Геном прокариот/Материалы:NC 009454

Материал из Викиверситета
(перенаправлено с «Материалы:NC 009454»)
Базовый уровень статей

Выделить только проверенную информацию

Создать черновик

   LOCUS       NC_009454            3025375 bp    DNA     circular BCT 08-AUG-2007
   DEFINITION  Pelotomaculum thermopropionicum SI, complete genome.
   ACCESSION   NC_009454
   VERSION     NC_009454.1  GI:147676335
   KEYWORDS    .
   SOURCE      Pelotomaculum thermopropionicum SI
     ORGANISM  Pelotomaculum thermopropionicum SI
               Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae;
               Pelotomaculum.
   REFERENCE   1
     AUTHORS   Kosaka,T., Uchiyama,T., Ishii,S., Enoki,M., Imachi,H., Kamagata,Y.,
               Ohashi,A., Harada,H., Ikenaga,H. and Watanabe,K.
     TITLE     Reconstruction and regulation of the central catabolic pathway in
               the thermophilic propionate-oxidizing syntroph Pelotomaculum
               thermopropionicum
     JOURNAL   J. Bacteriol. 188 (1), 202-210 (2006)
      PUBMED   16352836
   REFERENCE   2
     AUTHORS   Kosaka,T., Kato,S., Shimoyama,T., Ishii,S., Asami,H. and
               Watanabe,K.
     TITLE     The complete genome sequence of Pelotomaculum thermopropionicum
     JOURNAL   Unpublished
   REFERENCE   3  (bases 1 to 3025375)
     CONSRTM   NCBI Genome Project
     TITLE     Direct Submission
     JOURNAL   Submitted (15-MAY-2007) National Center for Biotechnology
               Information, NIH, Bethesda, MD 20894, USA
   REFERENCE   4  (bases 1 to 3025375)
     AUTHORS   Watanabe,K. and Kosaka,T.
     TITLE     Direct Submission
     JOURNAL   Submitted (07-MAY-2007) Kazuya Watanabe, Marine Biotechnology
               Institute Co., Ltd.; 3-75-1 Heita, Kamaishi, Iwate 026-0001, Japan
               (E-mail:kazuya.watanabe@mbio.jp, Tel:81-193-26-6581,
               Fax:81-193-26-6592)
   COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
               NCBI review. The reference sequence was derived from AP009389.
               COMPLETENESS: full length.


Расположение РНК[править]

Начало Конец Направление Длина PID Ген COG Комментарий
18890 18979 + 90 147676335 PTH_t001 - Anticodon: TGA
19006 19100 + 95 147676335 PTH_t002 - Anticodon: GCT
26218 26294 + 77 147676335 PTH_t003 - Anticodon: ACG
26309 26385 + 77 147676335 PTH_t004 - Anticodon: CCT
27909 28002 + 94 147676335 PTH_t005 - Anticodon: CGA
53250 53339 + 90 147676335 PTH_t006 - Anticodon: GGA
265400 266925 + 1526 147676335 PTH_r001 - 16S ribosomal RNA
267134 267210 + 77 147676335 PTH_t007 - Anticodon: GAT
267320 267394 + 75 147676335 PTH_t008 - Anticodon: TGC
267447 268042 + 596 147676335 PTH_r002 - 23S ribosomal RNA
268148 268774 + 627 147676335 PTH_r002 - 23S ribosomal RNA
269201 270929 + 1729 147676335 PTH_r002 - 23S ribosomal RNA
271060 271179 + 120 147676335 PTH_r003 - 5S ribosomal RNA
288112 288186 + 75 147676335 PTH_t009 - Anticodon: GTT
307354 307429 + 76 147676335 PTH_t010 - Anticodon: TGT
307540 307624 + 85 147676335 PTH_t011 - Anticodon: GTA
307649 307724 + 76 147676335 PTH_t012 - Anticodon: CAT
307729 307804 + 76 147676335 PTH_t013 - Anticodon: GGT
307823 307899 + 77 147676335 PTH_t014 - Anticodon: CAT
758580 758654 + 75 147676335 PTH_t015 - Anticodon: CCG
799597 799673 + 77 147676335 PTH_t016 - Anticodon: GTG
799681 799756 + 76 147676335 PTH_t017 - Anticodon: TTG
799786 799861 + 76 147676335 PTH_t018 - Anticodon: TTT
800040 800124 + 85 147676335 PTH_t019 - Anticodon: TAG
807311 807387 - 77 147676335 PTH_t020 - Anticodon: TCT
807395 807468 - 74 147676335 PTH_t021 - Anticodon: TCC
844002 844076 + 75 147676335 PTH_t022 - Anticodon: GGC
927558 927632 + 75 147676335 PTH_t023 - Anticodon: GTT
927639 927713 + 75 147676335 PTH_t024 - Anticodon: CAT
927794 927869 + 76 147676335 PTH_t025 - Anticodon: TTC
927874 927949 + 76 147676335 PTH_t026 - Anticodon: TAC
958044 958119 - 76 147676335 PTH_t027 - Anticodon: CGC
969369 969445 + 77 147676335 PTH_t028 - Anticodon: GTC
969453 969528 + 76 147676335 PTH_t029 - Anticodon: GAA
969584 969658 + 75 147676335 PTH_t030 - Anticodon: GCC
969667 969741 + 75 147676335 PTH_t031 - Anticodon: GCA
993839 993932 - 94 147676335 PTH_t032 - Anticodon: TCA
1016024 1016111 - 88 147676335 PTH_t033 - Anticodon: CAG
1017272 1017347 - 76 147676335 PTH_t034 - Anticodon: CTT
1017378 1017452 - 75 147676335 PTH_t035 - Anticodon: TTG
1017467 1017544 - 78 147676335 PTH_t036 - Anticodon: TGG
1049070 1050595 + 1526 147676335 PTH_r004 - 16S ribosomal RNA
1050854 1051450 + 597 147676335 PTH_r005 - 23S ribosomal RNA
1051555 1052180 + 626 147676335 PTH_r005 - 23S ribosomal RNA
1052608 1054336 + 1729 147676335 PTH_r005 - 23S ribosomal RNA
1054467 1054587 + 121 147676335 PTH_r006 - 5S ribosomal RNA
1443171 1443246 + 76 147676335 PTH_t037 - Anticodon: CCA
1450227 1450303 + 77 147676335 PTH_t038 - Anticodon: CCA
1475245 1475322 - 78 147676335 PTH_t039 - Anticodon: CGG
1525667 1525744 - 78 147676335 PTH_t040 - Anticodon: GGG
1525786 1525861 - 76 147676335 PTH_t041 - Anticodon: GGC
1525874 1525948 - 75 147676335 PTH_t042 - Anticodon: GCC
1975289 1975377 + 89 147676335 PTH_t043 - Anticodon: TAA
2082473 2082547 - 75 147676335 PTH_t044 - Anticodon: GAC
2100667 2100749 + 83 147676335 PTH_t045 - Anticodon: GAG
2244231 2244319 + 89 147676335 PTH_t046 - Anticodon: CAA
2692921 2692995 + 75 147676335 PTH_t047 - Anticodon: CAC
2708988 2709062 - 75 147676335 PTH_t048 - Anticodon: CGT
2985439 2985513 - 75 147676335 PTH_t049 - Anticodon: CCC
2985709 2985784 - 76 147676335 PTH_t050 - Anticodon: TTC
2985828 2985903 - 76 147676335 PTH_t051 - Anticodon: TTT