rRNA_0013 | - | 5S ribosomal RNA |
| 2356945 | 2359875 | - | 2931 | 116871422 | lwe_rRNA_0014 | - | 23S ribosomal RNA |
| 2360048 | 2360123 | - | 76 | 116871422 | lwe_tRNA_59 | - | 02 Ala tRNA |
| 2360171 | 2360244 | - | 74 | 116871422 | lwe_tRNA_60 | - | 14 Ile tRNA |
| 2360373 | 2361927 | - | 1555 | 116871422 | lwe_rRNA_0015 | - | 16S ribosomal RNA |
| 2451865 | 2451936 | - | 72 | 116871422 | lwe_tRNA_61 | - | 11 Arg tRNA |
| 2578786 | 2578858 | - | 73 | 116871422 | lwe_tRNA_62 | - | 12 Thr tRNA |
| 2578883 | 2578958 | - | 76 | 116871422 | lwe_tRNA_63 | - | 07 Asn tRNA |
| 2578973 | 2579082 | - | 110 | 116871422 | lwe_rRNA_0016 | - | 5S ribosomal RNA |
| 2579163 | 2582093 | - | 2931 | 116871422 | lwe_rRNA_0017 | - | 23S ribosomal RNA |
| 2582266 | 2582341 | - | 76 | 116871422 | lwe_tRNA_64 | - | 02 Ala tRNA |
| 2582389 | 2582462 | - | 74 | 116871422 | lwe_tRNA_65 | - | 14 Ile tRNA |
| 2582591 | 2584145 | - | 1555 | 116871422 | lwe_rRNA_0018 | - | 16S ribosomal RNA |
| 2806196 | 2806268 | + | 73 | 116871422 | lwe_tRNA_66 | - | 13 Val tRNA |