Перейти к содержанию

Геном прокариот/Материалы:NC 002973

Материал из Викиверситета
(перенаправлено с «Материалы:NC 002973»)
Базовый уровень статей

Выделить только проверенную информацию

Создать черновик

   LOCUS       NC_002973            2905187 bp    DNA     circular BCT 31-AUG-2006
   DEFINITION  Listeria monocytogenes str. 4b F2365, complete genome.
   ACCESSION   NC_002973
   VERSION     NC_002973.6  GI:85700163
   KEYWORDS    .
   SOURCE      Listeria monocytogenes str. 4b F2365
     ORGANISM  Listeria monocytogenes str. 4b F2365
               Bacteria; Firmicutes; Bacillales; Listeriaceae; Listeria.
   REFERENCE   1  (bases 1 to 2905187)
     AUTHORS   Nelson,K.E., Fouts,D.E., Mongodin,E.F., Ravel,J., DeBoy,R.T.,
               Kolonay,J.F., Rasko,D.A., Angiuoli,S., Gill,S.R., Paulsen,I.T.,
               Peterson,J.D., White,O., Nelson,W.C., Nierman,W.C., Beanan,M.J.,
               Brinkac,L.M., Daugherty,S.C., Dodson,R.J., Durkin,A.S., Madupu,R.,
               Haft,D.H., Selengut,J., Van Aken,S., Khouri,H., Fedorova,N.,
               Forberger,H.A., Tran,B., Kathariou,S., Wonderling,L.D.,
               Uhlich,G.A., Bayles,D.O., Luchansky,J.B. and Fraser,C.M.
     TITLE     Whole genome comparisons of serotype 4b and 1/2a strains of the
               food-borne pathogen Listeria monocytogenes reveal new insights into
               the core genome components of this species
     JOURNAL   Nucleic Acids Res. 32 (8), 2386-2395 (2004)
      PUBMED   15115801
   REFERENCE   2  (bases 1 to 2905187)
     CONSRTM   NCBI Genome Project
     TITLE     Direct Submission
     JOURNAL   Submitted (11-SEP-2004) National Center for Biotechnology
               Information, NIH, Bethesda, MD 20894, USA
   REFERENCE   3  (bases 1 to 2905187)
     AUTHORS   Nelson,K.E., Fouts,D.E., Mongodin,E.F., Ravel,J., DeBoy,R.T.,
               Rasko,D.A., Kolonay,J.F., Angiuoli,S., Gill,S.R., Paulsen,I.T.,
               Peterson,J.D., White,O., Nelson,W.C., Nierman,W.C., Van Aken,S.E.,
               Khouri,H.M., Fedorova,N.B., Forberger,H.A., Tran,B. and Fraser,C.M.
     TITLE     Direct Submission
     JOURNAL   Submitted (27-FEB-2004) The Institute for Genomic Research, 9712
               Medical Center Dr, Rockville, MD 20850, USA
   COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
               NCBI review. The reference sequence was derived from AE017262.
               On Jan 24, 2006 this sequence version replaced gi:46906224.
               COMPLETENESS: full length.


Расположение РНК

[править]
Начало Конец Направление Длина PID Ген COG Комментарий
92983 93055 + 73 85700163 LMOf2365_tRNA-Lys-1 - 10 Lys tRNA
242736 244246 + 1511 85700163 LMOf2365_16SA - 16S ribosomal RNA
244528 247459 + 2932 85700163 LMOf2365_23SA - 23S ribosomal RNA
247537 247652 + 116 85700163 LMOf2365_5SA - 5S ribosomal RNA
247662 247734 + 73 85700163 LMOf2365_tRNA-Val-1 - 13 Val tRNA
247743 247818 + 76 85700163 LMOf2365_tRNA-Thr-1 - 12 Thr tRNA
247859 247931 + 73 85700163 LMOf2365_tRNA-Lys-2 - 10 Lys tRNA
247937 248018 + 82 85700163 LMOf2365_tRNA-Leu-1 - 15 Leu tRNA
248033 248104 + 72 85700163 LMOf2365_tRNA-Gly-1 - 01 Gly tRNA
248126 248211 + 86 85700163 LMOf2365_tRNA-Leu-2 - 15 Leu tRNA
248224 248297 + 74 85700163 LMOf2365_tRNA-Arg-1 - 11 Arg tRNA
248308 248381 + 74 85700163 LMOf2365_tRNA-Pro-1 - 03 Pro tRNA
248400 248475 + 76 85700163 LMOf2365_tRNA-Ala-1 - 02 Ala tRNA
248755 250265 + 1511 85700163 LMOf2365_16SB - 16S ribosomal RNA
250547 253478 + 2932 85700163 LMOf2365_23SB - 23S ribosomal RNA
253556 253671 + 116 85700163 LMOf2365_5SB - 5S ribosomal RNA
684053 684142 - 90 85700163 LMOf2365_tRNA-Ser-1 - 08 Ser tRNA
936580 936652 + 73 85700163 LMOf2365_tRNA-Asn-1 - 07 Asn tRNA
936656 936743 + 88 85700163 LMOf2365_tRNA-Ser-2 - 08 Ser tRNA
940708 940779 + 72 85700163 LMOf2365_tRNA-Glu-1 - 04 Glu tRNA
940806 940878 + 73 85700163 LMOf2365_tRNA-Asp-1 - 06 Asp tRNA
972489 972559 + 71 85700163 LMOf2365_tRNA-Gly-2 - 01 Gly tRNA
1243784 1243857 + 74 85700163 LMOf2365_tRNA-Arg-2 - 11 Arg tRNA
1721829 1721900 - 72 85700163 LMOf2365_tRNA-Glu-2 - 04 Glu tRNA
1721906 1721996 - 91 85700163 LMOf2365_tRNA-Ser-3 - 08 Ser tRNA
1722031 1722103 - 73 85700163 LMOf2365_tRNA-Asn-2 - 07 Asn tRNA
1722110 1722183 - 74 85700163 LMOf2365_tRNA-Ile-1 - 14 Ile tRNA
1722209 1722279 - 71 85700163 LMOf2365_tRNA-Gly-3 - 01 Gly tRNA
1722304 1722376 - 73 85700163 LMOf2365_tRNA-His-1 - 09 His tRNA
1722405 1722477 - 73 85700163 LMOf2365_tRNA-Phe-1 - 17 Phe tRNA
1722482 1722557 - 76 85700163 LMOf2365_tRNA-Asp-2 - 06 Asp tRNA
1722562 1722635 - 74 85700163 LMOf2365_tRNA-Met-1 - 16 Met tRNA
1722678 1722767 - 90 85700163 LMOf2365_tRNA-Ser-4 - 08 Ser tRNA
1722790 1722863 - 74 85700163 LMOf2365_tRNA-Met-2 - 16 Met tRNA
1722875 1722948 - 74 85700163 LMOf2365_tRNA-Met-3 - 16 Met tRNA
1722991 1723063 - 73 85700163 LMOf2365_tRNA-Ala-2 - 02 Ala tRNA
1723086 1723159 - 74 85700163 LMOf2365_tRNA-Pro-2 - 03 Pro tRNA
1723170 1723243 - 74 85700163 LMOf2365_tRNA-Arg-3 - 11 Arg tRNA
1723256 1723341 - 86 85700163 LMOf2365_tRNA-Leu-3 - 15 Leu tRNA
1723363 1723434 - 72 85700163 LMOf2365_tRNA-Gly-4 - 01 Gly tRNA
1723449 1723530 - 82 85700163 LMOf2365_tRNA-Leu-4 - 15 Leu tRNA
1723536 1723608 - 73 85700163 LMOf2365_tRNA-Lys-3 - 10 Lys tRNA
1723649 1723724 - 76 85700163 LMOf2365_tRNA-Thr-2 - 12 Thr tRNA
1723733 1723805 - 73 85700163 LMOf2365_tRNA-Val-2 - 13 Val tRNA
1723815 1723930 - 116 85700163 LMOf2365_5SC - 5S ribosomal RNA
1724008 1726939 - 2932 85700163 LMOf2365_23SC - 23S ribosomal RNA
1727221 1728731 - 1511 85700163 LMOf2365_16SC - 16S ribosomal RNA
1757038 1757109 + 72 85700163 LMOf2365_tRNA-Arg-4 - 11 Arg tRNA
1828492 1828607 - 116 85700163 LMOf2365_5SD - 5S ribosomal RNA
1828685 1831616 - 2932 85700163 LMOf2365_23SD - 23S ribosomal RNA
1831898 1833408 - 1511 85700163 LMOf2365_16SD - 16S ribosomal RNA
1942777 1943173 - 397 85700163 LMOf2365_rnpB1 - sRNA
2150702 2150788 + 87 85700163 LMOf2365_tRNA-Leu-5 - 15 Leu tRNA
2205339 2205410 + 72 85700163 LMOf2365_tRNA-Glu-3 - 04 Glu tRNA
2205568 2205641 + 74 85700163 LMOf2365_tRNA-Thr-3 - 12 Thr tRNA
2205651 2205734 + 84 85700163 LMOf2365_tRNA-Tyr-1 - 18 Tyr tRNA
2205746 2205820 + 75 85700163 LMOf2365_tRNA-Gln-1 - 05 Gln tRNA
2205827 2205902 + 76 85700163 LMOf2365_tRNA-Lys-4 - 10 Lys tRNA
2389821 2389904 - 84 85700163 LMOf2365_tRNA-Leu-6 - 15 Leu tRNA
2389950 2390023 - 74 85700163 LMOf2365_tRNA-Cys-1 - 19 Cys tRNA
2390043 2390114 - 72 85700163 LMOf2365_tRNA-Gly-5 - 01 Gly tRNA
2390120 2390191 - 72 85700163 LMOf2365_tRNA-Gln-2 - 05 Gln tRNA
2390221 2390293 - 73 85700163 LMOf2365_tRNA-His-2 - 09 His tRNA
2390309 2390382 - 74 85700163 LMOf2365_tRNA-Trp-1 - 20 Trp tRNA
2390390 2390473 - 84 85700163 LMOf2365_tRNA-Tyr-2 - 18 Tyr tRNA
2390494 2390566 - 73 85700163 LMOf2365_tRNA-Phe-2 - 17 Phe tRNA
2390571 2390646 - 76 85700163 LMOf2365_tRNA-Asp-3 - 06 Asp tRNA
2390653 2390726 - 74 85700163 LMOf2365_tRNA-Met-4 - 16 Met tRNA
2390748 2390823 - 76 85700163 LMOf2365_tRNA-Val-3 - 13 Val tRNA
2390881 2390952 - 72 85700163 LMOf2365_tRNA-Glu-4 - 04 Glu tRNA
2390986 2391074 - 89 85700163 LMOf2365_tRNA-Ser-5 - 08 Ser tRNA
2391081 2391156 - 76 85700163 LMOf2365_tRNA-Asn-3 - 07 Asn tRNA
2391167 2391282 - 116 85700163 LMOf2365_5SE - 5S ribosomal RNA
2391360 2394291 - 2932 85700163 LMOf2365_23SE - 23S ribosomal RNA
2394464 2394539 - 76 85700163 LMOf2365_tRNA-Ala-3 - 02 Ala tRNA
2394586 2394659 - 74 85700163 LMOf2365_tRNA-Ile-2 - 14 Ile tRNA
2394824 2396334 - 1511 85700163 LMOf2365_16SE - 16S ribosomal RNA
2463498 2463864 - 367 85700163 LMOf2365_tmRNA1 - tmRNA
2494999 2495070 - 72 85700163 LMOf2365_tRNA-Arg-5 - 11 Arg tRNA
2621410 2621482 - 73 85700163 LMOf2365_tRNA-Thr-4 - 12 Thr tRNA
2621507 2621582 - 76 85700163 LMOf2365_tRNA-Asn-4 - 07 Asn tRNA
2621593 2621708 - 116 85700163 LMOf2365_5SF - 5S ribosomal RNA
2621787 2624718 - 2932 85700163 LMOf2365_23SF - 23S ribosomal RNA
2624891 2624966 - 76 85700163 LMOf2365_tRNA-Ala-4 - 02 Ala tRNA
2625013 2625086 - 74 85700163 LMOf2365_tRNA-Ile-3 - 14 Ile tRNA
2625251 2626761 - 1511 85700163 LMOf2365_16SF - 16S ribosomal RNA
2891020 2891092 + 73 85700163 LMOf2365_tRNA-Val-4 - 13 Val tRNA