Геном прокариот/Материалы:NC 002973

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Эта статья — часть материалов: лаборатории Биоинформатика, исследовательского проекта «Геном прокариот»

   LOCUS       NC_002973            2905187 bp    DNA     circular BCT 31-AUG-2006
   DEFINITION  Listeria monocytogenes str. 4b F2365, complete genome.
   ACCESSION   NC_002973
   VERSION     NC_002973.6  GI:85700163
   KEYWORDS    .
   SOURCE      Listeria monocytogenes str. 4b F2365
     ORGANISM  Listeria monocytogenes str. 4b F2365
               Bacteria; Firmicutes; Bacillales; Listeriaceae; Listeria.
   REFERENCE   1  (bases 1 to 2905187)
     AUTHORS   Nelson,K.E., Fouts,D.E., Mongodin,E.F., Ravel,J., DeBoy,R.T.,
               Kolonay,J.F., Rasko,D.A., Angiuoli,S., Gill,S.R., Paulsen,I.T.,
               Peterson,J.D., White,O., Nelson,W.C., Nierman,W.C., Beanan,M.J.,
               Brinkac,L.M., Daugherty,S.C., Dodson,R.J., Durkin,A.S., Madupu,R.,
               Haft,D.H., Selengut,J., Van Aken,S., Khouri,H., Fedorova,N.,
               Forberger,H.A., Tran,B., Kathariou,S., Wonderling,L.D.,
               Uhlich,G.A., Bayles,D.O., Luchansky,J.B. and Fraser,C.M.
     TITLE     Whole genome comparisons of serotype 4b and 1/2a strains of the
               food-borne pathogen Listeria monocytogenes reveal new insights into
               the core genome components of this species
     JOURNAL   Nucleic Acids Res. 32 (8), 2386-2395 (2004)
      PUBMED   15115801
   REFERENCE   2  (bases 1 to 2905187)
     CONSRTM   NCBI Genome Project
     TITLE     Direct Submission
     JOURNAL   Submitted (11-SEP-2004) National Center for Biotechnology
               Information, NIH, Bethesda, MD 20894, USA
   REFERENCE   3  (bases 1 to 2905187)
     AUTHORS   Nelson,K.E., Fouts,D.E., Mongodin,E.F., Ravel,J., DeBoy,R.T.,
               Rasko,D.A., Kolonay,J.F., Angiuoli,S., Gill,S.R., Paulsen,I.T.,
               Peterson,J.D., White,O., Nelson,W.C., Nierman,W.C., Van Aken,S.E.,
               Khouri,H.M., Fedorova,N.B., Forberger,H.A., Tran,B. and Fraser,C.M.
     TITLE     Direct Submission
     JOURNAL   Submitted (27-FEB-2004) The Institute for Genomic Research, 9712
               Medical Center Dr, Rockville, MD 20850, USA
   COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
               NCBI review. The reference sequence was derived from AE017262.
               On Jan 24, 2006 this sequence version replaced gi:46906224.
               COMPLETENESS: full length.

Расположение РНК[править]

Начало	Конец	Направление	Длина	PID	Ген	COG	Комментарий
92983	93055	+	73	85700163	LMOf2365_tRNA-Lys-1	-	^{10 Lys tRNA}
242736	244246	+	1511	85700163	LMOf2365_16SA	-	16S ribosomal RNA
244528	247459	+	2932	85700163	LMOf2365_23SA	-	23S ribosomal RNA
247537	247652	+	116	85700163	LMOf2365_5SA	-	5S ribosomal RNA
247662	247734	+	73	85700163	LMOf2365_tRNA-Val-1	-	^{13 Val tRNA}
247743	247818	+	76	85700163	LMOf2365_tRNA-Thr-1	-	^{12 Thr tRNA}
247859	247931	+	73	85700163	LMOf2365_tRNA-Lys-2	-	^{10 Lys tRNA}
247937	248018	+	82	85700163	LMOf2365_tRNA-Leu-1	-	^{15 Leu tRNA}
248033	248104	+	72	85700163	LMOf2365_tRNA-Gly-1	-	^{01 Gly tRNA}
248126	248211	+	86	85700163	LMOf2365_tRNA-Leu-2	-	^{15 Leu tRNA}
248224	248297	+	74	85700163	LMOf2365_tRNA-Arg-1	-	^{11 Arg tRNA}
248308	248381	+	74	85700163	LMOf2365_tRNA-Pro-1	-	^{03 Pro tRNA}
248400	248475	+	76	85700163	LMOf2365_tRNA-Ala-1	-	^{02 Ala tRNA}
248755	250265	+	1511	85700163	LMOf2365_16SB	-	16S ribosomal RNA
250547	253478	+	2932	85700163	LMOf2365_23SB	-	23S ribosomal RNA
253556	253671	+	116	85700163	LMOf2365_5SB	-	5S ribosomal RNA
684053	684142	-	90	85700163	LMOf2365_tRNA-Ser-1	-	^{08 Ser tRNA}
936580	936652	+	73	85700163	LMOf2365_tRNA-Asn-1	-	^{07 Asn tRNA}
936656	936743	+	88	85700163	LMOf2365_tRNA-Ser-2	-	^{08 Ser tRNA}
940708	940779	+	72	85700163	LMOf2365_tRNA-Glu-1	-	^{04 Glu tRNA}
940806	940878	+	73	85700163	LMOf2365_tRNA-Asp-1	-	^{06 Asp tRNA}
972489	972559	+	71	85700163	LMOf2365_tRNA-Gly-2	-	^{01 Gly tRNA}
1243784	1243857	+	74	85700163	LMOf2365_tRNA-Arg-2	-	^{11 Arg tRNA}
1721829	1721900	-	72	85700163	LMOf2365_tRNA-Glu-2	-	^{04 Glu tRNA}
1721906	1721996	-	91	85700163	LMOf2365_tRNA-Ser-3	-	^{08 Ser tRNA}
1722031	1722103	-	73	85700163	LMOf2365_tRNA-Asn-2	-	^{07 Asn tRNA}
1722110	1722183	-	74	85700163	LMOf2365_tRNA-Ile-1	-	^{14 Ile tRNA}
1722209	1722279	-	71	85700163	LMOf2365_tRNA-Gly-3	-	^{01 Gly tRNA}
1722304	1722376	-	73	85700163	LMOf2365_tRNA-His-1	-	^{09 His tRNA}
1722405	1722477	-	73	85700163	LMOf2365_tRNA-Phe-1	-	^{17 Phe tRNA}
1722482	1722557	-	76	85700163	LMOf2365_tRNA-Asp-2	-	^{06 Asp tRNA}
1722562	1722635	-	74	85700163	LMOf2365_tRNA-Met-1	-	^{16 Met tRNA}
1722678	1722767	-	90	85700163	LMOf2365_tRNA-Ser-4	-	^{08 Ser tRNA}
1722790	1722863	-	74	85700163	LMOf2365_tRNA-Met-2	-	^{16 Met tRNA}
1722875	1722948	-	74	85700163	LMOf2365_tRNA-Met-3	-	^{16 Met tRNA}
1722991	1723063	-	73	85700163	LMOf2365_tRNA-Ala-2	-	^{02 Ala tRNA}
1723086	1723159	-	74	85700163	LMOf2365_tRNA-Pro-2	-	^{03 Pro tRNA}
1723170	1723243	-	74	85700163	LMOf2365_tRNA-Arg-3	-	^{11 Arg tRNA}
1723256	1723341	-	86	85700163	LMOf2365_tRNA-Leu-3	-	^{15 Leu tRNA}
1723363	1723434	-	72	85700163	LMOf2365_tRNA-Gly-4	-	^{01 Gly tRNA}
1723449	1723530	-	82	85700163	LMOf2365_tRNA-Leu-4	-	^{15 Leu tRNA}
1723536	1723608	-	73	85700163	LMOf2365_tRNA-Lys-3	-	^{10 Lys tRNA}
1723649	1723724	-	76	85700163	LMOf2365_tRNA-Thr-2	-	^{12 Thr tRNA}
1723733	1723805	-	73	85700163	LMOf2365_tRNA-Val-2	-	^{13 Val tRNA}
1723815	1723930	-	116	85700163	LMOf2365_5SC	-	5S ribosomal RNA
1724008	1726939	-	2932	85700163	LMOf2365_23SC	-	23S ribosomal RNA
1727221	1728731	-	1511	85700163	LMOf2365_16SC	-	16S ribosomal RNA
1757038	1757109	+	72	85700163	LMOf2365_tRNA-Arg-4	-	^{11 Arg tRNA}
1828492	1828607	-	116	85700163	LMOf2365_5SD	-	5S ribosomal RNA
1828685	1831616	-	2932	85700163	LMOf2365_23SD	-	23S ribosomal RNA
1831898	1833408	-	1511	85700163	LMOf2365_16SD	-	16S ribosomal RNA
1942777	1943173	-	397	85700163	LMOf2365_rnpB1	-	sRNA
2150702	2150788	+	87	85700163	LMOf2365_tRNA-Leu-5	-	^{15 Leu tRNA}
2205339	2205410	+	72	85700163	LMOf2365_tRNA-Glu-3	-	^{04 Glu tRNA}
2205568	2205641	+	74	85700163	LMOf2365_tRNA-Thr-3	-	^{12 Thr tRNA}
2205651	2205734	+	84	85700163	LMOf2365_tRNA-Tyr-1	-	^{18 Tyr tRNA}
2205746	2205820	+	75	85700163	LMOf2365_tRNA-Gln-1	-	^{05 Gln tRNA}
2205827	2205902	+	76	85700163	LMOf2365_tRNA-Lys-4	-	^{10 Lys tRNA}
2389821	2389904	-	84	85700163	LMOf2365_tRNA-Leu-6	-	^{15 Leu tRNA}
2389950	2390023	-	74	85700163	LMOf2365_tRNA-Cys-1	-	^{19 Cys tRNA}
2390043	2390114	-	72	85700163	LMOf2365_tRNA-Gly-5	-	^{01 Gly tRNA}
2390120	2390191	-	72	85700163	LMOf2365_tRNA-Gln-2	-	^{05 Gln tRNA}
2390221	2390293	-	73	85700163	LMOf2365_tRNA-His-2	-	^{09 His tRNA}
2390309	2390382	-	74	85700163	LMOf2365_tRNA-Trp-1	-	^{20 Trp tRNA}
2390390	2390473	-	84	85700163	LMOf2365_tRNA-Tyr-2	-	^{18 Tyr tRNA}
2390494	2390566	-	73	85700163	LMOf2365_tRNA-Phe-2	-	^{17 Phe tRNA}
2390571	2390646	-	76	85700163	LMOf2365_tRNA-Asp-3	-	^{06 Asp tRNA}
2390653	2390726	-	74	85700163	LMOf2365_tRNA-Met-4	-	^{16 Met tRNA}
2390748	2390823	-	76	85700163	LMOf2365_tRNA-Val-3	-	^{13 Val tRNA}
2390881	2390952	-	72	85700163	LMOf2365_tRNA-Glu-4	-	^{04 Glu tRNA}
2390986	2391074	-	89	85700163	LMOf2365_tRNA-Ser-5	-	^{08 Ser tRNA}
2391081	2391156	-	76	85700163	LMOf2365_tRNA-Asn-3	-	^{07 Asn tRNA}
2391167	2391282	-	116	85700163	LMOf2365_5SE	-	5S ribosomal RNA
2391360	2394291	-	2932	85700163	LMOf2365_23SE	-	23S ribosomal RNA
2394464	2394539	-	76	85700163	LMOf2365_tRNA-Ala-3	-	^{02 Ala tRNA}
2394586	2394659	-	74	85700163	LMOf2365_tRNA-Ile-2	-	^{14 Ile tRNA}
2394824	2396334	-	1511	85700163	LMOf2365_16SE	-	16S ribosomal RNA
2463498	2463864	-	367	85700163	LMOf2365_tmRNA1	-	tmRNA
2494999	2495070	-	72	85700163	LMOf2365_tRNA-Arg-5	-	^{11 Arg tRNA}
2621410	2621482	-	73	85700163	LMOf2365_tRNA-Thr-4	-	^{12 Thr tRNA}
2621507	2621582	-	76	85700163	LMOf2365_tRNA-Asn-4	-	^{07 Asn tRNA}
2621593	2621708	-	116	85700163	LMOf2365_5SF	-	5S ribosomal RNA
2621787	2624718	-	2932	85700163	LMOf2365_23SF	-	23S ribosomal RNA
2624891	2624966	-	76	85700163	LMOf2365_tRNA-Ala-4	-	^{02 Ala tRNA}
2625013	2625086	-	74	85700163	LMOf2365_tRNA-Ile-3	-	^{14 Ile tRNA}
2625251	2626761	-	1511	85700163	LMOf2365_16SF	-	16S ribosomal RNA
2891020	2891092	+	73	85700163	LMOf2365_tRNA-Val-4	-	^{13 Val tRNA}