Геном прокариот/Материалы:NC 009699

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Эта статья — часть материалов: лаборатории Биоинформатика, исследовательского проекта «Геном прокариот»

   LOCUS       NC_009699            3995387 bp    DNA     circular BCT 06-SEP-2007
   DEFINITION  Clostridium botulinum F str. Langeland, complete genome.
   ACCESSION   NC_009699
   VERSION     NC_009699.1  GI:153937894
   KEYWORDS    .
   SOURCE      Clostridium botulinum F str. Langeland
     ORGANISM  Clostridium botulinum F str. Langeland
               Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae;
               Clostridium.
   REFERENCE   1  (bases 1 to 3995387)
     CONSRTM   NCBI Genome Project
     TITLE     Direct Submission
     JOURNAL   Submitted (26-JUL-2007) National Center for Biotechnology
               Information, NIH, Bethesda, MD 20894, USA
   REFERENCE   2  (bases 1 to 3995387)
     AUTHORS   Brinkac,L.M., Daugherty,S., Dodson,R.J., Madupu,R., Brown,J.L.,
               Bruce,D., Detter,C., Munk,C., Smith,L.A., Smith,T.J., White,O. and
               Brettin,T.S.
     TITLE     Direct Submission
     JOURNAL   Submitted (15-JUN-2007) Los Alamos National Laboratory, Los Alamos,
               NM, USA
   COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
               NCBI review. The reference sequence was derived from CP000728.
               The authors wish to acknowledge the Intelligence Technology
               Innovation Center for funding the sequencing and the NIH/NIAID for
               funding the annotation at the Pathema Bioinformatics Resource
               Center. For more information about this strain contact Theresa
               Smith, Integrated Toxicology, United States Army Medical Institute
               of Infectious Diseases, theresa.smith@amedd.army.mil.
               COMPLETENESS: full length.

Расположение РНК[править]

Начало	Конец	Направление	Длина	PID	Ген	COG	Комментарий
9253	10754	+	1502	153937894	CLI_0009	-	16S ribosomal RNA
10912	13813	+	2902	153937894	CLI_0012	-	23S ribosomal RNA
13907	14023	+	117	153937894	CLI_0013	-	5S ribosomal RNA
14031	14109	+	79	153937894	CLI_0016	-	^{16 Met tRNA}
14032	14108	+	77	153937894	CLI_0015	-	^{16 Met tRNA}
14111	14188	+	78	153937894	CLI_0018	-	^{02 Ala tRNA}
14112	14187	+	76	153937894	CLI_0017	-	^{02 Ala tRNA}
23823	23915	+	93	153937894	CLI_0028	-	^{08 Ser tRNA}
23824	23914	+	91	153937894	CLI_0027	-	^{08 Ser tRNA}
23934	24026	+	93	153937894	CLI_0030	-	^{08 Ser tRNA}
23935	24025	+	91	153937894	CLI_0029	-	^{08 Ser tRNA}
25557	25649	+	93	153937894	CLI_0033	-	^{08 Ser tRNA}
25558	25648	+	91	153937894	CLI_0032	-	^{08 Ser tRNA}
25668	25760	+	93	153937894	CLI_0035	-	^{08 Ser tRNA}
25669	25759	+	91	153937894	CLI_0034	-	^{08 Ser tRNA}
25843	25921	+	79	153937894	CLI_0037	-	^{11 Arg tRNA}
25844	25920	+	77	153937894	CLI_0036	-	^{11 Arg tRNA}
29125	29201	+	77	153937894	CLI_0041	-	^{11 Arg tRNA}
32972	33063	+	92	153937894	CLI_0046	-	^{08 Ser tRNA}
32973	33062	+	90	153937894	CLI_0045	-	^{08 Ser tRNA}
43810	45311	+	1502	153937894	CLI_0060	-	16S ribosomal RNA
45533	48434	+	2902	153937894	CLI_0063	-	23S ribosomal RNA
48486	48602	+	117	153937894	CLI_0064	-	5S ribosomal RNA
48608	48685	+	78	153937894	CLI_0066	-	^{10 Lys tRNA}
48609	48684	+	76	153937894	CLI_0065	-	^{10 Lys tRNA}
50328	51829	+	1502	153937894	CLI_0068	-	16S ribosomal RNA
51987	54889	+	2903	153937894	CLI_0071	-	23S ribosomal RNA
54940	55056	+	117	153937894	CLI_0072	-	5S ribosomal RNA
55062	55139	+	78	153937894	CLI_0074	-	^{10 Lys tRNA}
55063	55138	+	76	153937894	CLI_0073	-	^{10 Lys tRNA}
58128	59629	+	1502	153937894	CLI_0077	-	16S ribosomal RNA
59851	62752	+	2902	153937894	CLI_0080	-	23S ribosomal RNA
62804	62920	+	117	153937894	CLI_0081	-	5S ribosomal RNA
62928	63003	+	76	153937894	CLI_t01	-	^{17 Phe tRNA}
65133	66634	+	1502	153937894	CLI_0089	-	16S ribosomal RNA
66792	69692	+	2901	153937894	CLI_0092	-	23S ribosomal RNA
69743	69859	+	117	153937894	CLI_0093	-	5S ribosomal RNA
69867	69942	+	76	153937894	CLI_t02	-	^{17 Phe tRNA}
71347	72848	+	1502	153937894	CLI_0098	-	16S ribosomal RNA
73006	75906	+	2901	153937894	CLI_0101	-	23S ribosomal RNA
75957	76073	+	117	153937894	CLI_0102	-	5S ribosomal RNA
77255	77328	+	74	153937894	CLI_0104	-	^{19 Cys tRNA}
195249	195326	+	78	153937894	CLI_0226	-	^{13 Val tRNA}
195250	195325	+	76	153937894	CLI_0225	-	^{13 Val tRNA}
195343	195418	+	76	153937894	CLI_0227	-	^{12 Thr tRNA}
195423	195509	+	87	153937894	CLI_0229	-	^{18 Tyr tRNA}
195424	195508	+	85	153937894	CLI_0228	-	^{18 Tyr tRNA}
222348	222424	-	77	153937894	CLI_0251	-	^{05 Gln tRNA}
222349	222423	-	75	153937894	CLI_0252	-	^{05 Gln tRNA}
500144	501645	+	1502	153937894	CLI_0490	-	16S ribosomal RNA
501788	501865	+	78	153937894	CLI_0492	-	^{02 Ala tRNA}
501789	501864	+	76	153937894	CLI_0491	-	^{02 Ala tRNA}
501870	501946	+	77	153937894	CLI_0493	-	^{14 Ile tRNA}
502080	504981	+	2902	153937894	CLI_0496	-	23S ribosomal RNA
505112	505228	+	117	153937894	CLI_0497	-	5S ribosomal RNA
505236	505312	+	77	153937894	CLI_0499	-	^{07 Asn tRNA}
505237	505311	+	75	153937894	CLI_0498	-	^{07 Asn tRNA}
580277	580351	+	75	153937894	CLI_0562	-	^{04 Glu tRNA}
3208314	3208410	-	97	153937894	CLI_3027	-	Sec tRNA
3208319	3208409	-	91	153937894	CLI_3028	-	Sec tRNA
3242884	3242968	-	85	153937894	CLI_3065	-	^{15 Leu tRNA}
3273404	3273492	-	89	153937894	CLI_3103	-	^{15 Leu tRNA}
3273405	3273491	-	87	153937894	CLI_3104	-	^{15 Leu tRNA}
3387097	3387170	-	74	153937894	CLI_3201	-	^{19 Cys tRNA}
3387180	3387254	-	75	153937894	CLI_3202	-	^{01 Gly tRNA}
3387258	3387335	-	78	153937894	CLI_3203	-	^{17 Phe tRNA}
3387259	3387334	-	76	153937894	CLI_3204	-	^{17 Phe tRNA}
3387337	3387415	-	79	153937894	CLI_3205	-	^{06 Asp tRNA}
3387338	3387414	-	77	153937894	CLI_3206	-	^{06 Asp tRNA}
3387420	3387495	-	76	153937894	CLI_3207	-	^{13 Val tRNA}
3556046	3556122	-	77	153937894	CLI_3396	-	^{11 Arg tRNA}
3556148	3556221	-	74	153937894	CLI_3397	-	^{01 Gly tRNA}
3556250	3556327	-	78	153937894	CLI_3398	-	^{03 Pro tRNA}
3556251	3556326	-	76	153937894	CLI_3399	-	^{03 Pro tRNA}
3556353	3556428	-	76	153937894	CLI_3400	-	^{10 Lys tRNA}
3556433	3556511	-	79	153937894	CLI_3401	-	^{11 Arg tRNA}
3556434	3556510	-	77	153937894	CLI_3402	-	^{11 Arg tRNA}
3556517	3556590	-	74	153937894	CLI_3403	-	^{01 Gly tRNA}
3556599	3556673	-	75	153937894	CLI_3404	-	^{01 Gly tRNA}
3556739	3556824	-	86	153937894	CLI_3405	-	^{15 Leu tRNA}
3556740	3556823	-	84	153937894	CLI_3406	-	^{15 Leu tRNA}
3556838	3556915	-	78	153937894	CLI_3407	-	^{10 Lys tRNA}
3556839	3556914	-	76	153937894	CLI_3408	-	^{10 Lys tRNA}
3556917	3556993	-	77	153937894	CLI_3409	-	^{05 Gln tRNA}
3556918	3556992	-	75	153937894	CLI_3410	-	^{05 Gln tRNA}
3556996	3557073	-	78	153937894	CLI_3411	-	^{09 His tRNA}
3556997	3557072	-	76	153937894	CLI_3412	-	^{09 His tRNA}
3557088	3557163	-	76	153937894	CLI_3413	-	^{10 Lys tRNA}
3557168	3557246	-	79	153937894	CLI_3414	-	^{11 Arg tRNA}
3557169	3557245	-	77	153937894	CLI_3415	-	^{11 Arg tRNA}
3557252	3557325	-	74	153937894	CLI_3416	-	^{01 Gly tRNA}
3557334	3557408	-	75	153937894	CLI_3417	-	^{01 Gly tRNA}
3557475	3557560	-	86	153937894	CLI_3418	-	^{15 Leu tRNA}
3557476	3557559	-	84	153937894	CLI_3419	-	^{15 Leu tRNA}
3557574	3557651	-	78	153937894	CLI_3420	-	^{10 Lys tRNA}
3557575	3557650	-	76	153937894	CLI_3421	-	^{10 Lys tRNA}
3557653	3557729	-	77	153937894	CLI_3422	-	^{05 Gln tRNA}
3557654	3557728	-	75	153937894	CLI_3423	-	^{05 Gln tRNA}
3557732	3557809	-	78	153937894	CLI_3424	-	^{09 His tRNA}
3557733	3557808	-	76	153937894	CLI_3425	-	^{09 His tRNA}
3557815	3557893	-	79	153937894	CLI_3426	-	^{11 Arg tRNA}
3557816	3557892	-	77	153937894	CLI_3427	-	^{11 Arg tRNA}
3557899	3557972	-	74	153937894	CLI_3428	-	^{01 Gly tRNA}
3557979	3558056	-	78	153937894	CLI_3429	-	^{03 Pro tRNA}
3557980	3558055	-	76	153937894	CLI_3430	-	^{03 Pro tRNA}
3629335	3629412	-	78	153937894	CLI_3487	-	^{20 Trp tRNA}
3629336	3629411	-	76	153937894	CLI_3488	-	^{20 Trp tRNA}
3827939	3828014	-	76	153937894	CLI_3680	-	^{12 Thr tRNA}
3828032	3828108	-	77	153937894	CLI_3681	-	^{01 Gly tRNA}
3828033	3828107	-	75	153937894	CLI_3682	-	^{01 Gly tRNA}
3848783	3848859	-	77	153937894	CLI_3702	-	^{07 Asn tRNA}
3848784	3848858	-	75	153937894	CLI_3703	-	^{07 Asn tRNA}
3848885	3848961	-	77	153937894	CLI_3704	-	^{07 Asn tRNA}
3848886	3848960	-	75	153937894	CLI_3705	-	^{07 Asn tRNA}
3848969	3849085	-	117	153937894	CLI_3706	-	5S ribosomal RNA
3849177	3852077	-	2901	153937894	CLI_3707	-	23S ribosomal RNA
3852153	3852229	-	77	153937894	CLI_3710	-	^{14 Ile tRNA}
3852316	3853817	-	1502	153937894	CLI_3711	-	16S ribosomal RNA
3854043	3854120	-	78	153937894	CLI_3713	-	^{02 Ala tRNA}
3854044	3854119	-	76	153937894	CLI_3714	-	^{02 Ala tRNA}
3854123	3854199	-	77	153937894	CLI_t03	-	^{16 Met tRNA}
3854207	3854323	-	117	153937894	CLI_3718	-	5S ribosomal RNA
3854414	3857315	-	2902	153937894	CLI_3719	-	23S ribosomal RNA
3857537	3859038	-	1502	153937894	CLI_3722	-	16S ribosomal RNA
3877018	3877096	-	79	153937894	CLI_3737	-	^{16 Met tRNA}
3877019	3877095	-	77	153937894	CLI_3738	-	^{16 Met tRNA}
3877105	3877182	-	78	153937894	CLI_3739	-	^{16 Met tRNA}
3877234	3877311	-	78	153937894	CLI_3740	-	^{16 Met tRNA}
3877314	3877404	-	91	153937894	CLI_3741	-	^{15 Leu tRNA}
3877315	3877403	-	89	153937894	CLI_3742	-	^{15 Leu tRNA}
3877434	3877512	-	79	153937894	CLI_3743	-	^{16 Met tRNA}
3877435	3877511	-	77	153937894	CLI_3744	-	^{16 Met tRNA}
3877515	3877592	-	78	153937894	CLI_3745	-	^{16 Met tRNA}
3877516	3877591	-	76	153937894	CLI_3746	-	^{16 Met tRNA}
3877595	3877685	-	91	153937894	CLI_3747	-	^{15 Leu tRNA}
3877596	3877684	-	89	153937894	CLI_3748	-	^{15 Leu tRNA}
3898613	3898690	+	78	153937894	CLI_3771	-	^{03 Pro tRNA}
3898614	3898689	+	76	153937894	CLI_3770	-	^{03 Pro tRNA}
3961121	3961198	-	78	153937894	CLI_3846	-	^{13 Val tRNA}
3961122	3961197	-	76	153937894	CLI_3847	-	^{13 Val tRNA}
3961215	3961291	-	77	153937894	CLI_3848	-	^{04 Glu tRNA}
3961216	3961290	-	75	153937894	CLI_3849	-	^{04 Glu tRNA}
3961296	3961371	-	76	153937894	CLI_3850	-	^{12 Thr tRNA}
3961375	3961453	-	79	153937894	CLI_3851	-	^{06 Asp tRNA}
3961376	3961452	-	77	153937894	CLI_3852	-	^{06 Asp tRNA}
3961461	3961538	-	78	153937894	CLI_3853	-	^{13 Val tRNA}
3961462	3961537	-	76	153937894	CLI_3854	-	^{13 Val tRNA}
3961555	3961629	-	75	153937894	CLI_3855	-	^{04 Glu tRNA}