Геном прокариот/Материалы:NC 008687

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   LOCUS       NC_008687            1730097 bp    DNA     circular BCT 09-AUG-2007
   DEFINITION  Paracoccus denitrificans PD1222 chromosome 2, complete sequence.
   ACCESSION   NC_008687
   VERSION     NC_008687.1  GI:119385557
   KEYWORDS    .
   SOURCE      Paracoccus denitrificans PD1222
     ORGANISM  Paracoccus denitrificans PD1222
               Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
               Rhodobacteraceae; Paracoccus.
   REFERENCE   1  (bases 1 to 1730097)
     AUTHORS   Copeland,A., Lucas,S., Lapidus,A., Barry,K., Detter,J.C., Glavina
               del Rio,T., Hammon,N., Israni,S., Dalin,E., Tice,H., Pitluck,S.,
               Munk,A.C., Brettin,T., Bruce,D., Han,C., Tapia,R., Gilna,P.,
               Schmutz,J., Larimer,F., Land,M., Hauser,L., Kyrpides,N.,
               Lykidis,A., Spiro,S., Richardson,D.J., Moir,J.W.B., Ferguson,S.J.,
               van Spanning,R.J.M. and Richardson,P.
     CONSRTM   US DOE Joint Genome Institute
     TITLE     Complete sequence of Chromosome 2 of Paracoccus denitrificans
               PD1222
     JOURNAL   Unpublished
   REFERENCE   2  (bases 1 to 1730097)
     CONSRTM   NCBI Genome Project
     TITLE     Direct Submission
     JOURNAL   Submitted (13-DEC-2006) National Center for Biotechnology
               Information, NIH, Bethesda, MD 20894, USA
   REFERENCE   3  (bases 1 to 1730097)
     AUTHORS   Copeland,A., Lucas,S., Lapidus,A., Barry,K., Detter,J.C., Glavina
               del Rio,T., Hammon,N., Israni,S., Dalin,E., Tice,H., Pitluck,S.,
               Munk,A.C., Brettin,T., Bruce,D., Han,C., Tapia,R., Gilna,P.,
               Schmutz,J., Larimer,F., Land,M., Hauser,L., Kyrpides,N.,
               Lykidis,A., Spiro,S., Richardson,D.J., Moir,J.W.B., Ferguson,S.J.,
               van Spanning,R.J.M. and Richardson,P.
     CONSRTM   US DOE Joint Genome Institute
     TITLE     Direct Submission
     JOURNAL   Submitted (04-DEC-2006) US DOE Joint Genome Institute, 2800
               Mitchell Drive B100, Walnut Creek, CA 94598-1698, USA
   COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
               NCBI review. The reference sequence was derived from CP000490.
               URL -- http://www.jgi.doe.gov
               JGI Project ID: 3634481
               Source DNA and bacteria available from Stephen Spiro
               (stephen.spiro@utdallas.edu)
               Contacts: Stephen Spiro (stephen.spiro@utdallas.edu)
                         Paul Richardson (microbes@cuba.jgi-psf.org)
               Quality assurance done by JGI-Stanford
               Annotation done by JGI-ORNL and JGI-PGF
               Finishing done by JGI-LANL
               Finished microbial genomes have been curated to close all gaps with
               greater than 98% coverage of at least two independent clones. Each
               base pair has a minimum q (quality) value of 30 and the total error
               rate is less than one per 50000.
               The JGI and collaborators endorse the principles for the
               distribution and use of large scale sequencing data adopted by the
               larger genome sequencing community and urge users of this data to
               follow them. It is our intention to publish the work of this
               project in a timely fashion and we welcome collaborative
               interaction on the project and analysis.
               (http://www.genome.gov/page.cfm?pageID=10506376).
               COMPLETENESS: full length.

Расположение РНК

Начало	Конец	Направление	Длина	PID	Ген	COG	Комментарий
141979	143453	+	1475	119385557	Pden_r1	-	16S ribosomal RNA
144166	146983	+	2818	119385557	Pden_r2	-	23S ribosomal RNA
147102	147223	+	122	119385557	Pden_r3	-	5S ribosomal RNA
1470862	1471181	-	320	119385557	Pden_R0055	-