Геном прокариот/Материалы:NC 009879

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Эта статья — часть материалов: лаборатории Биоинформатика, исследовательского проекта «Геном прокариот»

   LOCUS       NC_009879            1159772 bp    DNA     linear   BCT 02-OCT-2007
   DEFINITION  Rickettsia canadensis str. McKiel, complete genome.
   ACCESSION   NC_009879
   VERSION     NC_009879.1  GI:157803189
   KEYWORDS    .
   SOURCE      Rickettsia canadensis str. McKiel
     ORGANISM  Rickettsia canadensis str. McKiel
               Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales;
               Rickettsiaceae; Rickettsieae; Rickettsia; typhus group.
   REFERENCE   1  (bases 1 to 1159772)
     AUTHORS   Madan,A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
               Sanchez,A., Whiting,M., Dasch,G. and Eremeeva,M.
     TITLE     Complete Genome Sequence of Rickettsia canadensis
     JOURNAL   Unpublished
   REFERENCE   2  (bases 1 to 1159772)
     CONSRTM   NCBI Genome Project
     TITLE     Direct Submission
     JOURNAL   Submitted (02-OCT-2007) National Center for Biotechnology
               Information, NIH, Bethesda, MD 20894, USA
   REFERENCE   3  (bases 1 to 1159772)
     AUTHORS   Madan,A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
               Sanchez,A., Whiting,M., Dasch,G. and Eremeeva,M.
     TITLE     Direct Submission
     JOURNAL   Submitted (10-SEP-2007) Neurogenomics Research Lab, University of
               Iowa, 200 B EMRB, Iowa City, IA 52242, USA
   COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
               NCBI review. The reference sequence was derived from CP000409.
               Annotation was added by the NCBI Prokaryotic Genomes Automatic
               Annotation Pipeline Group.  Information about the Pipeline can be
               found here:
               http://www.ncbi.nlm.nih.gov/genomes/static/Pipeline.html. Please be
               aware that the annotation is done automatically with little or no
               manual curation.
               COMPLETENESS: full length.

Расположение РНК[править]

Начало	Конец	Направление	Длина	PID	Ген	COG	Комментарий
8620	8695	-	76	157803189	A1E_t05682	-	^{17 Phe tRNA}
19274	19348	+	75	157803189	A1E_t05684	-	^{04 Glu tRNA}
87085	87159	+	75	157803189	A1E_t05686	-	^{12 Thr tRNA}
109832	109908	+	77	157803189	A1E_t05688	-	^{16 Met tRNA}
155537	155612	+	76	157803189	A1E_t05690	-	^{20 Trp tRNA}
185675	185750	-	76	157803189	A1E_t05692	-	^{12 Thr tRNA}
259101	259192	-	92	157803189	A1E_t05694	-	^{08 Ser tRNA}
272249	272367	+	119	157803189	A1E_r05748	-	5S ribosomal RNA
307168	307244	+	77	157803189	A1E_t05696	-	^{16 Met tRNA}
353735	353809	+	75	157803189	A1E_t05698	-	^{07 Asn tRNA}
385940	387447	+	1508	157803189	A1E_r05750	-	16S ribosomal RNA
428567	428641	-	75	157803189	A1E_t05700	-	^{01 Gly tRNA}
433200	433286	-	87	157803189	A1E_t05702	-	^{15 Leu tRNA}
445181	445255	+	75	157803189	A1E_t05704	-	^{02 Ala tRNA}
475101	475177	-	77	157803189	A1E_t05706	-	^{11 Arg tRNA}
516449	516523	+	75	157803189	A1E_t05708	-	^{05 Gln tRNA}
516641	516717	-	77	157803189	A1E_t05710	-	^{11 Arg tRNA}
530508	530597	+	90	157803189	A1E_t05712	-	^{08 Ser tRNA}
547405	547492	+	88	157803189	A1E_t05714	-	^{08 Ser tRNA}
552374	552449	-	76	157803189	A1E_t05716	-	^{02 Ala tRNA}
556129	556205	+	77	157803189	A1E_t05718	-	^{13 Val tRNA}
632465	632541	+	77	157803189	A1E_t05720	-	^{06 Asp tRNA}
727737	727813	-	77	157803189	A1E_t05722	-	^{14 Ile tRNA}
727837	727912	-	76	157803189	A1E_t05724	-	^{10 Lys tRNA}
752829	752903	-	75	157803189	A1E_t05726	-	^{19 Cys tRNA}
864861	864936	-	76	157803189	A1E_t05728	-	^{13 Val tRNA}
880175	880248	-	74	157803189	A1E_t05730	-	^{01 Gly tRNA}
880419	880504	-	86	157803189	A1E_t05732	-	^{18 Tyr tRNA}
891284	891369	+	86	157803189	A1E_t05734	-	^{15 Leu tRNA}
931317	931393	+	77	157803189	A1E_t05736	-	^{09 His tRNA}
1002145	1002221	-	77	157803189	A1E_t05738	-	^{16 Met tRNA}
1069029	1069105	+	77	157803189	A1E_t05740	-	^{03 Pro tRNA}
1103896	1103972	-	77	157803189	A1E_t05742	-	^{11 Arg tRNA}
1145637	1145723	-	87	157803189	A1E_t05744	-	^{15 Leu tRNA}
1149518	1149592	-	75	157803189	A1E_t05746	-	^{12 Thr tRNA}