Геном прокариот/Материалы:NC 009749

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Эта статья — часть материалов: лаборатории Биоинформатика, исследовательского проекта «Геном прокариот»

   LOCUS       NC_009749            1890909 bp    DNA     circular BCT 28-AUG-2007
   DEFINITION  Francisella tularensis subsp. holarctica FTNF002-00, complete genome.
   ACCESSION   NC_009749
   VERSION     NC_009749.1  GI:156501369
   KEYWORDS    .
   SOURCE      Francisella tularensis subsp. holarctica FTNF002-00
     ORGANISM  Francisella tularensis subsp. holarctica FTNF002-00
               Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales;
               Francisellaceae; Francisella.
   REFERENCE   1  (bases 1 to 1890909)
     CONSRTM   NCBI Genome Project
     TITLE     Direct Submission
     JOURNAL   Submitted (27-AUG-2007) National Center for Biotechnology
               Information, NIH, Bethesda, MD 20894, USA
   REFERENCE   2  (bases 1 to 1890909)
     AUTHORS   Godbole,S., Zhou,L., Bruce,D., Crawford,R., Detter,C.,
               Dempsey,M.P., Lion,C., Munk,C., Noronha,J., Scheuermann,R.H. and
               Brettin,T.S.
     TITLE     Direct Submission
     JOURNAL   Submitted (15-AUG-2007) BioHealthBase, 6000 Harry Hines Blvd,
               Dallas, TX 75390, USA
   COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
               NCBI review. The reference sequence was derived from CP000803.
               Souce DNA and bacteria available from Dr. Tom Brettin
               (brettin@lanl.gov) or Dr. Michael P. Dempsey
               (michael.dempsey@pentagon.af.mil); The sequencing of Francisella
               tularensis subspecies holarctica genome was performed at the JGI
               production genomics facility in Walnut Creek, CA. Genome finishing
               was performed by the JGI at Los Alamos National Laboratory, Los
               Alamos, NM. Annotation was performed at BioHealthBase, a
               Bioinformatics Resource Center supported by the NIH/NIAID. The
               sequencing was supported by Intelligence Technology Innovation
               Center.
               COMPLETENESS: full length.

Расположение РНК[править]

Начало	Конец	Направление	Длина	PID	Ген	COG	Комментарий
22455	22872	-	418	156501369	FTA_2139	-	tmRNA
75460	75609	-	150	156501369	FTA_2133	-	FtaRFN1
124406	125934	+	1529	156501369	FTA_2130	-	16S ribosomal RNA
126030	126106	+	77	156501369	FTA_2118	-	^{14 Ile tRNA}
126121	126196	+	76	156501369	FTA_2096	-	^{02 Ala tRNA}
126186	129137	+	2952	156501369	FTA_2122	-	23S ribosomal RNA
129182	129296	+	115	156501369	FTA_2134	-	5S ribosomal RNA
158224	158298	+	75	156501369	FTA_2089	-	^{05 Gln tRNA}
222959	223034	+	76	156501369	FTA_2088	-	^{04 Glu tRNA}
269331	269620	+	290	156501369	FTA_2140	-	RNA component of RNaseP
292834	292908	-	75	156501369	FTA_2104	-	^{01 Gly tRNA}
292923	292999	-	77	156501369	FTA_2099	-	^{11 Arg tRNA}
327480	327569	+	90	156501369	FTA_2092	-	^{08 Ser tRNA}
415982	416073	+	92	156501369	FTA_2093	-	^{08 Ser tRNA}
416101	416176	+	76	156501369	FTA_2112	-	^{13 Val tRNA}
417393	418921	+	1529	156501369	FTA_2131	-	16S ribosomal RNA
419017	419093	+	77	156501369	FTA_2119	-	^{14 Ile tRNA}
419108	419183	+	76	156501369	FTA_2097	-	^{02 Ala tRNA}
419173	422124	+	2952	156501369	FTA_2123	-	23S ribosomal RNA
422169	422283	+	115	156501369	FTA_2135	-	5S ribosomal RNA
451867	451981	+	115	156501369	FTA_2137	-	5S ribosomal RNA
528800	528876	-	77	156501369	FTA_2108	-	^{16 Met tRNA}
608888	608974	+	87	156501369	FTA_2084	-	^{15 Leu tRNA}
638397	638472	-	76	156501369	FTA_2091	-	^{07 Asn tRNA}
645724	645798	+	75	156501369	FTA_2105	-	^{01 Gly tRNA}
645814	645887	+	74	156501369	FTA_2102	-	^{19 Cys tRNA}
645893	645981	+	89	156501369	FTA_2085	-	^{15 Leu tRNA}
1119712	1121240	+	1529	156501369	FTA_2132	-	16S ribosomal RNA
1121336	1121412	+	77	156501369	FTA_2120	-	^{14 Ile tRNA}
1121427	1121502	+	76	156501369	FTA_2098	-	^{02 Ala tRNA}
1121492	1124443	+	2952	156501369	FTA_2125	-	23S ribosomal RNA
1124488	1124602	+	115	156501369	FTA_2136	-	5S ribosomal RNA
1229484	1229560	+	77	156501369	FTA_2113	-	^{13 Val tRNA}
1292757	1292844	+	88	156501369	FTA_2094	-	^{08 Ser tRNA}
1347166	1347248	-	83	156501369	FTA_2086	-	^{15 Leu tRNA}
1347255	1347330	-	76	156501369	FTA_2090	-	^{09 His tRNA}
1347358	1347434	-	77	156501369	FTA_2100	-	^{11 Arg tRNA}
1347443	1347519	-	77	156501369	FTA_2117	-	^{03 Pro tRNA}
1347537	1347612	-	76	156501369	FTA_2107	-	^{17 Phe tRNA}
1410085	1410160	-	76	156501369	FTA_2083	-	^{10 Lys tRNA}
1458931	1459006	-	76	156501369	FTA_2114	-	^{13 Val tRNA}
1638666	1638742	+	77	156501369	FTA_2109	-	^{16 Met tRNA}
1643816	1643891	+	76	156501369	FTA_2101	-	^{11 Arg tRNA}
1644233	1644332	-	100	156501369	FTA_2138	-	RNA component of signal recognition particle
1680772	1680847	-	76	156501369	FTA_2095	-	^{20 Trp tRNA}
1682096	1682171	-	76	156501369	FTA_2115	-	^{12 Thr tRNA}
1682200	1682273	-	74	156501369	FTA_2106	-	^{01 Gly tRNA}
1682275	1682359	-	85	156501369	FTA_2111	-	^{18 Tyr tRNA}
1706127	1706212	-	86	156501369	FTA_2087	-	^{15 Leu tRNA}
1742084	1742160	-	77	156501369	FTA_2110	-	^{16 Met tRNA}
1888710	1888786	-	77	156501369	FTA_2103	-	^{06 Asp tRNA}
1888791	1888866	-	76	156501369	FTA_2116	-	^{12 Thr tRNA}