Геном прокариот/Материалы:NC 009662

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Эта статья — часть материалов: лаборатории Биоинформатика, исследовательского проекта «Геном прокариот»

   LOCUS       NC_009662            1877931 bp    DNA     circular BCT 25-JUL-2007
   DEFINITION  Nitratiruptor sp. SB155-2, complete genome.
   ACCESSION   NC_009662
   VERSION     NC_009662.1  GI:152989753
   KEYWORDS    .
   SOURCE      Nitratiruptor sp. SB155-2
     ORGANISM  Nitratiruptor sp. SB155-2
               Bacteria; Proteobacteria; Epsilonproteobacteria; Nitratiruptor.
   REFERENCE   1
     AUTHORS   Nakagawa,S., Takaki,Y., Shimamura,S., Reysenbach,A.L., Takai,K. and
               Horikoshi,K.
     TITLE     Deep-sea vent epsilon-proteobacterial genomes provide insights into
               emergence of pathogens
     JOURNAL   Proc. Natl. Acad. Sci. U.S.A. (2007) In press
   REFERENCE   2
     AUTHORS   Nakagawa,S., Takai,K., Inagaki,F., Hirayama,H., Nunoura,T.,
               Horikoshi,K. and Sako,Y.
     TITLE     Distribution, phylogenetic diversity and physiological
               characteristics of epsilon-Proteobacteria in a deep-sea
               hydrothermal field
     JOURNAL   Environ. Microbiol. 7 (10), 1619-1632 (2005)
      PUBMED   16156735
   REFERENCE   3  (bases 1 to 1877931)
     CONSRTM   NCBI Genome Project
     TITLE     Direct Submission
     JOURNAL   Submitted (24-JUL-2007) National Center for Biotechnology
               Information, NIH, Bethesda, MD 20894, USA
   REFERENCE   4  (bases 1 to 1877931)
     AUTHORS   Takaki,Y., Nakagawa,S., Shimamura,S., Takai,K. and Horikoshi,K.
     TITLE     Direct Submission
     JOURNAL   Submitted (25-MAY-2006) Yoshihiro Takaki, Japan Agency for
               Maine-Earth Science and Technology, Extremobiosphere Research
               Center; 2-15 Natsushima-cho, Yokosuka, Kanagawa 237-0026, Japan
               (E-mail:takakiy@jamstec.go.jp, URL:http://www.jamstec.go.jp,
               Tel:81-46-867-9648, Fax:81-46-867-9645)
   COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
               NCBI review. The reference sequence was derived from AP009178.
               COMPLETENESS: full length.

Расположение РНК[править]

Начало	Конец	Направление	Длина	PID	Ген	COG	Комментарий
98023	98097	+	75	152989753	NIS_t01	-	^{13 Val tRNA}
116835	116910	+	76	152989753	NIS_t02	-	^{01 Gly tRNA}
117052	117139	+	88	152989753	NIS_t03	-	^{15 Leu tRNA}
117152	117226	+	75	152989753	NIS_t04	-	^{19 Cys tRNA}
117241	117332	+	92	152989753	NIS_t05	-	^{08 Ser tRNA}
117379	117469	+	91	152989753	NIS_t06	-	^{08 Ser tRNA}
198995	199072	+	78	152989753	NIS_t07	-	^{03 Pro tRNA}
199104	199180	+	77	152989753	NIS_t08	-	^{09 His tRNA}
199239	199315	+	77	152989753	NIS_t09	-	^{11 Arg tRNA}
199337	199413	+	77	152989753	NIS_t10	-	^{11 Arg tRNA}
199420	199504	+	85	152989753	NIS_t11	-	^{15 Leu tRNA}
216401	216476	-	76	152989753	NIS_t12	-	^{02 Ala tRNA}
247934	248010	+	77	152989753	NIS_t13	-	^{12 Thr tRNA}
248042	248127	+	86	152989753	NIS_t14	-	^{18 Tyr tRNA}
248133	248209	+	77	152989753	NIS_t15	-	^{01 Gly tRNA}
248297	248371	+	75	152989753	NIS_t16	-	^{12 Thr tRNA}
249878	249953	+	76	152989753	NIS_t17	-	^{20 Trp tRNA}
265170	265243	+	74	152989753	NIS_t18	-	^{11 Arg tRNA}
298686	298762	+	77	152989753	NIS_t19	-	^{11 Arg tRNA}
306593	306668	-	76	152989753	NIS_t20	-	^{17 Phe tRNA}
388976	390515	+	1540	152989753	NIS_r01	-	16S ribosomal RNA
390688	390764	+	77	152989753	NIS_t21	-	^{14 Ile tRNA}
390857	390932	+	76	152989753	NIS_t22	-	^{02 Ala tRNA}
391108	394004	+	2897	152989753	NIS_r02	-	23S ribosomal RNA
394122	394237	+	116	152989753	NIS_r03	-	5S ribosomal RNA
473003	473077	-	75	152989753	NIS_t23	-	^{07 Asn tRNA}
503972	504048	+	77	152989753	NIS_t24	-	^{16 Met tRNA}
505243	505334	-	92	152989753	NIS_t25	-	^{08 Ser tRNA}
654527	656067	+	1541	152989753	NIS_r04	-	16S ribosomal RNA
656240	656316	+	77	152989753	NIS_t26	-	^{14 Ile tRNA}
656409	656484	+	76	152989753	NIS_t27	-	^{02 Ala tRNA}
656662	659559	+	2898	152989753	NIS_r05	-	23S ribosomal RNA
659677	659792	+	116	152989753	NIS_r06	-	5S ribosomal RNA
730991	731067	-	77	152989753	NIS_t28	-	^{16 Met tRNA}
731075	731149	-	75	152989753	NIS_t29	-	^{05 Gln tRNA}
744164	744238	-	75	152989753	NIS_t30	-	^{04 Glu tRNA}
759684	759760	-	77	152989753	NIS_t31	-	^{16 Met tRNA}
827084	827159	-	76	152989753	NIS_t32	-	^{01 Gly tRNA}
827162	827248	-	87	152989753	NIS_t33	-	^{15 Leu tRNA}
1254858	1254932	+	75	152989753	NIS_t34	-	^{05 Gln tRNA}
1254940	1255016	+	77	152989753	NIS_t35	-	^{16 Met tRNA}
1301793	1301868	+	76	152989753	NIS_t36	-	^{10 Lys tRNA}
1301874	1301949	+	76	152989753	NIS_t37	-	^{04 Glu tRNA}
1301956	1302031	+	76	152989753	NIS_t38	-	^{13 Val tRNA}
1302035	1302111	+	77	152989753	NIS_t39	-	^{06 Asp tRNA}
1341304	1341391	-	88	152989753	NIS_t40	-	^{15 Leu tRNA}
1687596	1687673	+	78	152989753	NIS_t41	-	^{03 Pro tRNA}
1709267	1709343	+	77	152989753	NIS_t42	-	^{12 Thr tRNA}
1714997	1715072	+	76	152989753	NIS_t43	-	^{10 Lys tRNA}
1856251	1856366	-	116	152989753	NIS_r07	-	5S ribosomal RNA
1856484	1859381	-	2898	152989753	NIS_r08	-	23S ribosomal RNA
1859559	1859634	-	76	152989753	NIS_t44	-	^{02 Ala tRNA}
1859727	1859803	-	77	152989753	NIS_t45	-	^{14 Ile tRNA}
1859976	1861516	-	1541	152989753	NIS_r09	-	16S ribosomal RNA