Геном прокариот/Материалы:NC 008544

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   LOCUS       NC_008544            1055417 bp    DNA     circular BCT 05-JUL-2007
   DEFINITION  Burkholderia cenocepacia HI2424 chromosome 3, complete sequence.
   ACCESSION   NC_008544
   VERSION     NC_008544.1  GI:116686245
   KEYWORDS    .
   SOURCE      Burkholderia cenocepacia HI2424
     ORGANISM  Burkholderia cenocepacia HI2424
               Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales;
               Burkholderiaceae; Burkholderia; Burkholderia cepacia complex.
   REFERENCE   1  (bases 1 to 1055417)
     AUTHORS   Copeland,A., Lucas,S., Lapidus,A., Barry,K., Detter,J.C., Glavina
               del Rio,T., Hammon,N., Israni,S., Pitluck,S., Chain,P.,
               Malfatti,S., Shin,M., Vergez,L., Schmutz,J., Larimer,F., Land,M.,
               Hauser,L., Kyrpides,N., Kim,E., LiPuma,J.J., Gonzalez,C.F.,
               Konstantinidis,K., Tiedje,J.M. and Richardson,P.
     CONSRTM   US DOE Joint Genome Institute
     TITLE     Complete sequence of Chromosome 3 of Burkholderia cenocepacia
               HI2424
     JOURNAL   Unpublished
   REFERENCE   2  (bases 1 to 1055417)
     CONSRTM   NCBI Genome Project
     TITLE     Direct Submission
     JOURNAL   Submitted (26-OCT-2006) National Center for Biotechnology
               Information, NIH, Bethesda, MD 20894, USA
   REFERENCE   3  (bases 1 to 1055417)
     AUTHORS   Copeland,A., Lucas,S., Lapidus,A., Barry,K., Detter,J.C., Glavina
               del Rio,T., Hammon,N., Israni,S., Pitluck,S., Chain,P.,
               Malfatti,S., Shin,M., Vergez,L., Schmutz,J., Larimer,F., Land,M.,
               Hauser,L., Kyrpides,N., Kim,E., LiPuma,J.J., Gonzalez,C.F.,
               Konstantinidis,K., Tiedje,J.M. and Richardson,P.
     CONSRTM   US DOE Joint Genome Institute
     TITLE     Direct Submission
     JOURNAL   Submitted (30-AUG-2006) US DOE Joint Genome Institute, 2800
               Mitchell Drive B100, Walnut Creek, CA 94598-1698, USA
   COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
               NCBI review. The reference sequence was derived from CP000460.
               URL -- http://www.jgi.doe.gov
               JGI Project ID: 3635681
               Source DNA and bacteria available from James M. Tiedje
               (tiedjej@msu.edu)
               Contacts: James M. Tiedje (tiedjej@msu.edu)
                         Paul Richardson (microbes@cuba.jgi-psf.org)
               Quality assurance done by JGI-Stanford
               Annotation done by JGI-ORNL and JGI-PGF
               Finishing done by JGI-LLNL
               Finished microbial genomes have been curated to close all gaps with
               greater than 98% coverage of at least two independent clones. Each
               base pair has a minimum q (quality) value of 30 and the total error
               rate is less than one per 50000.
               The JGI and collaborators endorse the principles for the
               distribution and use of large scale sequencing data adopted by the
               larger genome sequencing community and urge users of this data to
               follow them. It is our intention to publish the work of this
               project in a timely fashion and we welcome collaborative
               interaction on the project and analysis.
               (http://www.genome.gov/page.cfm?pageID=10506376).
               COMPLETENESS: full length.

Расположение РНК

Начало	Конец	Направление	Длина	PID	Ген	COG	Комментарий
396193	397670	+	1478	116686245	Bcen2424_R0082	-	16S ribosomal RNA
397735	397811	+	77	116686245	Bcen2424_R0083	-	14 Ile tRNA
397850	397925	+	76	116686245	Bcen2424_R0084	-	02 Ala tRNA
398202	401082	+	2881	116686245	Bcen2424_R0085	-	23S ribosomal RNA
401237	401349	+	113	116686245	Bcen2424_R0086	-	5S ribosomal RNA