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   LOCUS       NC_008061            2788459 bp    DNA     circular BCT 19-JUN-2007
   DEFINITION  Burkholderia cenocepacia AU 1054 chromosome 2, complete sequence.
   ACCESSION   NC_008061
   VERSION     NC_008061.1  GI:107025343
   KEYWORDS    .
   SOURCE      Burkholderia cenocepacia AU 1054
     ORGANISM  Burkholderia cenocepacia AU 1054
               Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales;
               Burkholderiaceae; Burkholderia; Burkholderia cepacia complex.
   REFERENCE   1  (bases 1 to 2788459)
     AUTHORS   Copeland,A., Lucas,S., Lapidus,A., Barry,K., Detter,J.C., Glavina
               del Rio,T., Hammon,N., Israni,S., Dalin,E., Tice,H., Pitluck,S.,
               Chain,P., Malfatti,S., Shin,M., Vergez,L., Schmutz,J., Larimer,F.,
               Land,M., Hauser,L., Kyrpides,N., Lykidis,A., LiPuma,J.J.,
               Konstantinidis,K., Tiedje,J.M. and Richardson,P.
     CONSRTM   US DOE Joint Genome Institute
     TITLE     Complete sequence of chromosome 2 of Burkholderia cenocepacia AU
               1054
     JOURNAL   Unpublished
   REFERENCE   2  (bases 1 to 2788459)
     CONSRTM   NCBI Genome Project
     TITLE     Direct Submission
     JOURNAL   Submitted (05-JUN-2006) National Center for Biotechnology
               Information, NIH, Bethesda, MD 20894, USA
   REFERENCE   3  (bases 1 to 2788459)
     AUTHORS   Copeland,A., Lucas,S., Lapidus,A., Barry,K., Detter,J.C., Glavina
               del Rio,T., Hammon,N., Israni,S., Dalin,E., Tice,H., Pitluck,S.,
               Chain,P., Malfatti,S., Shin,M., Vergez,L., Schmutz,J., Larimer,F.,
               Land,M., Hauser,L., Kyrpides,N., Lykidis,A., LiPuma,J.J.,
               Konstantinidis,K., Tiedje,J.M. and Richardson,P.
     CONSRTM   US DOE Joint Genome Institute
     TITLE     Direct Submission
     JOURNAL   Submitted (12-MAY-2006) US DOE Joint Genome Institute, 2800
               Mitchell Drive B100, Walnut Creek, CA 94598-1698, USA
   COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
               NCBI review. The reference sequence was derived from CP000379.
               URL -- http://www.jgi.doe.gov
               JGI Project ID: 3635680
               Source DNA and bacteria available from James M Tiedje
               (tiedjej@msu.edu)
               Contacts: James M Tiedje (tiedjej@msu.edu)
                         Paul Richardson (microbes@cuba.jgi-psf.org)
               Quality assurance done by JGI-Stanford
               Annotation done by JGI-ORNL and JGI-PGF
               Finishing done by JGI-LLNL
               Finished microbial genomes have been curated to close all gaps with
               greater than 98% coverage of at least two independent clones. Each
               base pair has a minimum q (quality) value of 30 and the total error
               rate is less than one per 50000.
               The JGI and collaborators endorse the principles for the
               distribution and use of large scale sequencing data adopted by the
               larger genome sequencing community and urge users of this data to
               follow them. it is our intention to publish the work of this
               project in a timely fashion and we welcome collaborative
               interaction on the project and analysis.
               (http://www.genome.gov/page.cfm?pageID=10506376).
               COMPLETENESS: full length.


Расположение РНК[править]

Начало Конец Направление Длина PID Ген COG Комментарий
96796 98321 + 1526 107025343 Bcen_R0071 - 16S ribosomal RNA
98385 98461 + 77 107025343 Bcen_R0072 - 14 Ile tRNA
98500 98575 + 76 107025343 Bcen_R0073 - 02 Ala tRNA
98852 101732 + 2881 107025343 Bcen_R0074 - 23S ribosomal RNA
101887 101999 + 113 107025343 Bcen_R0075 - 5S ribosomal RNA
483401 483485 - 85 107025343 Bcen_R0076 - 15 Leu tRNA
1074362 1074555 - 194 107025343 Bcen_R0077 -
1727663 1727741 - 79 107025343 Bcen_R0078 - 16 Met tRNA
1934312 1934382 + 71 107025343 Bcen_R0079 - Xaa tRNA
2033777 2033896 + 120 107025343 Bcen_R0080 -