Материалы:NC 009434

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Эта статья — часть материалов: лаборатории Биоинформатика, исследовательского проекта «Геном прокариот»

   LOCUS       NC_009434            4567418 bp    DNA     circular BCT 03-JUL-2007
   DEFINITION  Pseudomonas stutzeri A1501, complete genome.
   ACCESSION   NC_009434
   VERSION     NC_009434.1  GI:146280397
   KEYWORDS    .
   SOURCE      Pseudomonas stutzeri A1501
     ORGANISM  Pseudomonas stutzeri A1501
               Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales;
               Pseudomonadaceae; Pseudomonas.
   REFERENCE   1  (bases 1 to 4567418)
     AUTHORS   Yan,Y., Yang,J., Dou,Y., Ping,S., Chen,M., Yao,Z., Li,H., Lu,W.,
               Zhang,W., Peng,J., Liu,W., He,S., Geng,L., Zhang,X., Yang,F.,
               Li,D., Lin,Z., Wang,Y., Elmerich,C., Lin,M. and Jin,Q.
     TITLE     Complete genome sequence of the metabolically versatile and
               root-associated nitrogen-fixing bacterium Pseudomonas stutzeri
               A1501
     JOURNAL   Unpublished
   REFERENCE   2  (bases 1 to 4567418)
     CONSRTM   NCBI Genome Project
     TITLE     Direct Submission
     JOURNAL   Submitted (08-MAY-2007) National Center for Biotechnology
               Information, NIH, Bethesda, MD 20894, USA
   REFERENCE   3  (bases 1 to 4567418)
     AUTHORS   Yan,Y., Jin,Q., Yang,T., Wang,Y. and Lin,M.
     TITLE     Direct Submission
     JOURNAL   Submitted (03-APR-2006) The Biotechnology Research Institute, The
               Chinese Academy of Agricultural Sciences, 12 Zhongguancun South
               Street, HaiDian, Beijing, Beijing 100081, P. R. China
   COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
               NCBI review. The reference sequence was derived from CP000304.
               Bacteria available from Prof. Lin Min: linmin57@vip.163.com.
               COMPLETENESS: full length.

Расположение РНК[править]

Начало	Конец	Направление	Длина	PID	Ген	COG	Комментарий
111101	111177	-	77	146280397	PST_0094	-	^{11 Arg tRNA}
297607	297682	-	76	146280397	PST_0260	-	^{12 Thr tRNA}
813658	813734	-	77	146280397	PST_0711	-	^{16 Met tRNA}
866708	868256	+	1549	146280397	PST_0759	-	16S ribosomal RNA
868336	868412	+	77	146280397	PST_0760	-	^{14 Ile tRNA}
868419	868494	+	76	146280397	PST_0761	-	^{02 Ala tRNA}
868749	871649	+	2901	146280397	PST_0762	-	23S ribosomal RNA
871772	871891	+	120	146280397	PST_0762a	-	5S ribosomal RNA
874530	874614	+	85	146280397	PST_0766	-	^{18 Tyr tRNA}
874640	874713	+	74	146280397	PST_0767	-	^{01 Gly tRNA}
874740	874815	+	76	146280397	PST_0768	-	^{12 Thr tRNA}
876145	876220	+	76	146280397	PST_0770	-	^{20 Trp tRNA}
1370963	1371036	-	74	146280397	PST_1260	-	^{01 Gly tRNA}
1471710	1471800	+	91	146280397	PST_1372	-	^{08 Ser tRNA}
1471911	1471987	+	77	146280397	PST_1373	-	^{11 Arg tRNA}
1472057	1472133	+	77	146280397	PST_1374	-	^{11 Arg tRNA}
1479180	1479256	+	77	146280397	PST_1381	-	^{11 Arg tRNA}
1569599	1569674	+	76	146280397	PST_1463	-	^{12 Thr tRNA}
1599509	1599578	+	70	146280397	PST_1490	-	^{08 Ser tRNA}
1766060	1766149	-	90	146280397	PST_1646	-	^{08 Ser tRNA}
1797078	1798626	+	1549	146280397	PST_1677	-	16S ribosomal RNA
1798706	1798782	+	77	146280397	PST_1678	-	^{14 Ile tRNA}
1798789	1798864	+	76	146280397	PST_1679	-	^{02 Ala tRNA}
1799119	1802019	+	2901	146280397	PST_1680	-	23S ribosomal RNA
1802142	1802261	+	120	146280397	PST_1680a	-	5S ribosomal RNA
1904615	1904691	-	77	146280397	PST_1764	-	^{16 Met tRNA}
1904851	1904927	-	77	146280397	PST_1765	-	^{16 Met tRNA}
1928959	1929034	+	76	146280397	PST_1788	-	^{13 Val tRNA}
1929072	1929148	+	77	146280397	PST_1789	-	^{06 Asp tRNA}
2160517	2160606	+	90	146280397	PST_1989	-	^{08 Ser tRNA}
2233520	2233596	+	77	146280397	PST_2055	-	^{11 Arg tRNA}
2233630	2233705	+	76	146280397	PST_2056	-	^{09 His tRNA}
2233757	2233841	+	85	146280397	PST_2057	-	^{15 Leu tRNA}
2269935	2270010	+	76	146280397	PST_2088	-	^{01 Gly tRNA}
2270057	2270130	+	74	146280397	PST_2090	-	^{19 Cys tRNA}
2282310	2282396	-	87	146280397	PST_2106	-	^{15 Leu tRNA}
2530610	2530729	-	120	146280397	PST_2317a	-	5S ribosomal RNA
2530852	2533752	-	2901	146280397	PST_2318	-	23S ribosomal RNA
2534007	2534082	-	76	146280397	PST_2319	-	^{02 Ala tRNA}
2534089	2534165	-	77	146280397	PST_2320	-	^{14 Ile tRNA}
2534256	2535793	-	1538	146280397	PST_2321	-	16S ribosomal RNA
2584180	2584256	-	77	146280397	PST_2361	-	^{03 Pro tRNA}
2591931	2592007	-	77	146280397	PST_2370	-	^{13 Val tRNA}
2597656	2597732	+	77	146280397	PST_2378	-	^{03 Pro tRNA}
2760167	2760242	-	76	146280397	PST_2530	-	^{01 Gly tRNA}
2760260	2760335	-	76	146280397	PST_2532	-	^{04 Glu tRNA}
2996044	2996120	-	77	146280397	PST_2771	-	^{06 Asp tRNA}
2996134	2996209	-	76	146280397	PST_2772	-	^{13 Val tRNA}
3014370	3014459	-	90	146280397	PST_2787	-	^{08 Ser tRNA}
3024834	3024909	-	76	146280397	PST_2798	-	^{10 Lys tRNA}
3223943	3224018	-	76	146280397	PST_2992	-	^{04 Glu tRNA}
3224061	3224136	-	76	146280397	PST_2993	-	^{02 Ala tRNA}
3224180	3224255	-	76	146280397	PST_2994	-	^{04 Glu tRNA}
3224321	3224396	-	76	146280397	PST_2995	-	^{02 Ala tRNA}
3229814	3229889	+	76	146280397	PST_2999	-	^{07 Asn tRNA}
3282976	3283062	+	87	146280397	PST_3053	-	^{15 Leu tRNA}
3434083	3434157	+	75	146280397	PST_3187	-	^{05 Gln tRNA}
3434216	3434290	+	75	146280397	PST_3188	-	^{05 Gln tRNA}
3493808	3493884	-	77	146280397	PST_3232	-	^{16 Met tRNA}
3513772	3513891	-	120	146280397	PST_3248a	-	5S ribosomal RNA
3514035	3516937	-	2903	146280397	PST_3249	-	23S ribosomal RNA
3517190	3517265	-	76	146280397	PST_3250	-	^{02 Ala tRNA}
3517296	3517372	-	77	146280397	PST_3251	-	^{14 Ile tRNA}
3517463	3519000	-	1538	146280397	PST_3252	-	16S ribosomal RNA
3587315	3587391	-	77	146280397	PST_3313	-	^{16 Met tRNA}
3587486	3587571	-	86	146280397	PST_3314	-	^{15 Leu tRNA}
3618456	3618530	+	75	146280397	PST_3342	-	^{15 Leu tRNA}
3927351	3927426	-	76	146280397	PST_3637	-	^{10 Lys tRNA}
3927432	3927508	-	77	146280397	PST_3638	-	^{03 Pro tRNA}
3927518	3927593	-	76	146280397	PST_3639	-	^{07 Asn tRNA}
3956892	3956978	+	87	146280397	PST_3660	-	^{15 Leu tRNA}
3957093	3957179	+	87	146280397	PST_3662	-	^{15 Leu tRNA}
4453509	4453584	+	76	146280397	PST_4099	-	^{17 Phe tRNA}