Геном прокариот/Материалы:NC 003450

	Базовый уровень статей Выделить только проверенную информацию
	Создать черновик

Эта статья — часть материалов: лаборатории Биоинформатика, исследовательского проекта «Геном прокариот»

   LOCUS       NC_003450            3309401 bp    DNA     circular BCT 14-DEC-2006
   DEFINITION  Corynebacterium glutamicum ATCC 13032, complete genome.
   ACCESSION   NC_003450
   VERSION     NC_003450.3  GI:58036263
   KEYWORDS    .
   SOURCE      Corynebacterium glutamicum ATCC 13032
     ORGANISM  Corynebacterium glutamicum ATCC 13032
               Bacteria; Actinobacteria; Actinobacteridae; Actinomycetales;
               Corynebacterineae; Corynebacteriaceae; Corynebacterium.
   REFERENCE   1  (bases 1 to 3309401)
     AUTHORS   Nakagawa,S.
     TITLE     The complete genome sequencing of Corynebacterium glutamicum ATCC
               13032
     JOURNAL   (in) PROCEEDINGS OF THE 9TH INTERNATIONAL SYMPOSIUM ON THE GENETICS
               OF INDUSTRIAL MICROORGANISMS:21;
               (?)
   REFERENCE   2  (bases 1 to 3309401)
     AUTHORS   Ikeda,M. and Nakagawa,S.
     TITLE     The Corynebacterium glutamicum genome: features and impacts on
               biotechnological processes
     JOURNAL   Appl. Microbiol. Biotechnol. 62 (2-3), 99-109 (2003)
      PUBMED   12743753
   REFERENCE   3  (bases 1 to 3309401)
     AUTHORS   NCBI Genomes Project.
     TITLE     Direct Submission
     JOURNAL   Submitted (23-SEP-2002) National Center for Biotechnology
               Information, NIH, Bethesda, MD 20894, USA
   REFERENCE   4  (bases 1 to 3309401)
     AUTHORS   Nakagawa,S.
     TITLE     Direct Submission
     JOURNAL   Submitted (24-MAY-2002) Tokyo Research Laboratories, Kogyo Co.
               Ltd., 3-6-6 Asahi-machi, Machida, Tokyo 194-8533, Japan
   REFERENCE   5  (bases 1 to 3309401)
     CONSRTM   NCBI Genome Project
     TITLE     Direct Submission
     JOURNAL   Submitted (20-MAR-2002) National Center for Biotechnology
               Information, NIH, Bethesda, MD 20894, USA
   COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
               NCBI review. The reference sequence was derived from BA000036.
               On Jan 21, 2005 this sequence version replaced gi:23308765.
               Genome re-annotation resulted from the combination of the
               Corynebacterium glutamicum complete genomes deposited in GenBank
               Accession Numbers BA000036 and NC_003450. First version of
               NC_003450 was annotated by NCBI staff using  the GenMark HMM
               prediction program and BLAST analysis results. Cgl#### systematic
               gene names were used but the same gene names were later re-used in
               BA000036 record.  To avoid the confusion in the the present record
               NCgl#### refers to  the new systematic gene name for the revised
               version of the Corynebacterium glutamicum genome, whereas, Cgl####
               refers to the corresponding gene in the Corynebacterium glutamicum
               complete genome deposited at GenBank Accession Number BA000036.
               COMPLETENESS: full length.

Расположение РНК[править]

Начало	Конец	Направление	Длина	PID	Ген	COG	Комментарий
14851	14927	+	77	58036263	NCg1t01	-	^{14 Ile tRNA}
14939	15011	+	73	58036263	NCg1t02	-	^{02 Ala tRNA}
23500	23572	+	73	58036263	NCg1t03	-	^{02 Ala tRNA}
23903	23979	+	77	58036263	NCg1t04	-	^{14 Ile tRNA}
23991	24063	+	73	58036263	NCg1t05	-	^{02 Ala tRNA}
49705	49791	+	87	58036263	NCg1t06	-	^{15 Leu tRNA}
76643	78166	+	1524	58036263	NCg1r01	-	16S ribosomal RNA
78555	81641	+	3087	58036263	NCg1r02	-	23S ribosomal RNA
81754	81873	+	120	58036263	NCg1r03	-	5S ribosomal RNA
221750	221837	+	88	58036263	NCg1t07	-	^{08 Ser tRNA}
233409	233497	+	89	58036263	NCg1t08	-	^{08 Ser tRNA}
233527	233602	+	76	58036263	NCg1t09	-	^{11 Arg tRNA}
241637	241709	+	73	58036263	NCg1t10	-	^{11 Arg tRNA}
244294	244384	+	91	58036263	NCg1t11	-	^{08 Ser tRNA}
256222	256309	-	88	58036263	NCg1t12	-	^{08 Ser tRNA}
292466	292542	-	77	58036263	NCg1t13	-	^{03 Pro tRNA}
329629	329704	+	76	58036263	NCg1t14	-	^{12 Thr tRNA}
495199	495284	+	86	58036263	NCg1t15	-	^{18 Tyr tRNA}
495904	495976	+	73	58036263	NCg1t16	-	^{12 Thr tRNA}
496229	496301	+	73	58036263	NCg1t17	-	^{12 Thr tRNA}
496340	496414	+	75	58036263	NCg1t18	-	^{16 Met tRNA}
496508	496583	+	76	58036263	NCg1t19	-	^{20 Trp tRNA}
832667	832743	+	77	58036263	NCg1t20	-	^{16 Met tRNA}
847074	847449	+	376	58036263	NcG10s01	-	10Sa RNA (tmRNA)
848352	848428	+	77	58036263	NCg1t21	-	^{16 Met tRNA}
856119	857643	+	1525	58036263	NCg1r04	-	16S ribosomal RNA
858034	861112	+	3079	58036263	NCg1r05	-	23S ribosomal RNA
861223	861342	+	120	58036263	NCg1r07	-	5S ribosomal RNA
897227	897302	-	76	58036263	NCg1t22	-	^{11 Arg tRNA}
1018251	1018325	-	75	58036263	NCg1t23	-	^{05 Gln tRNA}
1038513	1038589	+	77	58036263	NCg1t24	-	^{15 Leu tRNA}
1236396	1236468	-	73	58036263	NCg1t25	-	^{11 Arg tRNA}
1365593	1365664	+	72	58036263	NCg1t26	-	^{05 Gln tRNA}
1365703	1365775	+	73	58036263	NCg1t27	-	^{04 Glu tRNA}
1365842	1365913	+	72	58036263	NCg1t28	-	^{05 Gln tRNA}
1365951	1366023	+	73	58036263	NCg1t29	-	^{04 Glu tRNA}
1367573	1367648	+	76	58036263	NCg1t30	-	^{04 Glu tRNA}
1413565	1413641	-	77	58036263	NCg1t31	-	^{15 Leu tRNA}
1479364	1480887	+	1524	58036263	NCg1r08	-	16S ribosomal RNA
1481278	1484363	+	3086	58036263	NCg1r09	-	23S ribosomal RNA
1484476	1484595	+	120	58036263	NCg1r10	-	5S ribosomal RNA
1515223	1515299	-	77	58036263	NCg1t32	-	^{03 Pro tRNA}
1609422	1609507	+	86	58036263	NCg1t33	-	^{15 Leu tRNA}
1609594	1609682	+	89	58036263	NCg1t34	-	^{15 Leu tRNA}
1775673	1775748	-	76	58036263	NCg1t35	-	^{01 Gly tRNA}
1775782	1775856	-	75	58036263	NCg1t36	-	^{13 Val tRNA}
1775867	1775937	-	71	58036263	NCg1t37	-	^{19 Cys tRNA}
1775979	1776051	-	73	58036263	NCg1t38	-	^{01 Gly tRNA}
1776085	1776159	-	75	58036263	NCg1t39	-	^{13 Val tRNA}
1776193	1776265	-	73	58036263	NCg1t40	-	^{01 Gly tRNA}
1776613	1776684	+	72	58036263	NCg1t41	-	^{13 Val tRNA}
2370920	2371315	-	396	58036263	NcG10s02	-	Rnase P, RNA component
2378693	2378768	-	76	58036263	NCg1t42	-	^{13 Val tRNA}
2394989	2395065	-	77	58036263	NCg1t43	-	^{16 Met tRNA}
2396847	2396922	+	76	58036263	NCg1t44	-	^{07 Asn tRNA}
2397058	2397133	+	76	58036263	NCg1t45	-	^{07 Asn tRNA}
2558223	2558296	-	74	58036263	NCg1t46	-	^{03 Pro tRNA}
2560605	2560679	-	75	58036263	NCg1t47	-	^{01 Gly tRNA}
2601021	2601097	+	77	58036263	NCg1t48	-	^{11 Arg tRNA}
2602958	2603033	+	76	58036263	NCg1t49	-	^{09 His tRNA}
2622648	2622723	+	76	58036263	NCg1t50	-	^{10 Lys tRNA}
2622811	2622883	+	73	58036263	NCg1t51	-	^{10 Lys tRNA}
2650244	2650328	-	85	58036263	NCg1t52	-	^{15 Leu tRNA}
2687225	2687300	-	76	58036263	NCg1t53	-	^{02 Ala tRNA}
2703712	2703831	-	120	58036263	NCg1r11	-	5S ribosomal RNA
2703948	2707034	-	3087	58036263	NCg1r12	-	23S ribosomal RNA
2707425	2708948	-	1524	58036263	NCg1r13	-	16S ribosomal RNA
2712579	2712698	-	120	58036263	NCg1r14	-	5S ribosomal RNA
2712815	2715901	-	3087	58036263	NCg1r15	-	23S ribosomal RNA
2716292	2717815	-	1524	58036263	NCg1r16	-	16S ribosomal RNA
2724174	2724249	-	76	58036263	NCg1t54	-	^{17 Phe tRNA}
2724282	2724355	-	74	58036263	NCg1t55	-	^{06 Asp tRNA}
2727078	2727151	-	74	58036263	NCg1t56	-	^{06 Asp tRNA}
2727190	2727265	-	76	58036263	NCg1t57	-	^{04 Glu tRNA}
2729135	2729207	-	73	58036263	NCg1t58	-	^{10 Lys tRNA}
2790759	2790834	-	76	58036263	NCg1t59	-	^{12 Thr tRNA}
3037551	3037624	+	74	58036263	NCg1t60	-	^{01 Gly tRNA}
3145971	3146090	-	120	58036263	NCg1r17	-	5S ribosomal RNA
3146203	3149288	-	3086	58036263	NCg1r18	-	23S ribosomal RNA
3149679	3151202	-	1524	58036263	NCg1r19	-	16S ribosomal RNA