Геном прокариот/Материалы:NC 002973
Внешний вид
(перенаправлено с «Материалы:NC 002973»)
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LOCUS NC_002973 2905187 bp DNA circular BCT 31-AUG-2006 DEFINITION Listeria monocytogenes str. 4b F2365, complete genome. ACCESSION NC_002973 VERSION NC_002973.6 GI:85700163 KEYWORDS . SOURCE Listeria monocytogenes str. 4b F2365 ORGANISM Listeria monocytogenes str. 4b F2365 Bacteria; Firmicutes; Bacillales; Listeriaceae; Listeria. REFERENCE 1 (bases 1 to 2905187) AUTHORS Nelson,K.E., Fouts,D.E., Mongodin,E.F., Ravel,J., DeBoy,R.T., Kolonay,J.F., Rasko,D.A., Angiuoli,S., Gill,S.R., Paulsen,I.T., Peterson,J.D., White,O., Nelson,W.C., Nierman,W.C., Beanan,M.J., Brinkac,L.M., Daugherty,S.C., Dodson,R.J., Durkin,A.S., Madupu,R., Haft,D.H., Selengut,J., Van Aken,S., Khouri,H., Fedorova,N., Forberger,H.A., Tran,B., Kathariou,S., Wonderling,L.D., Uhlich,G.A., Bayles,D.O., Luchansky,J.B. and Fraser,C.M. TITLE Whole genome comparisons of serotype 4b and 1/2a strains of the food-borne pathogen Listeria monocytogenes reveal new insights into the core genome components of this species JOURNAL Nucleic Acids Res. 32 (8), 2386-2395 (2004) PUBMED 15115801 REFERENCE 2 (bases 1 to 2905187) CONSRTM NCBI Genome Project TITLE Direct Submission JOURNAL Submitted (11-SEP-2004) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA REFERENCE 3 (bases 1 to 2905187) AUTHORS Nelson,K.E., Fouts,D.E., Mongodin,E.F., Ravel,J., DeBoy,R.T., Rasko,D.A., Kolonay,J.F., Angiuoli,S., Gill,S.R., Paulsen,I.T., Peterson,J.D., White,O., Nelson,W.C., Nierman,W.C., Van Aken,S.E., Khouri,H.M., Fedorova,N.B., Forberger,H.A., Tran,B. and Fraser,C.M. TITLE Direct Submission JOURNAL Submitted (27-FEB-2004) The Institute for Genomic Research, 9712 Medical Center Dr, Rockville, MD 20850, USA COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from AE017262. On Jan 24, 2006 this sequence version replaced gi:46906224. COMPLETENESS: full length.
Расположение РНК
[править]Начало | Конец | Направление | Длина | PID | Ген | COG | Комментарий |
---|---|---|---|---|---|---|---|
92983 | 93055 | + | 73 | 85700163 | LMOf2365_tRNA-Lys-1 | - | 10 Lys tRNA |
242736 | 244246 | + | 1511 | 85700163 | LMOf2365_16SA | - | 16S ribosomal RNA |
244528 | 247459 | + | 2932 | 85700163 | LMOf2365_23SA | - | 23S ribosomal RNA |
247537 | 247652 | + | 116 | 85700163 | LMOf2365_5SA | - | 5S ribosomal RNA |
247662 | 247734 | + | 73 | 85700163 | LMOf2365_tRNA-Val-1 | - | 13 Val tRNA |
247743 | 247818 | + | 76 | 85700163 | LMOf2365_tRNA-Thr-1 | - | 12 Thr tRNA |
247859 | 247931 | + | 73 | 85700163 | LMOf2365_tRNA-Lys-2 | - | 10 Lys tRNA |
247937 | 248018 | + | 82 | 85700163 | LMOf2365_tRNA-Leu-1 | - | 15 Leu tRNA |
248033 | 248104 | + | 72 | 85700163 | LMOf2365_tRNA-Gly-1 | - | 01 Gly tRNA |
248126 | 248211 | + | 86 | 85700163 | LMOf2365_tRNA-Leu-2 | - | 15 Leu tRNA |
248224 | 248297 | + | 74 | 85700163 | LMOf2365_tRNA-Arg-1 | - | 11 Arg tRNA |
248308 | 248381 | + | 74 | 85700163 | LMOf2365_tRNA-Pro-1 | - | 03 Pro tRNA |
248400 | 248475 | + | 76 | 85700163 | LMOf2365_tRNA-Ala-1 | - | 02 Ala tRNA |
248755 | 250265 | + | 1511 | 85700163 | LMOf2365_16SB | - | 16S ribosomal RNA |
250547 | 253478 | + | 2932 | 85700163 | LMOf2365_23SB | - | 23S ribosomal RNA |
253556 | 253671 | + | 116 | 85700163 | LMOf2365_5SB | - | 5S ribosomal RNA |
684053 | 684142 | - | 90 | 85700163 | LMOf2365_tRNA-Ser-1 | - | 08 Ser tRNA |
936580 | 936652 | + | 73 | 85700163 | LMOf2365_tRNA-Asn-1 | - | 07 Asn tRNA |
936656 | 936743 | + | 88 | 85700163 | LMOf2365_tRNA-Ser-2 | - | 08 Ser tRNA |
940708 | 940779 | + | 72 | 85700163 | LMOf2365_tRNA-Glu-1 | - | 04 Glu tRNA |
940806 | 940878 | + | 73 | 85700163 | LMOf2365_tRNA-Asp-1 | - | 06 Asp tRNA |
972489 | 972559 | + | 71 | 85700163 | LMOf2365_tRNA-Gly-2 | - | 01 Gly tRNA |
1243784 | 1243857 | + | 74 | 85700163 | LMOf2365_tRNA-Arg-2 | - | 11 Arg tRNA |
1721829 | 1721900 | - | 72 | 85700163 | LMOf2365_tRNA-Glu-2 | - | 04 Glu tRNA |
1721906 | 1721996 | - | 91 | 85700163 | LMOf2365_tRNA-Ser-3 | - | 08 Ser tRNA |
1722031 | 1722103 | - | 73 | 85700163 | LMOf2365_tRNA-Asn-2 | - | 07 Asn tRNA |
1722110 | 1722183 | - | 74 | 85700163 | LMOf2365_tRNA-Ile-1 | - | 14 Ile tRNA |
1722209 | 1722279 | - | 71 | 85700163 | LMOf2365_tRNA-Gly-3 | - | 01 Gly tRNA |
1722304 | 1722376 | - | 73 | 85700163 | LMOf2365_tRNA-His-1 | - | 09 His tRNA |
1722405 | 1722477 | - | 73 | 85700163 | LMOf2365_tRNA-Phe-1 | - | 17 Phe tRNA |
1722482 | 1722557 | - | 76 | 85700163 | LMOf2365_tRNA-Asp-2 | - | 06 Asp tRNA |
1722562 | 1722635 | - | 74 | 85700163 | LMOf2365_tRNA-Met-1 | - | 16 Met tRNA |
1722678 | 1722767 | - | 90 | 85700163 | LMOf2365_tRNA-Ser-4 | - | 08 Ser tRNA |
1722790 | 1722863 | - | 74 | 85700163 | LMOf2365_tRNA-Met-2 | - | 16 Met tRNA |
1722875 | 1722948 | - | 74 | 85700163 | LMOf2365_tRNA-Met-3 | - | 16 Met tRNA |
1722991 | 1723063 | - | 73 | 85700163 | LMOf2365_tRNA-Ala-2 | - | 02 Ala tRNA |
1723086 | 1723159 | - | 74 | 85700163 | LMOf2365_tRNA-Pro-2 | - | 03 Pro tRNA |
1723170 | 1723243 | - | 74 | 85700163 | LMOf2365_tRNA-Arg-3 | - | 11 Arg tRNA |
1723256 | 1723341 | - | 86 | 85700163 | LMOf2365_tRNA-Leu-3 | - | 15 Leu tRNA |
1723363 | 1723434 | - | 72 | 85700163 | LMOf2365_tRNA-Gly-4 | - | 01 Gly tRNA |
1723449 | 1723530 | - | 82 | 85700163 | LMOf2365_tRNA-Leu-4 | - | 15 Leu tRNA |
1723536 | 1723608 | - | 73 | 85700163 | LMOf2365_tRNA-Lys-3 | - | 10 Lys tRNA |
1723649 | 1723724 | - | 76 | 85700163 | LMOf2365_tRNA-Thr-2 | - | 12 Thr tRNA |
1723733 | 1723805 | - | 73 | 85700163 | LMOf2365_tRNA-Val-2 | - | 13 Val tRNA |
1723815 | 1723930 | - | 116 | 85700163 | LMOf2365_5SC | - | 5S ribosomal RNA |
1724008 | 1726939 | - | 2932 | 85700163 | LMOf2365_23SC | - | 23S ribosomal RNA |
1727221 | 1728731 | - | 1511 | 85700163 | LMOf2365_16SC | - | 16S ribosomal RNA |
1757038 | 1757109 | + | 72 | 85700163 | LMOf2365_tRNA-Arg-4 | - | 11 Arg tRNA |
1828492 | 1828607 | - | 116 | 85700163 | LMOf2365_5SD | - | 5S ribosomal RNA |
1828685 | 1831616 | - | 2932 | 85700163 | LMOf2365_23SD | - | 23S ribosomal RNA |
1831898 | 1833408 | - | 1511 | 85700163 | LMOf2365_16SD | - | 16S ribosomal RNA |
1942777 | 1943173 | - | 397 | 85700163 | LMOf2365_rnpB1 | - | sRNA |
2150702 | 2150788 | + | 87 | 85700163 | LMOf2365_tRNA-Leu-5 | - | 15 Leu tRNA |
2205339 | 2205410 | + | 72 | 85700163 | LMOf2365_tRNA-Glu-3 | - | 04 Glu tRNA |
2205568 | 2205641 | + | 74 | 85700163 | LMOf2365_tRNA-Thr-3 | - | 12 Thr tRNA |
2205651 | 2205734 | + | 84 | 85700163 | LMOf2365_tRNA-Tyr-1 | - | 18 Tyr tRNA |
2205746 | 2205820 | + | 75 | 85700163 | LMOf2365_tRNA-Gln-1 | - | 05 Gln tRNA |
2205827 | 2205902 | + | 76 | 85700163 | LMOf2365_tRNA-Lys-4 | - | 10 Lys tRNA |
2389821 | 2389904 | - | 84 | 85700163 | LMOf2365_tRNA-Leu-6 | - | 15 Leu tRNA |
2389950 | 2390023 | - | 74 | 85700163 | LMOf2365_tRNA-Cys-1 | - | 19 Cys tRNA |
2390043 | 2390114 | - | 72 | 85700163 | LMOf2365_tRNA-Gly-5 | - | 01 Gly tRNA |
2390120 | 2390191 | - | 72 | 85700163 | LMOf2365_tRNA-Gln-2 | - | 05 Gln tRNA |
2390221 | 2390293 | - | 73 | 85700163 | LMOf2365_tRNA-His-2 | - | 09 His tRNA |
2390309 | 2390382 | - | 74 | 85700163 | LMOf2365_tRNA-Trp-1 | - | 20 Trp tRNA |
2390390 | 2390473 | - | 84 | 85700163 | LMOf2365_tRNA-Tyr-2 | - | 18 Tyr tRNA |
2390494 | 2390566 | - | 73 | 85700163 | LMOf2365_tRNA-Phe-2 | - | 17 Phe tRNA |
2390571 | 2390646 | - | 76 | 85700163 | LMOf2365_tRNA-Asp-3 | - | 06 Asp tRNA |
2390653 | 2390726 | - | 74 | 85700163 | LMOf2365_tRNA-Met-4 | - | 16 Met tRNA |
2390748 | 2390823 | - | 76 | 85700163 | LMOf2365_tRNA-Val-3 | - | 13 Val tRNA |
2390881 | 2390952 | - | 72 | 85700163 | LMOf2365_tRNA-Glu-4 | - | 04 Glu tRNA |
2390986 | 2391074 | - | 89 | 85700163 | LMOf2365_tRNA-Ser-5 | - | 08 Ser tRNA |
2391081 | 2391156 | - | 76 | 85700163 | LMOf2365_tRNA-Asn-3 | - | 07 Asn tRNA |
2391167 | 2391282 | - | 116 | 85700163 | LMOf2365_5SE | - | 5S ribosomal RNA |
2391360 | 2394291 | - | 2932 | 85700163 | LMOf2365_23SE | - | 23S ribosomal RNA |
2394464 | 2394539 | - | 76 | 85700163 | LMOf2365_tRNA-Ala-3 | - | 02 Ala tRNA |
2394586 | 2394659 | - | 74 | 85700163 | LMOf2365_tRNA-Ile-2 | - | 14 Ile tRNA |
2394824 | 2396334 | - | 1511 | 85700163 | LMOf2365_16SE | - | 16S ribosomal RNA |
2463498 | 2463864 | - | 367 | 85700163 | LMOf2365_tmRNA1 | - | tmRNA |
2494999 | 2495070 | - | 72 | 85700163 | LMOf2365_tRNA-Arg-5 | - | 11 Arg tRNA |
2621410 | 2621482 | - | 73 | 85700163 | LMOf2365_tRNA-Thr-4 | - | 12 Thr tRNA |
2621507 | 2621582 | - | 76 | 85700163 | LMOf2365_tRNA-Asn-4 | - | 07 Asn tRNA |
2621593 | 2621708 | - | 116 | 85700163 | LMOf2365_5SF | - | 5S ribosomal RNA |
2621787 | 2624718 | - | 2932 | 85700163 | LMOf2365_23SF | - | 23S ribosomal RNA |
2624891 | 2624966 | - | 76 | 85700163 | LMOf2365_tRNA-Ala-4 | - | 02 Ala tRNA |
2625013 | 2625086 | - | 74 | 85700163 | LMOf2365_tRNA-Ile-3 | - | 14 Ile tRNA |
2625251 | 2626761 | - | 1511 | 85700163 | LMOf2365_16SF | - | 16S ribosomal RNA |
2891020 | 2891092 | + | 73 | 85700163 | LMOf2365_tRNA-Val-4 | - | 13 Val tRNA |