Геном прокариот/Материалы:NC 009632

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   LOCUS       NC_009632            2906507 bp    DNA     circular BCT 03-JUL-2007
   DEFINITION  Staphylococcus aureus subsp. aureus JH1, complete genome.
   ACCESSION   NC_009632
   VERSION     NC_009632.1  GI:150392480
   KEYWORDS    .
   SOURCE      Staphylococcus aureus subsp. aureus JH1
     ORGANISM  Staphylococcus aureus subsp. aureus JH1
               Bacteria; Firmicutes; Bacillales; Staphylococcus.
   REFERENCE   1  (bases 1 to 2906507)
     AUTHORS   Copeland,A., Lucas,S., Lapidus,A., Barry,K., Detter,J.C., Glavina
               del Rio,T., Hammon,N., Israni,S., Dalin,E., Tice,H., Pitluck,S.,
               Chain,P., Malfatti,S., Shin,M., Vergez,L., Schmutz,J., Larimer,F.,
               Land,M., Hauser,L., Kyrpides,N., Ivanova,N., Tomasz,A. and
               Richardson,P.
     CONSRTM   US DOE Joint Genome Institute
     TITLE     Complete sequence of chromosome of Staphylococcus aureus subsp.
               aureus JH1
     JOURNAL   Unpublished
   REFERENCE   2  (bases 1 to 2906507)
     CONSRTM   NCBI Genome Project
     TITLE     Direct Submission
     JOURNAL   Submitted (03-JUL-2007) National Center for Biotechnology
               Information, NIH, Bethesda, MD 20894, USA
   REFERENCE   3  (bases 1 to 2906507)
     AUTHORS   Copeland,A., Lucas,S., Lapidus,A., Barry,K., Detter,J.C., Glavina
               del Rio,T., Hammon,N., Israni,S., Dalin,E., Tice,H., Pitluck,S.,
               Chain,P., Malfatti,S., Shin,M., Vergez,L., Schmutz,J., Larimer,F.,
               Land,M., Hauser,L., Kyrpides,N., Ivanova,N., Tomasz,A. and
               Richardson,P.
     CONSRTM   US DOE Joint Genome Institute
     TITLE     Direct Submission
     JOURNAL   Submitted (20-JUN-2007) US DOE Joint Genome Institute, 2800
               Mitchell Drive B100, Walnut Creek, CA 94598-1698, USA
   COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
               NCBI review. The reference sequence was derived from CP000736.
               URL -- http://www.jgi.doe.gov
               JGI Project ID: 4001072
               Source DNA and bacteria available from Alexander Tomasz
               (tomasz@rockefeller.edu)
               Contacts: Alexander Tomasz (tomasz@rockefeller.edu)
                         Paul Richardson (microbes@cuba.jgi-psf.org)
               Quality assurance done by JGI-Stanford
               Annotation done by JGI-ORNL and JGI-PGF
               Finishing done by JGI-LLNL
               Finished microbial genomes have been curated to close all gaps with
               greater than 98% coverage of at least two independent clones. Each
               base pair has a minimum q (quality) value of 30 and the total error
               rate is less than one per 50000.
               The JGI and collaborators endorse the principles for the
               distribution and use of large scale sequencing data adopted by the
               larger genome sequencing community and urge users of this data to
               follow them. It is our intention to publish the work of this
               project in a timely fashion and we welcome collaborative
               interaction on the project and analysis.
               (http://www.genome.gov/page.cfm?pageID=10506376).
               COMPLETENESS: full length.


Расположение РНК[править]

Начало Конец Направление Длина PID Ген COG Комментарий
24284 24358 + 75 150392480 SaurJH1_R0001 - 04 Glu tRNA
24366 24438 + 73 150392480 SaurJH1_R0002 - 06 Asp tRNA
532244 532336 + 93 150392480 SaurJH1_R0003 - 08 Ser tRNA
536869 536969 + 101 150392480 SaurJH1_R0004 - SRP RNA; RNA component of signal recognition particle
541500 543044 + 1545 150392480 SaurJH1_R0005 - 16S ribosomal RNA
543411 546333 + 2923 150392480 SaurJH1_R0006 - 23S ribosomal RNA
546408 546521 + 114 150392480 SaurJH1_R0007 - 5S ribosomal RNA
584840 584953 + 114 150392480 SaurJH1_R0008 - 5S ribosomal RNA
584965 585040 + 76 150392480 SaurJH1_R0009 - 13 Val tRNA
585057 585132 + 76 150392480 SaurJH1_R0010 - 12 Thr tRNA
585139 585211 + 73 150392480 SaurJH1_R0011 - 10 Lys tRNA
585245 585319 + 75 150392480 SaurJH1_R0012 - 01 Gly tRNA
585327 585415 + 89 150392480 SaurJH1_R0013 - 15 Leu tRNA
585421 585497 + 77 150392480 SaurJH1_R0014 - 11 Arg tRNA
585518 585591 + 74 150392480 SaurJH1_R0015 - 03 Pro tRNA
585615 585690 + 76 150392480 SaurJH1_R0016 - 02 Ala tRNA
585819 587363 + 1545 150392480 SaurJH1_R0017 - 16S ribosomal RNA
587458 587534 + 77 150392480 SaurJH1_R0018 - 14 Ile tRNA
587702 590624 + 2923 150392480 SaurJH1_R0019 - 23S ribosomal RNA
590699 590812 + 114 150392480 SaurJH1_R0020 - 5S ribosomal RNA
591031 592575 + 1545 150392480 SaurJH1_R0021 - 16S ribosomal RNA
592880 595802 + 2923 150392480 SaurJH1_R0022 - 23S ribosomal RNA
595877 595990 + 114 150392480 SaurJH1_R0023 - 5S ribosomal RNA
869239 869310 - 72 150392480 SaurJH1_R0024 - 11 Arg tRNA
885496 885856 + 361 150392480 SaurJH1_R0025 - tmRNA
1127147 1127235 - 89 150392480 SaurJH1_R0026 - 08 Ser tRNA
1127238 1127312 - 75 150392480 SaurJH1_R0027 - 07 Asn tRNA
1276646 1276719 - 74 150392480 SaurJH1_R0028 - 11 Arg tRNA
2003968 2004056 - 89 150392480 SaurJH1_R0029 - 08 Ser tRNA
2004111 2004182 - 72 150392480 SaurJH1_R0030 - 04 Glu tRNA
2004184 2004258 - 75 150392480 SaurJH1_R0031 - 07 Asn tRNA
2004276 2004349 - 74 150392480 SaurJH1_R0032 - 01 Gly tRNA
2004365 2004440 - 76 150392480 SaurJH1_R0033 - 09 His tRNA
2004454 2004526 - 73 150392480 SaurJH1_R0034 - 17 Phe tRNA
2004543 2004618 - 76 150392480 SaurJH1_R0035 - 06 Asp tRNA
2004640 2004713 - 74 150392480 SaurJH1_R0036 - 16 Met tRNA
2039859 2039942 - 84 150392480 SaurJH1_R0037 - 15 Leu tRNA
2039981 2040055 - 75 150392480 SaurJH1_R0038 - Xaa tRNA
2040159 2040233 - 75 150392480 SaurJH1_R0039 - 01 Gly tRNA
2040241 2040314 - 74 150392480 SaurJH1_R0040 - 19 Cys tRNA
2040320 2040391 - 72 150392480 SaurJH1_R0041 - 05 Gln tRNA
2040403 2040475 - 73 150392480 SaurJH1_R0042 - 09 His tRNA
2040478 2040551 - 74 150392480 SaurJH1_R0043 - 20 Trp tRNA
2040567 2040647 - 81 150392480 SaurJH1_R0044 - 18 Tyr tRNA
2040653 2040728 - 76 150392480 SaurJH1_R0045 - 12 Thr tRNA
2040736 2040808 - 73 150392480 SaurJH1_R0046 - 17 Phe tRNA
2040827 2040902 - 76 150392480 SaurJH1_R0047 - 06 Asp tRNA
2040924 2040997 - 74 150392480 SaurJH1_R0048 - 16 Met tRNA
2041012 2041104 - 93 150392480 SaurJH1_R0049 - 08 Ser tRNA
2041143 2041218 - 76 150392480 SaurJH1_R0050 - 06 Asp tRNA
2041229 2041318 - 90 150392480 SaurJH1_R0051 - 08 Ser tRNA
2041328 2041401 - 74 150392480 SaurJH1_R0052 - 16 Met tRNA
2041427 2041503 - 77 150392480 SaurJH1_R0053 - 16 Met tRNA
2041525 2041600 - 76 150392480 SaurJH1_R0054 - 02 Ala tRNA
2041618 2041691 - 74 150392480 SaurJH1_R0055 - 03 Pro tRNA
2041701 2041774 - 74 150392480 SaurJH1_R0056 - 11 Arg tRNA
2041793 2041881 - 89 150392480 SaurJH1_R0057 - 15 Leu tRNA
2041892 2041966 - 75 150392480 SaurJH1_R0058 - 01 Gly tRNA
2041970 2042051 - 82 150392480 SaurJH1_R0059 - 15 Leu tRNA
2042055 2042130 - 76 150392480 SaurJH1_R0060 - 10 Lys tRNA
2042136 2042211 - 76 150392480 SaurJH1_R0061 - 12 Thr tRNA
2042228 2042303 - 76 150392480 SaurJH1_R0062 - 13 Val tRNA
2042314 2042427 - 114 150392480 SaurJH1_R0063 - 5S ribosomal RNA
2042502 2045424 - 2923 150392480 SaurJH1_R0064 - 23S ribosomal RNA
2045638 2045713 - 76 150392480 SaurJH1_R0065 - 02 Ala tRNA
2045732 2045808 - 77 150392480 SaurJH1_R0066 - 14 Ile tRNA
2045900 2047444 - 1545 150392480 SaurJH1_R0067 - 16S ribosomal RNA
2215264 2215377 - 114 150392480 SaurJH1_R0068 - 5S ribosomal RNA
2215452 2218374 - 2923 150392480 SaurJH1_R0069 - 23S ribosomal RNA
2218846 2220390 - 1545 150392480 SaurJH1_R0070 - 16S ribosomal RNA
2220516 2220589 - 74 150392480 SaurJH1_R0071 - 01 Gly tRNA
2220608 2220693 - 86 150392480 SaurJH1_R0072 - 15 Leu tRNA
2329835 2329910 - 76 150392480 SaurJH1_R0073 - 10 Lys tRNA
2329914 2329988 - 75 150392480 SaurJH1_R0074 - 05 Gln tRNA
2329998 2330081 - 84 150392480 SaurJH1_R0075 - 18 Tyr tRNA
2330111 2330186 - 76 150392480 SaurJH1_R0076 - 13 Val tRNA
2330194 2330265 - 72 150392480 SaurJH1_R0077 - 04 Glu tRNA
2330267 2330341 - 75 150392480 SaurJH1_R0078 - 07 Asn tRNA
2330351 2330464 - 114 150392480 SaurJH1_R0079 - 5S ribosomal RNA
2330539 2333461 - 2923 150392480 SaurJH1_R0080 - 23S ribosomal RNA
2333933 2335477 - 1545 150392480 SaurJH1_R0081 - 16S ribosomal RNA