Материалы:NC 008800

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   LOCUS       NC_008800            4615899 bp    DNA     circular BCT 20-JAN-2007
   DEFINITION  Yersinia enterocolitica subsp. enterocolitica 8081, complete
               genome.
   ACCESSION   NC_008800
   VERSION     NC_008800.1  GI:123440403
   KEYWORDS    complete genome.
   SOURCE      Yersinia enterocolitica subsp. enterocolitica 8081
     ORGANISM  Yersinia enterocolitica subsp. enterocolitica 8081
               Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales;
               Enterobacteriaceae; Yersinia.
   REFERENCE   1
     AUTHORS   Thomson,N.R., Howard,S., Wren,B.W., Holden,M.T., Crossman,L.,
               Challis,G.L., Churcher,C., Mungall,K., Brooks,K., Chillingworth,T.,
               Feltwell,T., Abdellah,Z., Hauser,H., Jagels,K., Maddison,M.,
               Moule,S., Sanders,M., Whitehead,S., Quail,M.A., Dougan,G.,
               Parkhill,J. and Prentice,M.B.
     TITLE     The Complete Genome Sequence and Comparative Genome Analysis of the
               High Pathogenicity Yersinia enterocolitica Strain 8081
     JOURNAL   (er) PLoS Genet. 2 (12), E206 (2006)
      PUBMED   17173484
   REFERENCE   2
     AUTHORS   Delihas,N.
     TITLE     Annotation and evolutionary relationships of a small regulatory RNA
               gene micF and its target ompF in Yersinia species
     JOURNAL   (er) BMC Microbiol. 3, 13 (2003)
      PUBMED   12834539
   REFERENCE   3  (bases 1 to 4615899)
     CONSRTM   NCBI Genome Project
     TITLE     Direct Submission
     JOURNAL   Submitted (19-JAN-2007) National Center for Biotechnology
               Information, NIH, Bethesda, MD 20894, USA
   REFERENCE   4  (bases 1 to 4615899)
     AUTHORS   Thomson,N.R.
     TITLE     Direct Submission
     JOURNAL   Submitted (30-JUN-2006) Thomson N.R., Pathogen Sequencing Unit, The
               Wellcome Trust Sanger Institute, Genome Campus, Hinxton, Cambridge,
               CB10 1SA, UNITED KINGDOM
   COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
               NCBI review. The reference sequence was derived from AM286415.
               COMPLETENESS: full length.


Расположение РНК[править]

Начало Конец Направление Длина PID Ген COG Комментарий
17506 18994 + 1489 123440403 YEr001 - 16S ribosomal RNA
19220 19295 + 76 123440403 YEt001 - 04 Glu tRNA
19674 22667 + 2994 123440403 YEr002 - 23S ribosomal RNA
22667 22908 + 242 123440403 YEr003 - 5S ribosomal RNA
30017 30134 + 118 123440403 YEs001 -
31382 31582 + 201 123440403 YEs002 -
157085 157301 + 217 123440403 YEs003 -
160552 162040 + 1489 123440403 YEr004 - 16S ribosomal RNA
162169 162245 + 77 123440403 YEt002 - 14 Ile tRNA
162320 162395 + 76 123440403 YEt003 - 02 Ala tRNA
162741 165734 + 2994 123440403 YEr005 - 23S ribosomal RNA
165734 165970 + 237 123440403 YEr006 - 5S ribosomal RNA
166090 166166 + 77 123440403 YEt004 - 06 Asp tRNA
166220 166295 + 76 123440403 YEt005 - 20 Trp tRNA
217919 217995 + 77 123440403 YEt006 - 11 Arg tRNA
218079 218154 + 76 123440403 YEt007 - 09 His tRNA
218170 218256 + 87 123440403 YEt008 - 15 Leu tRNA
218332 218408 + 77 123440403 YEt009 - 03 Pro tRNA
314127 315615 + 1489 123440403 YEr007 - 16S ribosomal RNA
315840 315915 + 76 123440403 YEt010 - 04 Glu tRNA
316294 319287 + 2994 123440403 YEr008 - 23S ribosomal RNA
319287 319527 + 241 123440403 YEr009 - 5S ribosomal RNA
323856 323931 + 76 123440403 YEt011 - 12 Thr tRNA
323950 324034 + 85 123440403 YEt012 - 18 Tyr tRNA
324050 324207 + 158 123440403 YEs004 -
324352 324426 + 75 123440403 YEt013 - 01 Gly tRNA
324433 324508 + 76 123440403 YEt014 - 12 Thr tRNA
345526 345651 - 126 123440403 YEs005 -
354706 356194 + 1489 123440403 YEr010 - 16S ribosomal RNA
356419 356494 + 76 123440403 YEt015 - 04 Glu tRNA
356873 359866 + 2994 123440403 YEr011 - 23S ribosomal RNA
359866 360103 + 238 123440403 YEr012 - 5S ribosomal RNA
411468 411543 - 76 123440403 YEt016 - 17 Phe tRNA
437336 437411 + 76 123440403 YEt017 - 01 Gly tRNA
437503 437578 + 76 123440403 YEt018 - 01 Gly tRNA
437653 437728 + 76 123440403 YEt019 - 01 Gly tRNA
500681 500767 + 87 123440403 YEt020 - 15 Leu tRNA
500828 500904 + 77 123440403 YEt021 - 16 Met tRNA
507310 507428 + 119 123440403 YEs006 -
507658 507838 - 181 123440403 YEs007 -
579198 579282 + 85 123440403 YEt022 - 15 Leu tRNA
643860 643946 - 87 123440403 YEt023 - 15 Leu tRNA
644011 644097 - 87 123440403 YEt024 - 15 Leu tRNA
687073 687191 + 119 123440403 YEs008 -
739972 740050 - 79 123440403 YEs009 -
962917 963009 + 93 123440403 YEt025 - 08 Ser tRNA
963018 963094 + 77 123440403 YEt026 - 11 Arg tRNA
963153 963229 + 77 123440403 YEt027 - 11 Arg tRNA
966432 966506 - 75 123440403 YEs010 -
1019206 1020694 + 1489 123440403 YEr013 - 16S ribosomal RNA
1020919 1020994 + 76 123440403 YEt028 - 04 Glu tRNA
1021373 1024366 + 2994 123440403 YEr014 - 23S ribosomal RNA
1024366 1024602 + 237 123440403 YEr015 - 5S ribosomal RNA
1024722 1024798 + 77 123440403 YEt029 - 06 Asp tRNA
1049625 1049701 + 77 123440403 YEt030 - 06 Asp tRNA
1116169 1116549 - 381 123440403 YEs011 -
1219794 1219897 + 104 123440403 YEs012 -
1354016 1354091 - 76 123440403 YEt031 - 02 Ala tRNA
1354171 1354246 - 76 123440403 YEt032 - 02 Ala tRNA
1356094 1356169 + 76 123440403 YEt033 - 13 Val tRNA
1356224 1356299 + 76 123440403 YEt034 - 13 Val tRNA
1356339 1356414 + 76 123440403 YEt035 - 13 Val tRNA
1356606 1356681 + 76 123440403 YEt036 - 10 Lys tRNA
1356689 1356852 + 164 123440403 YEs013 -
1356860 1357023 + 164 123440403 YEs014 -
1405212 1405286 - 75 123440403 YEt037 - 11 Arg tRNA
1482285 1482585 - 301 123440403 YEs015 -
1571499 1571589 - 91 123440403 YEs016 -
1571842 1573016 + 1175 123440403 YE1401 -
1573270 1573357 + 88 123440403 YEt038 - 08 Ser tRNA
1573364 1573439 + 76 123440403 YEt039 - 12 Thr tRNA
1591923 1591999 - 77 123440403 YEt040 - 03 Pro tRNA
1660972 1661052 - 81 123440403 YEs017 -
1757957 1759190 - 1234 123440403 YE1563 -
1796717 1796804 + 88 123440403 YEt041 - 08 Ser tRNA
1834478 1834817 - 340 123440403 YEs018 -
1966735 1966897 - 163 123440403 YEs019 -
1991547 1991664 - 118 123440403 YEs020 -
1991571 1991671 + 101 123440403 YEs021 -
2001664 2001781 + 118 123440403 YEs022 -
2002787 2002862 + 76 123440403 YEt042 - 12 Thr tRNA
2002864 2002938 + 75 123440403 YEt043 - 01 Gly tRNA
2013450 2013535 - 86 123440403 YEt044 - 15 Leu tRNA
2013546 2013619 - 74 123440403 YEt045 - 19 Cys tRNA
2013670 2013745 - 76 123440403 YEt046 - 01 Gly tRNA
2133260 2133335 + 76 123440403 YEt047 - 10 Lys tRNA
2325478 2325580 - 103 123440403 YEs023 -
2365851 2365927 + 77 123440403 YEt048 - 13 Val tRNA
2365976 2366052 + 77 123440403 YEt049 - 13 Val tRNA
2366095 2366171 + 77 123440403 YEt050 - 13 Val tRNA
2382205 2382313 + 109 123440403 YEs024 -
2460533 2460617 + 85 123440403 YEt051 - 18 Tyr tRNA
2460631 2460791 + 161 123440403 YEs025 -
2460805 2460965 + 161 123440403 YEs026 -
2460979 2461139 + 161 123440403 YEs027 -
2461153 2461313 + 161 123440403 YEs028 -
2613470 2613559 + 90 123440403 YEt052 - 08 Ser tRNA
2614794 2614883 + 90 123440403 YEt053 - 08 Ser tRNA
2810915 2810990 + 76 123440403 YEt054 - 07 Asn tRNA
2881784 2881859 + 76 123440403 YEt055 - 07 Asn tRNA
2893538 2893613 + 76 123440403 YEt056 - 07 Asn tRNA
3185286 3185361 - 76 123440403 YEt057 - 10 Lys tRNA
3185420 3185495 - 76 123440403 YEt058 - 10 Lys tRNA
3185592 3185662 - 71 123440403 YEt059 - Xaa tRNA
3185720 3185795 - 76 123440403 YEt060 - 10 Lys tRNA
3185886 3185958 - 73 123440403 YEt061 - 10 Lys tRNA
3252927 3253003 + 77 123440403 YEt062 - 16 Met tRNA
3253019 3253103 + 85 123440403 YEt063 - 15 Leu tRNA
3253127 3253201 + 75 123440403 YEt064 - 05 Gln tRNA
3253325 3253399 + 75 123440403 YEt065 - 05 Gln tRNA
3253431 3253507 + 77 123440403 YEt066 - 16 Met tRNA
3253513 3253587 + 75 123440403 YEt067 - 05 Gln tRNA
3311810 3311886 - 77 123440403 YEt068 - 11 Arg tRNA
3329500 3329583 - 84 123440403 YEs029 -
3388006 3388105 - 100 123440403 YEs030 -
3546822 3547063 - 242 123440403 YEr016 - 5S ribosomal RNA
3547063 3550056 - 2994 123440403 YEr017 - 23S ribosomal RNA
3550402 3550477 - 76 123440403 YEt069 - 02 Ala tRNA
3550552 3550628 - 77 123440403 YEt070 - 14 Ile tRNA
3550757 3552245 - 1489 123440403 YEr018 - 16S ribosomal RNA
3586741 3586915 - 175 123440403 YEs031 -
3595392 3595708 - 317 123440403 YEs032 -
3602754 3602859 + 106 123440403 YEs033 -
3607498 3607574 + 77 123440403 YEt071 - 16 Met tRNA
3607677 3607753 + 77 123440403 YEt072 - 16 Met tRNA
3607805 3607881 + 77 123440403 YEt073 - 16 Met tRNA
3638306 3638400 - 95 123440403 YEs034 -
3685747 3685820 - 74 123440403 YEt074 - 01 Gly tRNA
3711867 3712049 + 183 123440403 YEs035 -
3761922 3761997 + 76 123440403 YEt075 - 17 Phe tRNA
3828040 3828092 - 53 123440403 YEt076 - 17 Phe tRNA
4002700 4002884 - 185 123440403 YEs036 -
4021243 4021319 + 77 123440403 YEt077 - 16 Met tRNA
4045482 4045665 + 184 123440403 YEs037 -
4067369 4067671 - 303 123440403 YEs038 -
4239160 4239290 - 131 123440403 YEr019 - 5S ribosomal RNA
4239324 4239399 - 76 123440403 YEt078 - 12 Thr tRNA
4239407 4239648 - 242 123440403 YEr020 - 5S ribosomal RNA
4239648 4242641 - 2994 123440403 YEr021 - 23S ribosomal RNA
4242987 4243062 - 76 123440403 YEt079 - 02 Ala tRNA
4243137 4243213 - 77 123440403 YEt080 - 14 Ile tRNA
4243342 4244830 - 1489 123440403 YEr022 - 16S ribosomal RNA
4258864 4258975 - 112 123440403 YEs039 -
4382149 4382251 - 103 123440403 YEs040 -
4469630 4469706 - 77 123440403 YEt081 - 03 Pro tRNA
4504182 4504272 - 91 123440403 YEt082 - Sec tRNA