Геном прокариот/Материалы:NC 008571

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Эта статья — часть материалов: лаборатории Биоинформатика, исследовательского проекта «Геном прокариот»

   LOCUS       NC_008571            3798465 bp    DNA     circular BCT 04-APR-2007
   DEFINITION  Gramella forsetii KT0803, complete genome.
   ACCESSION   NC_008571
   VERSION     NC_008571.1  GI:120434372
   KEYWORDS    complete genome.
   SOURCE      Gramella forsetii KT0803
     ORGANISM  Gramella forsetii KT0803
               Bacteria; Bacteroidetes; Flavobacteria; Flavobacteriales;
               Flavobacteriaceae; Gramella.
   REFERENCE   1  (bases 1 to 3798465)
     AUTHORS   Bauer,M., Kube,M., Teeling,H., Richter,M., Lombardot,T., Allers,E.,
               Wurdemann,C.A., Quast,C., Kuhl,H., Knaust,F., Woebken,D.,
               Bischof,K., Mussmann,M., Choudhuri,J.V., Meyer,F., Reinhardt,R.,
               Amann,R.I. and Glockner,F.O.
     TITLE     Whole genome analysis of the marine Bacteroidetes'Gramella
               forsetii' reveals adaptations to degradation of polymeric organic
               matter
     JOURNAL   Environ. Microbiol. 8 (12), 2201-2213 (2006)
      PUBMED   17107561
   REFERENCE   2  (bases 1 to 3798465)
     CONSRTM   NCBI Genome Project
     TITLE     Direct Submission
     JOURNAL   Submitted (10-JAN-2007) National Center for Biotechnology
               Information, NIH, Bethesda, MD 20894, USA
   REFERENCE   3  (bases 1 to 3798465)
     AUTHORS   Kube,M., Bauer,M., Kuhl,H., Knaust,F., Mueller,I. and Reinhardt,R.
     TITLE     Direct Submission
     JOURNAL   Submitted (03-NOV-2006) Max Planck Institute for Molecular
               Genetics, proScience Ihnestrasse 73, D-14195 Berlin, Germany
   COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
               NCBI review. The reference sequence was derived from CU207366.
               This project was carried out by
               *Max Planck Institute for Molecular Genetics, Berlin, Germany; *Max
               Planck Institute for Marine Microbiology, Bremen, Germany;
               -------------- Genome Center
                    Center: Max Planck Institute for Molecular Genetics
                    Center code: MPIMG
               -------------- Annotation
                    Center: Max Planck Institute for Marine Microbiology
                            Celsiusstrasse 1, D-28359 Bremen, Germany.
                    Center Code: MPIMM
               --------------.
               COMPLETENESS: full length.

Расположение РНК[править]

Начало	Конец	Направление	Длина	PID	Ген	COG	Комментарий
86842	86926	-	85	120434372	GFO_0055	-	^{15 Leu tRNA}
116560	116650	+	91	120434372	GFO_0087	-	^{08 Ser tRNA}
179274	179349	+	76	120434372	GFO_0147	-	^{05 Gln tRNA}
302192	302264	+	73	120434372	GFO_0255	-	^{01 Gly tRNA}
302280	302367	+	88	120434372	GFO_0256	-	^{15 Leu tRNA}
431901	431977	+	77	120434372	GFO_0372	-	^{11 Arg tRNA}
496148	496223	+	76	120434372	GFO_0420	-	^{01 Gly tRNA}
509639	509712	+	74	120434372	GFO_0435	-	^{11 Arg tRNA}
676170	677696	+	1527	120434372	GFO_0607	-	16S ribosomal RNA
677869	677945	+	77	120434372	GFO_0608	-	^{14 Ile tRNA}
678097	678173	+	77	120434372	GFO_0609	-	^{02 Ala tRNA}
678407	681230	+	2824	120434372	GFO_0610	-	23S ribosomal RNA
681394	681502	+	109	120434372	GFO_0611	-	5S ribosomal RNA
742941	743025	+	85	120434372	GFO_0670	-	^{08 Ser tRNA}
848517	848590	+	74	120434372	GFO_0763	-	^{09 His tRNA}
905135	905212	+	78	120434372	GFO_0815	-	^{03 Pro tRNA}
929038	929114	+	77	120434372	GFO_0841	-	^{03 Pro tRNA}
1489334	1489410	-	77	120434372	GFO_1439	-	^{16 Met tRNA}
1727790	1727874	+	85	120434372	GFO_1670	-	^{08 Ser tRNA}
1728004	1728081	+	78	120434372	GFO_1671	-	^{03 Pro tRNA}
1753354	1753430	+	77	120434372	GFO_1696	-	^{11 Arg tRNA}
1988843	1988951	-	109	120434372	GFO_1895	-	5S ribosomal RNA
1989116	1991938	-	2823	120434372	GFO_1896	-	23S ribosomal RNA
1992172	1992248	-	77	120434372	GFO_1897	-	^{02 Ala tRNA}
1992400	1992476	-	77	120434372	GFO_1898	-	^{14 Ile tRNA}
1992649	1994175	-	1527	120434372	GFO_1899	-	16S ribosomal RNA
2507450	2507523	-	74	120434372	GFO_2359	-	^{12 Thr tRNA}
2526618	2526690	-	73	120434372	GFO_2377	-	^{20 Trp tRNA}
2527991	2528065	-	75	120434372	GFO_2379	-	^{12 Thr tRNA}
2528342	2528417	-	76	120434372	GFO_2381	-	^{01 Gly tRNA}
2528489	2528573	-	85	120434372	GFO_2383	-	^{18 Tyr tRNA}
2528880	2528953	-	74	120434372	GFO_2384	-	^{12 Thr tRNA}
2551392	2551467	+	76	120434372	GFO_2408	-	^{10 Lys tRNA}
2551497	2551569	+	73	120434372	GFO_2409	-	^{10 Lys tRNA}
2551737	2551821	+	85	120434372	GFO_2410	-	^{15 Leu tRNA}
2846396	2846467	-	72	120434372	GFO_2732	-	^{04 Glu tRNA}
2846536	2846610	-	75	120434372	GFO_2733	-	^{04 Glu tRNA}
3015846	3015920	-	75	120434372	GFO_2895	-	^{13 Val tRNA}
3016512	3016586	-	75	120434372	GFO_2897	-	^{13 Val tRNA}
3041212	3041320	-	109	120434372	GFO_2911	-	5S ribosomal RNA
3041485	3044307	-	2823	120434372	GFO_2912	-	23S ribosomal RNA
3044541	3044617	-	77	120434372	GFO_2913	-	^{02 Ala tRNA}
3044769	3044845	-	77	120434372	GFO_2914	-	^{14 Ile tRNA}
3045378	3046544	-	1167	120434372	GFO_2915	-	16S ribosomal RNA
3128580	3128655	+	76	120434372	GFO_2982	-	^{17 Phe tRNA}
3158482	3158557	-	76	120434372	GFO_3004	-	^{16 Met tRNA}
3182583	3182659	-	77	120434372	GFO_3024	-	^{06 Asp tRNA}
3356873	3356949	-	77	120434372	GFO_3194	-	^{07 Asn tRNA}
3471141	3471214	+	74	120434372	GFO_3310	-	^{19 Cys tRNA}
3501770	3501846	+	77	120434372	GFO_3336	-	^{16 Met tRNA}
3528821	3528897	+	77	120434372	GFO_3371	-	^{02 Ala tRNA}
3612688	3612759	+	72	120434372	GFO_3454	-	^{11 Arg tRNA}
3653965	3654046	+	82	120434372	GFO_3487	-	^{15 Leu tRNA}