Геном прокариот/Материалы:NC 002950

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   LOCUS       NC_002950            2343476 bp    DNA     circular BCT 18-JAN-2006
   DEFINITION  Porphyromonas gingivalis W83, complete genome.
   ACCESSION   NC_002950
   VERSION     NC_002950.2  GI:34539880
   KEYWORDS    .
   SOURCE      Porphyromonas gingivalis W83
     ORGANISM  Porphyromonas gingivalis W83
               Bacteria; Bacteroidetes; Bacteroidetes (class); Bacteroidales;
               Porphyromonadaceae; Porphyromonas.
   REFERENCE   1  (bases 1 to 2343476)
     AUTHORS   Nelson,K., Fleishmann,R., DeBoy,R., Paulsen,I., Fouts,D., Eisen,J.,
               Daugherty,S., Dodson,R., Durkin,A., Gwinn,M., Haft,D., Kolonay,J.,
               Nelson,W., White,O., Mason,T., Tallon,L., Gray,J., Granger,D.,
               Tettelin,H., Dong,H., Galvin,J., Duncan,M., Dewhirst,F. and
               Fraser,C.
     TITLE     Complete Genome Sequence of the Oral Pathogenic Bacterium
               Porphyromonas gingivalis Strain W83
     JOURNAL   J. Bacteriol. 185 (18), 5591-5601 (2003)
      PUBMED   12949112
   REFERENCE   2  (bases 1 to 2343476)
     AUTHORS   Nelson,K., Fleishmann,R., DeBoy,R., Paulsen,I., Fouts,D., Eisen,J.,
               Daugherty,S., Dodson,R., Durkin,A., Gwinn,M., Haft,D., Kolonay,J.,
               Nelson,W., White,O., Mason,T., Tallon,L., Gray,J., Granger,D.,
               Tettelin,H., Dong,H., Galvin,J., Duncan,M., Dewhirst,F. and
               Fraser,C.
     TITLE     Direct Submission
     JOURNAL   Submitted (29-OCT-2002) The Institute for Genomic Research, 9712
               Medical Center Dr., Rockville, MD 20850, USA
   REFERENCE   3  (bases 1 to 2343476)
     AUTHORS   .
     CONSRTM   NCBI Genome Project
     TITLE     Direct Submission
     JOURNAL   Submitted (08-APR-2002) National Center for Biotechnology
               Information, NIH, Bethesda, MD 20894, USA
   COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
               NCBI review. The reference sequence was derived from AE015924.
               On Sep 9, 2003 this sequence version replaced gi:20070462.
               COMPLETENESS: full length.


Расположение РНК[править]

Начало Конец Направление Длина PID Ген COG Комментарий
6601 6677 - 77 34539880 PGt01 - 07 Asn tRNA
6700 6773 - 74 34539880 PGt02 - 07 Asn tRNA
35651 35724 + 74 34539880 PGt03 - 05 Gln tRNA
119556 121030 + 1475 34539880 PG16SA - 16S ribosomal RNA
121595 121668 + 74 34539880 PGt04 - 14 Ile tRNA
121670 121746 + 77 34539880 PGt05 - 02 Ala tRNA
121865 124698 + 2834 34539880 PG23SA - 23S ribosomal RNA
124845 124952 + 108 34539880 PG5SA - 5S ribosomal RNA
420529 420614 + 86 34539880 PGt06 -
420644 420715 + 72 34539880 PGt07 - 12 Thr tRNA
422041 422116 + 76 34539880 PGt08 - 20 Trp tRNA
563237 563323 - 87 34539880 PGt09 - 08 Ser tRNA
582556 582638 + 83 34539880 PGt10 - 18 Tyr tRNA
582672 582744 + 73 34539880 PGt11 - 01 Gly tRNA
582761 582845 + 85 34539880 PGt12 - 15 Leu tRNA
582894 582969 + 76 34539880 PGt13 - 01 Gly tRNA
703739 703822 - 84 34539880 PGt14 - 15 Leu tRNA
795899 795975 - 77 34539880 PGt15 - 11 Arg tRNA
827300 827377 + 78 34539880 PGt16 - 03 Pro tRNA
834688 834775 - 88 34539880 PGt17 - 08 Ser tRNA
854671 854743 - 73 34539880 PGt18 - 01 Gly tRNA
905564 905651 - 88 34539880 PGt19 - 08 Ser tRNA
957036 957112 + 77 34539880 PGt20 - 16 Met tRNA
977660 977736 - 77 34539880 PGt21 - 02 Ala tRNA
1028024 1028108 + 85 34539880 PGt22 - 15 Leu tRNA
1043983 1044058 + 76 34539880 PGt23 - 17 Phe tRNA
1115027 1115103 + 77 34539880 PGt24 - 12 Thr tRNA
1167157 1167230 - 74 34539880 PGt25 - 11 Arg tRNA
1167266 1167339 - 74 34539880 PGt26 - 11 Arg tRNA
1214224 1214296 + 73 34539880 PGt27 - 12 Thr tRNA
1315403 1315476 - 74 34539880 PGt28 - 05 Gln tRNA
1325681 1325755 + 75 34539880 PGt29 - 03 Pro tRNA
1341463 1341570 - 108 34539880 PG5SB - 5S ribosomal RNA
1341717 1344550 - 2834 34539880 PG23SB - 23S ribosomal RNA
1344669 1344745 - 77 34539880 PGt30 - 02 Ala tRNA
1344747 1344820 - 74 34539880 PGt31 - 14 Ile tRNA
1345385 1346859 - 1475 34539880 PG16SB - 16S ribosomal RNA
1394153 1394227 + 75 34539880 PGt32 - 11 Arg tRNA
1520059 1520135 + 77 34539880 PGt33 - 06 Asp tRNA
1624760 1624836 + 77 34539880 PGt34 - 11 Arg tRNA
1669233 1669307 + 75 34539880 PGt35 - 09 His tRNA
1752134 1752241 - 108 34539880 PG5SC - 5S ribosomal RNA
1752388 1755221 - 2834 34539880 PG23SC - 23S ribosomal RNA
1755340 1755416 - 77 34539880 PGt36 - 02 Ala tRNA
1755418 1755491 - 74 34539880 PGt37 - 14 Ile tRNA
1756056 1757530 - 1475 34539880 PG16SC - 16S ribosomal RNA
1813108 1813179 + 72 34539880 PGt38 - 04 Glu tRNA
1813528 1813599 + 72 34539880 PGt39 - 04 Glu tRNA
1874227 1874301 + 75 34539880 PGt40 - 13 Val tRNA
1874344 1874421 + 78 34539880 PGt41 - 13 Val tRNA
1917177 1917252 - 76 34539880 PGt42 - 10 Lys tRNA
2118850 2118926 - 77 34539880 PGt43 - 06 Asp tRNA
2154315 2154390 - 76 34539880 PGt44 - 10 Lys tRNA
2170942 2171049 - 108 34539880 PG5SD - 5S ribosomal RNA
2171196 2174029 - 2834 34539880 PG23SD - 23S ribosomal RNA
2174148 2174224 - 77 34539880 PGt45 - 02 Ala tRNA
2174226 2174299 - 74 34539880 PGt46 - 14 Ile tRNA
2174864 2176338 - 1475 34539880 PG16SD - 16S ribosomal RNA
2213783 2213859 + 77 34539880 PGt47 - 16 Met tRNA
2260655 2260730 + 76 34539880 PGt48 - 03 Pro tRNA
2284950 2285024 + 75 34539880 PGt49 - 16 Met tRNA
2324025 2324108 - 84 34539880 PGt50 - 15 Leu tRNA
2324139 2324224 - 86 34539880 PGt51 - 15 Leu tRNA
2324312 2324387 - 76 34539880 PGt52 - 01 Gly tRNA
2334742 2334812 - 71 34539880 PGt53 - 19 Cys tRNA