Геном прокариот/Материалы:NC 009614

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Эта статья — часть материалов: лаборатории Биоинформатика, исследовательского проекта «Геном прокариот»

   LOCUS       NC_009614            5163189 bp    DNA     circular BCT 29-JUN-2007
   DEFINITION  Bacteroides vulgatus ATCC 8482, complete genome.
   ACCESSION   NC_009614
   VERSION     NC_009614.1  GI:150002608
   KEYWORDS    .
   SOURCE      Bacteroides vulgatus ATCC 8482
     ORGANISM  Bacteroides vulgatus ATCC 8482
               Bacteria; Bacteroidetes; Bacteroidetes (class); Bacteroidales;
               Bacteroidaceae; Bacteroides.
   REFERENCE   1  (bases 1 to 5163189)
     AUTHORS   Xu,J., Mahowald,M.A., Ley,R.E., Lozupone,C.A., Hamady,M.,
               Martens,E.C., Henrissat,B., Coutinho,P.M., Minx,P., Latreille,P.,
               Cordum,H., Van Brunt,A., Kim,K., Fulton,R.S., Fulton,L.A.,
               Clifton,S.W., Wilson,R.K., Knight,R.D. and Gordon,J.I.
     TITLE     Evolution of Symbiotic Bacteria in the Distal Human Intestine
     JOURNAL   (er) PLoS Biol. 5 (7), E156 (2007) In press
      PUBMED   17579514
   REFERENCE   2  (bases 1 to 5163189)
     AUTHORS   Xu,J., Minx,P., Latreille,P., Cordum,H., Van Brunt,A., Kim,K.,
               Fulton,R., Fulton,L., Chinwalla,A., Clifton,S., Wilson,R.,
               Mahowald,M., Henrissat,B., Martens,E., Ley,R. and Gordon,J.
     TITLE     Direct Submission
     JOURNAL   Submitted (21-SEP-2005) Genome Sequencing Center and Center for
               Genome Science, Washington University in St. Louis, 4444 Forest
               Park Boulevard, St. Louis, MO 63108, USA
   REFERENCE   3  (bases 1 to 5163189)
     CONSRTM   NCBI Genome Project
     TITLE     Direct Submission
     JOURNAL   Submitted (14-SEP-2002) National Center for Biotechnology
               Information, NIH, Bethesda, MD 20894, USA
   COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
               NCBI review. The reference sequence was derived from CP000139.
               COMPLETENESS: full length.

Расположение РНК[править]

Начало	Конец	Направление	Длина	PID	Ген	COG	Комментарий
212263	212336	-	74	150002608	BVU_0139	-	^{16 Met tRNA}
212396	212472	-	77	150002608	BVU_0140	-	^{16 Met tRNA}
325238	325322	+	85	150002608	BVU_0211	-	^{15 Leu tRNA}
343154	343304	-	151	150002608	BVU_0224	-	5S ribosomal RNA
343479	346279	-	2801	150002608	BVU_0225	-	23S ribosomal RNA
346422	346495	-	74	150002608	BVU_0226	-	^{02 Ala tRNA}
346510	346586	-	77	150002608	BVU_0227	-	^{14 Ile tRNA}
346743	348252	-	1510	150002608	BVU_0228	-	16S ribosomal RNA
501218	501291	+	74	150002608	BVU_0344	-	^{12 Thr tRNA}
559150	559225	+	76	150002608	BVU_0386	-	^{16 Met tRNA}
586711	586788	-	78	150002608	BVU_0405	-	^{13 Val tRNA}
586826	586903	-	78	150002608	BVU_0406	-	^{13 Val tRNA}
586942	587016	-	75	150002608	BVU_0407	-	^{13 Val tRNA}
644263	644416	-	154	150002608	BVU_0454	-	5S ribosomal RNA
644595	647392	-	2798	150002608	BVU_0455	-	23S ribosomal RNA
647521	647594	-	74	150002608	BVU_0456	-	^{02 Ala tRNA}
647609	647685	-	77	150002608	BVU_0457	-	^{14 Ile tRNA}
647842	649351	-	1510	150002608	BVU_0458	-	16S ribosomal RNA
920325	920397	-	73	150002608	BVU_0641	-	^{03 Pro tRNA}
920578	920653	+	76	150002608	BVU_0642	-	^{17 Phe tRNA}
1118688	1118763	-	76	150002608	BVU_0819	-	^{20 Trp tRNA}
1120057	1120128	-	72	150002608	BVU_0821	-	^{12 Thr tRNA}
1120141	1120213	-	73	150002608	BVU_0822	-	^{01 Gly tRNA}
1120247	1120329	-	83	150002608	BVU_0823	-	^{18 Tyr tRNA}
1120370	1120446	-	77	150002608	BVU_0824	-	^{12 Thr tRNA}
1133552	1133625	+	74	150002608	BVU_0837	-	^{07 Asn tRNA}
1133651	1133724	+	74	150002608	BVU_0838	-	^{07 Asn tRNA}
1160440	1160527	-	88	150002608	BVU_0855	-	^{15 Leu tRNA}
1160544	1160616	-	73	150002608	BVU_0856	-	^{01 Gly tRNA}
1295598	1295672	+	75	150002608	BVU_0980	-	^{11 Arg tRNA}
1304273	1304347	+	75	150002608	BVU_0987	-	^{11 Arg tRNA}
1609248	1609318	+	71	150002608	BVU_1193	-	^{05 Gln tRNA}
1753704	1753780	+	77	150002608	BVU_1303	-	^{16 Met tRNA}
1862642	1862716	-	75	150002608	BVU_1390	-	^{04 Glu tRNA}
1916377	1916463	+	87	150002608	BVU_1436	-	^{15 Leu tRNA}
2084769	2084844	-	76	150002608	BVU_1600	-	^{17 Phe tRNA}
2095441	2096950	+	1510	150002608	BVU_1609	-	16S ribosomal RNA
2097107	2097183	+	77	150002608	BVU_1610	-	^{14 Ile tRNA}
2097198	2097271	+	74	150002608	BVU_1611	-	^{02 Ala tRNA}
2097403	2100203	+	2801	150002608	BVU_1612	-	23S ribosomal RNA
2100376	2100526	+	151	150002608	BVU_1613	-	5S ribosomal RNA
2183533	2185042	+	1510	150002608	BVU_1695	-	16S ribosomal RNA
2185199	2185275	+	77	150002608	BVU_1696	-	^{14 Ile tRNA}
2185290	2185363	+	74	150002608	BVU_1697	-	^{02 Ala tRNA}
2185488	2188316	+	2829	150002608	BVU_1698	-	23S ribosomal RNA
2188468	2188621	+	154	150002608	BVU_1699	-	5S ribosomal RNA
2380095	2380170	-	76	150002608	BVU_1834	-	^{10 Lys tRNA}
2471158	2471235	-	78	150002608	BVU_1898	-	^{03 Pro tRNA}
2499345	2499415	+	71	150002608	BVU_1922	-	^{05 Gln tRNA}
2522607	2522694	+	88	150002608	BVU_1941	-	^{08 Ser tRNA}
2587720	2589229	+	1510	150002608	BVU_1999	-	16S ribosomal RNA
2589387	2589463	+	77	150002608	BVU_2000	-	^{14 Ile tRNA}
2589478	2589551	+	74	150002608	BVU_2001	-	^{02 Ala tRNA}
2589683	2592483	+	2801	150002608	BVU_2002	-	23S ribosomal RNA
2592656	2592806	+	151	150002608	BVU_2003	-	5S ribosomal RNA
2696565	2696640	-	76	150002608	BVU_2084	-	^{20 Trp tRNA}
2710261	2710348	+	88	150002608	BVU_2094	-	^{08 Ser tRNA}
2864348	2864424	+	77	150002608	BVU_2217	-	^{09 His tRNA}
2907991	2908081	+	91	150002608	BVU_2248	-	^{08 Ser tRNA}
3129407	3129481	-	75	150002608	BVU_2434	-	^{04 Glu tRNA}
3152477	3152564	+	88	150002608	BVU_2451	-	^{08 Ser tRNA}
3328901	3328976	-	76	150002608	BVU_2616	-	^{01 Gly tRNA}
3328983	3329068	-	86	150002608	BVU_2617	-	^{18 Tyr tRNA}
3345414	3345487	+	74	150002608	BVU_2637	-	^{12 Thr tRNA}
3442271	3442343	+	73	150002608	BVU_2700	-	^{10 Lys tRNA}
3460103	3460176	+	74	150002608	BVU_2716	-	^{11 Arg tRNA}
3633137	3633243	-	107	150002608	BVU_2862	-	^{03 Pro tRNA}
3633700	3633774	-	75	150002608	BVU_2863	-	^{01 Gly tRNA}
3633851	3633924	-	74	150002608	BVU_2864	-	Xaa tRNA
3635249	3635321	-	73	150002608	BVU_2868	-	Xaa tRNA
3648475	3648550	-	76	150002608	BVU_2883	-	^{04 Glu tRNA}
3648903	3648992	-	90	150002608	BVU_2884	-	^{08 Ser tRNA}
3649671	3649745	-	75	150002608	BVU_2886	-	^{19 Cys tRNA}
3770740	3770813	+	74	150002608	BVU_2975	-	^{06 Asp tRNA}
3838191	3838264	+	74	150002608	BVU_3031	-	^{02 Ala tRNA}
3881472	3881547	-	76	150002608	BVU_3068	-	^{10 Lys tRNA}
3881565	3881640	-	76	150002608	BVU_3069	-	^{10 Lys tRNA}
3881662	3881737	-	76	150002608	BVU_3070	-	^{10 Lys tRNA}
3943164	3943236	+	73	150002608	BVU_3118	-	^{01 Gly tRNA}
3958542	3958639	+	98	150002608	BVU_3138	-	^{01 Gly tRNA}
4005155	4005229	+	75	150002608	BVU_3178	-	^{03 Pro tRNA}
4018554	4018627	+	74	150002608	BVU_3192	-	^{03 Pro tRNA}
4140343	4140419	+	77	150002608	BVU_3302	-	^{11 Arg tRNA}
4140446	4140522	+	77	150002608	BVU_3303	-	^{11 Arg tRNA}
4140540	4140616	+	77	150002608	BVU_3304	-	^{11 Arg tRNA}
4389394	4389469	-	76	150002608	BVU_3531	-	^{01 Gly tRNA}
4389482	4389565	-	84	150002608	BVU_3532	-	^{15 Leu tRNA}
4389613	4389685	-	73	150002608	BVU_3533	-	^{01 Gly tRNA}
4389699	4389785	-	87	150002608	BVU_3534	-	^{15 Leu tRNA}
4389806	4389889	-	84	150002608	BVU_3535	-	^{15 Leu tRNA}
4389937	4390009	-	73	150002608	BVU_3536	-	^{01 Gly tRNA}
4426898	4427051	-	154	150002608	BVU_3568	-	5S ribosomal RNA
4427224	4430024	-	2801	150002608	BVU_3569	-	23S ribosomal RNA
4430156	4430229	-	74	150002608	BVU_3570	-	^{02 Ala tRNA}
4430244	4430320	-	77	150002608	BVU_3571	-	^{14 Ile tRNA}
4430477	4431986	-	1510	150002608	BVU_3572	-	16S ribosomal RNA
4739563	4739713	-	151	150002608	BVU_3837	-	5S ribosomal RNA
4739983	4742686	-	2704	150002608	BVU_3838	-	23S ribosomal RNA
4742818	4742891	-	74	150002608	BVU_3839	-	^{02 Ala tRNA}
4742906	4742982	-	77	150002608	BVU_3840	-	^{14 Ile tRNA}
4743140	4744649	-	1510	150002608	BVU_3841	-	16S ribosomal RNA
4750932	4751005	-	74	150002608	BVU_3847	-	^{06 Asp tRNA}
4751032	4751108	-	77	150002608	BVU_3848	-	^{06 Asp tRNA}
4751136	4751212	-	77	150002608	BVU_3849	-	^{06 Asp tRNA}
4945067	4945142	-	76	150002608	BVU_4012	-	^{12 Thr tRNA}
5109224	5109298	-	75	150002608	BVU_4146	-	^{11 Arg tRNA}