Геном прокариот/Материалы:NC 002950

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Эта статья — часть материалов: лаборатории Биоинформатика, исследовательского проекта «Геном прокариот»

   LOCUS       NC_002950            2343476 bp    DNA     circular BCT 18-JAN-2006
   DEFINITION  Porphyromonas gingivalis W83, complete genome.
   ACCESSION   NC_002950
   VERSION     NC_002950.2  GI:34539880
   KEYWORDS    .
   SOURCE      Porphyromonas gingivalis W83
     ORGANISM  Porphyromonas gingivalis W83
               Bacteria; Bacteroidetes; Bacteroidetes (class); Bacteroidales;
               Porphyromonadaceae; Porphyromonas.
   REFERENCE   1  (bases 1 to 2343476)
     AUTHORS   Nelson,K., Fleishmann,R., DeBoy,R., Paulsen,I., Fouts,D., Eisen,J.,
               Daugherty,S., Dodson,R., Durkin,A., Gwinn,M., Haft,D., Kolonay,J.,
               Nelson,W., White,O., Mason,T., Tallon,L., Gray,J., Granger,D.,
               Tettelin,H., Dong,H., Galvin,J., Duncan,M., Dewhirst,F. and
               Fraser,C.
     TITLE     Complete Genome Sequence of the Oral Pathogenic Bacterium
               Porphyromonas gingivalis Strain W83
     JOURNAL   J. Bacteriol. 185 (18), 5591-5601 (2003)
      PUBMED   12949112
   REFERENCE   2  (bases 1 to 2343476)
     AUTHORS   Nelson,K., Fleishmann,R., DeBoy,R., Paulsen,I., Fouts,D., Eisen,J.,
               Daugherty,S., Dodson,R., Durkin,A., Gwinn,M., Haft,D., Kolonay,J.,
               Nelson,W., White,O., Mason,T., Tallon,L., Gray,J., Granger,D.,
               Tettelin,H., Dong,H., Galvin,J., Duncan,M., Dewhirst,F. and
               Fraser,C.
     TITLE     Direct Submission
     JOURNAL   Submitted (29-OCT-2002) The Institute for Genomic Research, 9712
               Medical Center Dr., Rockville, MD 20850, USA
   REFERENCE   3  (bases 1 to 2343476)
     AUTHORS   .
     CONSRTM   NCBI Genome Project
     TITLE     Direct Submission
     JOURNAL   Submitted (08-APR-2002) National Center for Biotechnology
               Information, NIH, Bethesda, MD 20894, USA
   COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
               NCBI review. The reference sequence was derived from AE015924.
               On Sep 9, 2003 this sequence version replaced gi:20070462.
               COMPLETENESS: full length.

Расположение РНК

Начало	Конец	Направление	Длина	PID	Ген	COG	Комментарий
6601	6677	-	77	34539880	PGt01	-	^{07 Asn tRNA}
6700	6773	-	74	34539880	PGt02	-	^{07 Asn tRNA}
35651	35724	+	74	34539880	PGt03	-	^{05 Gln tRNA}
119556	121030	+	1475	34539880	PG16SA	-	16S ribosomal RNA
121595	121668	+	74	34539880	PGt04	-	^{14 Ile tRNA}
121670	121746	+	77	34539880	PGt05	-	^{02 Ala tRNA}
121865	124698	+	2834	34539880	PG23SA	-	23S ribosomal RNA
124845	124952	+	108	34539880	PG5SA	-	5S ribosomal RNA
420529	420614	+	86	34539880	PGt06	-
420644	420715	+	72	34539880	PGt07	-	^{12 Thr tRNA}
422041	422116	+	76	34539880	PGt08	-	^{20 Trp tRNA}
563237	563323	-	87	34539880	PGt09	-	^{08 Ser tRNA}
582556	582638	+	83	34539880	PGt10	-	^{18 Tyr tRNA}
582672	582744	+	73	34539880	PGt11	-	^{01 Gly tRNA}
582761	582845	+	85	34539880	PGt12	-	^{15 Leu tRNA}
582894	582969	+	76	34539880	PGt13	-	^{01 Gly tRNA}
703739	703822	-	84	34539880	PGt14	-	^{15 Leu tRNA}
795899	795975	-	77	34539880	PGt15	-	^{11 Arg tRNA}
827300	827377	+	78	34539880	PGt16	-	^{03 Pro tRNA}
834688	834775	-	88	34539880	PGt17	-	^{08 Ser tRNA}
854671	854743	-	73	34539880	PGt18	-	^{01 Gly tRNA}
905564	905651	-	88	34539880	PGt19	-	^{08 Ser tRNA}
957036	957112	+	77	34539880	PGt20	-	^{16 Met tRNA}
977660	977736	-	77	34539880	PGt21	-	^{02 Ala tRNA}
1028024	1028108	+	85	34539880	PGt22	-	^{15 Leu tRNA}
1043983	1044058	+	76	34539880	PGt23	-	^{17 Phe tRNA}
1115027	1115103	+	77	34539880	PGt24	-	^{12 Thr tRNA}
1167157	1167230	-	74	34539880	PGt25	-	^{11 Arg tRNA}
1167266	1167339	-	74	34539880	PGt26	-	^{11 Arg tRNA}
1214224	1214296	+	73	34539880	PGt27	-	^{12 Thr tRNA}
1315403	1315476	-	74	34539880	PGt28	-	^{05 Gln tRNA}
1325681	1325755	+	75	34539880	PGt29	-	^{03 Pro tRNA}
1341463	1341570	-	108	34539880	PG5SB	-	5S ribosomal RNA
1341717	1344550	-	2834	34539880	PG23SB	-	23S ribosomal RNA
1344669	1344745	-	77	34539880	PGt30	-	^{02 Ala tRNA}
1344747	1344820	-	74	34539880	PGt31	-	^{14 Ile tRNA}
1345385	1346859	-	1475	34539880	PG16SB	-	16S ribosomal RNA
1394153	1394227	+	75	34539880	PGt32	-	^{11 Arg tRNA}
1520059	1520135	+	77	34539880	PGt33	-	^{06 Asp tRNA}
1624760	1624836	+	77	34539880	PGt34	-	^{11 Arg tRNA}
1669233	1669307	+	75	34539880	PGt35	-	^{09 His tRNA}
1752134	1752241	-	108	34539880	PG5SC	-	5S ribosomal RNA
1752388	1755221	-	2834	34539880	PG23SC	-	23S ribosomal RNA
1755340	1755416	-	77	34539880	PGt36	-	^{02 Ala tRNA}
1755418	1755491	-	74	34539880	PGt37	-	^{14 Ile tRNA}
1756056	1757530	-	1475	34539880	PG16SC	-	16S ribosomal RNA
1813108	1813179	+	72	34539880	PGt38	-	^{04 Glu tRNA}
1813528	1813599	+	72	34539880	PGt39	-	^{04 Glu tRNA}
1874227	1874301	+	75	34539880	PGt40	-	^{13 Val tRNA}
1874344	1874421	+	78	34539880	PGt41	-	^{13 Val tRNA}
1917177	1917252	-	76	34539880	PGt42	-	^{10 Lys tRNA}
2118850	2118926	-	77	34539880	PGt43	-	^{06 Asp tRNA}
2154315	2154390	-	76	34539880	PGt44	-	^{10 Lys tRNA}
2170942	2171049	-	108	34539880	PG5SD	-	5S ribosomal RNA
2171196	2174029	-	2834	34539880	PG23SD	-	23S ribosomal RNA
2174148	2174224	-	77	34539880	PGt45	-	^{02 Ala tRNA}
2174226	2174299	-	74	34539880	PGt46	-	^{14 Ile tRNA}
2174864	2176338	-	1475	34539880	PG16SD	-	16S ribosomal RNA
2213783	2213859	+	77	34539880	PGt47	-	^{16 Met tRNA}
2260655	2260730	+	76	34539880	PGt48	-	^{03 Pro tRNA}
2284950	2285024	+	75	34539880	PGt49	-	^{16 Met tRNA}
2324025	2324108	-	84	34539880	PGt50	-	^{15 Leu tRNA}
2324139	2324224	-	86	34539880	PGt51	-	^{15 Leu tRNA}
2324312	2324387	-	76	34539880	PGt52	-	^{01 Gly tRNA}
2334742	2334812	-	71	34539880	PGt53	-	^{19 Cys tRNA}