Геном прокариот/Материалы:NC 009328

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Эта статья — часть материалов: лаборатории Биоинформатика, исследовательского проекта «Геном прокариот»

   LOCUS       NC_009328            3550319 bp    DNA     circular BCT 06-APR-2007
   DEFINITION  Geobacillus thermodenitrificans NG80-2, complete genome.
   ACCESSION   NC_009328
   VERSION     NC_009328.1  GI:138893679
   KEYWORDS    .
   SOURCE      Geobacillus thermodenitrificans NG80-2
     ORGANISM  Geobacillus thermodenitrificans NG80-2
               Bacteria; Firmicutes; Bacillales; Bacillaceae; Geobacillus.
   REFERENCE   1  (bases 1 to 3550319)
     AUTHORS   Feng,L., Wang,W., Cheng,J., Ren,Y., Zhao,G., Gao,C., Tang,Y.,
               Liu,X., Han,W., Peng,X., Liu,R. and Wang,L.
     TITLE     Genome and proteome of long-chain alkane degrading Geobacillus
               thermodenitrificans NG80-2 isolated from a deep-subsurface oil
               reservoir
     JOURNAL   (er) Proc. Natl. Acad. Sci. U.S.A. (2007) In press
      PUBMED   17372208
   REFERENCE   2  (bases 1 to 3550319)
     CONSRTM   NCBI Genome Project
     TITLE     Direct Submission
     JOURNAL   Submitted (03-APR-2007) National Center for Biotechnology
               Information, NIH, Bethesda, MD 20894, USA
   REFERENCE   3  (bases 1 to 3550319)
     AUTHORS   Wang,L., Feng,L., Wang,W., Cheng,J., Ren,Y., Zhao,G. and Gao,C.
     TITLE     Direct Submission
     JOURNAL   Submitted (22-JAN-2007) TEDA School of Biological Sciences and
               Biotechnology, Nankai University, Hongda Street, TEDA, Tianjin
               300457, The People's Republic of China
   COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
               NCBI review. The reference sequence was derived from CP000557.
               COMPLETENESS: full length.

Расположение РНК[править]

Начало	Конец	Направление	Длина	PID	Ген	COG	Комментарий
10618	12168	+	1551	138893679	GTNG_16s001	-	16S ribosomal RNA
12396	12469	+	74	138893679	GTNG_t001	-	^{14 Ile tRNA}
12481	12556	+	76	138893679	GTNG_t002	-	^{02 Ala tRNA}
12744	15672	+	2929	138893679	GTNG_23s001	-	23S ribosomal RNA
15771	15887	+	117	138893679	GTNG_5s001	-	5S ribosomal RNA
29329	30879	+	1551	138893679	GTNG_16s002	-	16S ribosomal RNA
31105	31178	+	74	138893679	GTNG_t003	-	^{14 Ile tRNA}
31190	31265	+	76	138893679	GTNG_t004	-	^{02 Ala tRNA}
31453	34381	+	2929	138893679	GTNG_23s002	-	23S ribosomal RNA
34570	34686	+	117	138893679	GTNG_5s002	-	5S ribosomal RNA
67084	67160	+	77	138893679	GTNG_t005	-	^{16 Met tRNA}
67172	67243	+	72	138893679	GTNG_t006	-	^{04 Glu tRNA}
86332	86448	+	117	138893679	GTNG_5s003	-	5S ribosomal RNA
86454	86529	+	76	138893679	GTNG_t007	-	^{13 Val tRNA}
86671	86746	+	76	138893679	GTNG_t008	-	^{10 Lys tRNA}
86757	86841	+	85	138893679	GTNG_t009	-	^{15 Leu tRNA}
86853	86927	+	75	138893679	GTNG_t010	-	^{01 Gly tRNA}
86943	87028	+	86	138893679	GTNG_t011	-	^{15 Leu tRNA}
87032	87105	+	74	138893679	GTNG_t012	-	^{11 Arg tRNA}
87110	87183	+	74	138893679	GTNG_t013	-	^{03 Pro tRNA}
87196	87268	+	73	138893679	GTNG_t014	-	^{02 Ala tRNA}
87327	88874	+	1548	138893679	GTNG_16s003	-	16S ribosomal RNA
89262	92191	+	2930	138893679	GTNG_23s003	-	23S ribosomal RNA
92384	92500	+	117	138893679	GTNG_5s004	-	5S ribosomal RNA
150331	151880	+	1550	138893679	GTNG_16s004	-	16S ribosomal RNA
152129	155057	+	2929	138893679	GTNG_23s004	-	23S ribosomal RNA
155207	155323	+	117	138893679	GTNG_5s005	-	5S ribosomal RNA
155333	155407	+	75	138893679	GTNG_t015	-	^{07 Asn tRNA}
155415	155490	+	76	138893679	GTNG_t016	-	^{12 Thr tRNA}
155501	155572	+	72	138893679	GTNG_t017	-	^{04 Glu tRNA}
155676	155750	+	75	138893679	GTNG_t018	-	^{05 Gln tRNA}
155882	155957	+	76	138893679	GTNG_t019	-	^{10 Lys tRNA}
155962	156033	+	72	138893679	GTNG_t020	-	^{01 Gly tRNA}
156040	156115	+	76	138893679	GTNG_t021	-	^{02 Ala tRNA}
224699	224773	+	75	138893679	GTNG_t022	-	^{07 Asn tRNA}
224780	224872	+	93	138893679	GTNG_t023	-	^{08 Ser tRNA}
224889	224960	+	72	138893679	GTNG_t024	-	^{04 Glu tRNA}
224991	225066	+	76	138893679	GTNG_t025	-	^{06 Asp tRNA}
225080	225154	+	75	138893679	GTNG_t026	-	^{05 Gln tRNA}
225317	225392	+	76	138893679	GTNG_t027	-	^{10 Lys tRNA}
225398	225479	+	82	138893679	GTNG_t028	-	^{15 Leu tRNA}
225491	225573	+	83	138893679	GTNG_t029	-	^{15 Leu tRNA}
225647	225723	+	77	138893679	GTNG_t030	-	^{11 Arg tRNA}
225728	225801	+	74	138893679	GTNG_t031	-	^{03 Pro tRNA}
225817	225890	+	74	138893679	GTNG_t032	-	^{01 Gly tRNA}
225975	227522	+	1548	138893679	GTNG_16s005	-	16S ribosomal RNA
227912	230841	+	2930	138893679	GTNG_23s005	-	23S ribosomal RNA
231093	231209	+	117	138893679	GTNG_5s006	-	5S ribosomal RNA
258793	260345	+	1553	138893679	GTNG_16s006	-	16S ribosomal RNA
260732	263661	+	2930	138893679	GTNG_23s006	-	23S ribosomal RNA
263954	264070	+	117	138893679	GTNG_5s007	-	5S ribosomal RNA
547532	549082	+	1551	138893679	GTNG_16s007	-	16S ribosomal RNA
549474	552403	+	2930	138893679	GTNG_23s007	-	23S ribosomal RNA
552631	552747	+	117	138893679	GTNG_5s008	-	5S ribosomal RNA
552753	552828	+	76	138893679	GTNG_t033	-	^{13 Val tRNA}
552840	552916	+	77	138893679	GTNG_t034	-	^{16 Met tRNA}
552921	552996	+	76	138893679	GTNG_t035	-	^{06 Asp tRNA}
553174	553249	+	76	138893679	GTNG_t036	-	^{17 Phe tRNA}
553263	553335	+	73	138893679	GTNG_t037	-	^{12 Thr tRNA}
553346	553421	+	76	138893679	GTNG_t038	-	^{10 Lys tRNA}
553426	553500	+	75	138893679	GTNG_t039	-	^{01 Gly tRNA}
553508	553593	+	86	138893679	GTNG_t040	-	^{15 Leu tRNA}
553597	553670	+	74	138893679	GTNG_t041	-	^{11 Arg tRNA}
553675	553748	+	74	138893679	GTNG_t042	-	^{03 Pro tRNA}
553758	553833	+	76	138893679	GTNG_t043	-	^{02 Ala tRNA}
553851	553924	+	74	138893679	GTNG_t044	-	^{16 Met tRNA}
553933	554009	+	77	138893679	GTNG_t045	-	^{16 Met tRNA}
554027	554117	+	91	138893679	GTNG_t046	-	^{08 Ser tRNA}
554148	554223	+	76	138893679	GTNG_t047	-	^{12 Thr tRNA}
554232	554304	+	73	138893679	GTNG_t048	-	^{09 His tRNA}
554335	554405	+	71	138893679	GTNG_t049	-	^{01 Gly tRNA}
554411	554487	+	77	138893679	GTNG_t050	-	^{14 Ile tRNA}
554730	554804	+	75	138893679	GTNG_t051	-	^{07 Asn tRNA}
554809	554901	+	93	138893679	GTNG_t052	-	^{08 Ser tRNA}
554907	554978	+	72	138893679	GTNG_t053	-	^{04 Glu tRNA}
819739	819811	+	73	138893679	GTNG_t054	-	^{13 Val tRNA}
1308191	1308266	+	76	138893679	GTNG_t055	-	^{11 Arg tRNA}
1312223	1313773	+	1551	138893679	GTNG_16s008	-	16S ribosomal RNA
1313909	1316838	+	2930	138893679	GTNG_23s008	-	23S ribosomal RNA
1317032	1317148	+	117	138893679	GTNG_5s009	-	5S ribosomal RNA
1581848	1581924	+	77	138893679	GTNG_t056	-	^{03 Pro tRNA}
1581933	1582005	+	73	138893679	GTNG_t057	-	^{02 Ala tRNA}
1744115	1744188	-	74	138893679	GTNG_t058	-	^{14 Ile tRNA}
1744207	1744288	-	82	138893679	GTNG_t059	-	^{18 Tyr tRNA}
1744300	1744372	-	73	138893679	GTNG_t060	-	^{12 Thr tRNA}
1744410	1744502	-	93	138893679	GTNG_t061	-	^{08 Ser tRNA}
1744520	1744603	-	84	138893679	GTNG_t062	-	^{15 Leu tRNA}
1744612	1744683	-	72	138893679	GTNG_t063	-	^{02 Ala tRNA}
1744688	1744762	-	75	138893679	GTNG_t064	-	^{13 Val tRNA}
1744776	1744892	-	117	138893679	GTNG_5s010	-	5S ribosomal RNA
1790006	1790077	-	72	138893679	GTNG_t065	-	^{05 Gln tRNA}
2144557	2144630	+	74	138893679	GTNG_t066	-	^{03 Pro tRNA}
2168836	2168912	-	77	138893679	GTNG_t067	-	^{11 Arg tRNA}
2168935	2169005	-	71	138893679	GTNG_t068	-	^{01 Gly tRNA}
2169109	2169182	-	74	138893679	GTNG_t069	-	^{11 Arg tRNA}
2169192	2169263	-	72	138893679	GTNG_t070	-	^{01 Gly tRNA}
2169329	2172258	-	2930	138893679	GTNG_23s009	-	23S ribosomal RNA
2213651	2215202	-	1552	138893679	GTNG_16s009	-	16S ribosomal RNA
2966220	2966304	-	85	138893679	GTNG_t071	-	^{15 Leu tRNA}
2966362	2966435	-	74	138893679	GTNG_t072	-	^{19 Cys tRNA}
2966445	2966516	-	72	138893679	GTNG_t073	-	^{01 Gly tRNA}
2966522	2966596	-	75	138893679	GTNG_t074	-	^{05 Gln tRNA}
2966613	2966685	-	73	138893679	GTNG_t075	-	^{09 His tRNA}
2966703	2966776	-	74	138893679	GTNG_t076	-	^{20 Trp tRNA}
2966783	2966867	-	85	138893679	GTNG_t077	-	^{18 Tyr tRNA}
2966874	2966949	-	76	138893679	GTNG_t078	-	^{12 Thr tRNA}
2966987	2967062	-	76	138893679	GTNG_t079	-	^{17 Phe tRNA}
2967098	2967173	-	76	138893679	GTNG_t080	-	^{06 Asp tRNA}
2967178	2967254	-	77	138893679	GTNG_t081	-	^{16 Met tRNA}
2967266	2967341	-	76	138893679	GTNG_t082	-	^{13 Val tRNA}
2967351	2967422	-	72	138893679	GTNG_t083	-	^{04 Glu tRNA}
2967436	2967526	-	91	138893679	GTNG_t084	-	^{08 Ser tRNA}
2967531	2967605	-	75	138893679	GTNG_t085	-	^{07 Asn tRNA}
2967909	2970838	-	2930	138893679	GTNG_23s010	-	23S ribosomal RNA
2971225	2972779	-	1555	138893679	GTNG_16s010	-	16S ribosomal RNA
2975951	2976023	+	73	138893679	GTNG_t086	-	^{02 Ala tRNA}
3108965	3109036	-	72	138893679	GTNG_t087	-	^{11 Arg tRNA}