Геном прокариот/Материалы:NC 009142

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Эта статья — часть материалов: лаборатории Биоинформатика, исследовательского проекта «Геном прокариот»

   LOCUS       NC_009142            8212805 bp    DNA     circular BCT 09-AUG-2007
   DEFINITION  Saccharopolyspora erythraea NRRL 2338, complete genome.
   ACCESSION   NC_009142
   VERSION     NC_009142.1  GI:134096620
   KEYWORDS    complete genome.
   SOURCE      Saccharopolyspora erythraea NRRL 2338
     ORGANISM  Saccharopolyspora erythraea NRRL 2338
               Bacteria; Actinobacteria; Actinobacteridae; Actinomycetales;
               Pseudonocardineae; Pseudonocardiaceae; Saccharopolyspora.
   REFERENCE   1  (bases 1 to 8212805)
     AUTHORS   Oliynyk,M., Samborskyy,M., Lester,J.B., Mironenko,T., Scott,N.,
               Dickens,S., Haydock,S.F. and Leadlay,P.F.
     TITLE     Complete genome sequence of the erythromycin-producing bacterium
               Saccharopolyspora erythraea NRRL23338
     JOURNAL   Nat. Biotechnol. 25 (4), 447-453 (2007)
      PUBMED   17369815
   REFERENCE   2  (bases 1 to 8212805)
     CONSRTM   NCBI Genome Project
     TITLE     Direct Submission
     JOURNAL   Submitted (23-MAR-2007) National Center for Biotechnology
               Information, NIH, Bethesda, MD 20894, USA
   REFERENCE   3  (bases 1 to 8212805)
     AUTHORS   Oliynyk,M.
     TITLE     Direct Submission
     JOURNAL   Submitted (10-NOV-2006) Oliynyk M., Department of Biochemistry,
               University of Cambridge, 80 Tennis Court Road, Cambridge, CB21GA,
               UNITED KINGDOM
   COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
               NCBI review. The reference sequence was derived from AM420293.
               Project: 18489.
               COMPLETENESS: full length.

Расположение РНК[править]

Начало	Конец	Направление	Длина	PID	Ген	COG	Комментарий
14011	14087	+	77	134096620	SACE_8001	-	^{06 Asp tRNA}
14402	14474	+	73	134096620	SACE_8002	-	^{19 Cys tRNA}
69093	69175	+	83	134096620	SACE_8003	-	^{05 Gln tRNA}
139007	139079	-	73	134096620	SACE_8004	-	^{02 Ala tRNA}
245758	245845	+	88	134096620	SACE_8005	-	Xaa tRNA
257748	257837	+	90	134096620	SACE_8006	-	^{02 Ala tRNA}
257877	257949	+	73	134096620	SACE_8007	-	^{12 Thr tRNA}
269855	269943	+	89	134096620	SACE_8008	-	^{11 Arg tRNA}
273542	273627	+	86	134096620	SACE_8009	-	^{01 Gly tRNA}
347498	347574	-	77	134096620	SACE_8010	-	^{11 Arg tRNA}
425592	425665	+	74	134096620	SACE_8011	-	^{11 Arg tRNA}
519360	519435	+	76	134096620	SACE_8012	-	^{19 Cys tRNA}
842817	842892	-	76	134096620	SACE_8013	-	^{03 Pro tRNA}
868326	868398	+	73	134096620	SACE_8014	-	^{11 Arg tRNA}
915413	915486	-	74	134096620	SACE_8015	-	^{15 Leu tRNA}
958353	958426	+	74	134096620	SACE_8016	-	^{15 Leu tRNA}
1226388	1226464	+	77	134096620	SACE_8017	-	^{09 His tRNA}
1226781	1226854	+	74	134096620	SACE_8018	-	^{09 His tRNA}
1245915	1245990	+	76	134096620	SACE_8019	-	^{01 Gly tRNA}
1376200	1376276	-	77	134096620	SACE_8020	-	^{15 Leu tRNA}
1402739	1404280	+	1542	134096620	SACE_8101	-	16S ribosomal RNA
1404506	1407582	+	3077	134096620	SACE_8103	-	23S ribosomal RNA
1407707	1407827	+	121	134096620	SACE_8104	-	5S ribosomal RNA
1423961	1424033	-	73	134096620	SACE_8021	-	^{15 Leu tRNA}
1425561	1425636	-	76	134096620	SACE_8022	-	^{13 Val tRNA}
1456109	1456182	-	74	134096620	SACE_8023	-	^{08 Ser tRNA}
1504201	1504274	-	74	134096620	SACE_8024	-	^{08 Ser tRNA}
1504447	1504523	+	77	134096620	SACE_8025	-	^{20 Trp tRNA}
1657746	1657818	+	73	134096620	SACE_8026	-	^{13 Val tRNA}
1660112	1660189	-	78	134096620	SACE_8027	-	^{09 His tRNA}
1684451	1684525	+	75	134096620	SACE_8028	-	^{18 Tyr tRNA}
1777032	1778573	+	1542	134096620	SACE_8105	-	16S ribosomal RNA
1778799	1781875	+	3077	134096620	SACE_8107	-	23S ribosomal RNA
1782000	1782120	+	121	134096620	SACE_8108	-	5S ribosomal RNA
2140360	2140431	-	72	134096620	SACE_8029	-	^{09 His tRNA}
2142378	2142450	+	73	134096620	SACE_8030	-	^{02 Ala tRNA}
2142496	2142567	+	72	134096620	SACE_8031	-	^{02 Ala tRNA}
2142569	2142643	+	75	134096620	SACE_8032	-	^{06 Asp tRNA}
2486667	2486752	+	86	134096620	SACE_8033	-	^{04 Glu tRNA}
3920251	3920342	-	92	134096620	SACE_8034	-	^{08 Ser tRNA}
5740090	5740163	-	74	134096620	SACE_8035	-	^{01 Gly tRNA}
5876599	5876719	-	121	134096620	SACE_8109	-	5S ribosomal RNA
5876845	5879921	-	3077	134096620	SACE_8110	-	23S ribosomal RNA
5880147	5881689	-	1543	134096620	SACE_8112	-	16S ribosomal RNA
6084936	6085008	+	73	134096620	SACE_8036	-	^{05 Gln tRNA}
6891483	6891555	-	73	134096620	SACE_8037	-	^{15 Leu tRNA}
6892252	6892324	-	73	134096620	SACE_8038	-	^{15 Leu tRNA}
6892376	6892450	-	75	134096620	SACE_8039	-	^{15 Leu tRNA}
7057549	7057621	+	73	134096620	SACE_8040	-	^{03 Pro tRNA}
7214529	7214649	-	121	134096620	SACE_8113	-	5S ribosomal RNA
7214775	7217851	-	3077	134096620	SACE_8114	-	23S ribosomal RNA
7218077	7219618	-	1542	134096620	SACE_8116	-	16S ribosomal RNA
7429290	7429364	-	75	134096620	SACE_8041	-	^{06 Asp tRNA}
7687828	7687900	-	73	134096620	SACE_8042	-	^{03 Pro tRNA}
7691101	7691176	-	76	134096620	SACE_8043	-	^{09 His tRNA}
7691250	7691322	-	73	134096620	SACE_8044	-	^{01 Gly tRNA}
7696511	7696591	-	81	134096620	SACE_8045	-	^{13 Val tRNA}
7840504	7840580	-	77	134096620	SACE_8046	-	^{04 Glu tRNA}
7840611	7840687	-	77	134096620	SACE_8047	-	^{13 Val tRNA}
7840704	7840776	-	73	134096620	SACE_8048	-	^{17 Phe tRNA}
7890165	7890240	-	76	134096620	SACE_8049	-	^{17 Phe tRNA}
8031417	8031490	+	74	134096620	SACE_8050	-	^{03 Pro tRNA}