Геном прокариот/Материалы:NC 004350

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Эта статья — часть материалов: лаборатории Биоинформатика, исследовательского проекта «Геном прокариот»

   LOCUS       NC_004350            2030921 bp    DNA     circular BCT 04-APR-2006
   DEFINITION  Streptococcus mutans UA159, complete genome.
   ACCESSION   NC_004350
   VERSION     NC_004350.1  GI:24378532
   KEYWORDS    .
   SOURCE      Streptococcus mutans UA159
     ORGANISM  Streptococcus mutans UA159
               Bacteria; Firmicutes; Lactobacillales; Streptococcaceae;
               Streptococcus.
   REFERENCE   1  (bases 1 to 2030921)
     AUTHORS   Ajdic,D., McShan,W.M., McLaughlin,R.E., Savic,G., Chang,J.,
               Carson,M.B., Primeaux,C., Tian,R., Kenton,S., Jia,H., Lin,S.,
               Qian,Y., Li,S., Zhu,H., Najar,F., Lai,H., White,J., Roe,B.A. and
               Ferretti,J.J.
     TITLE     Genome sequence of Streptococcus mutans UA159, a cariogenic dental
               pathogen
     JOURNAL   Proc. Natl. Acad. Sci. U.S.A. 99 (22), 14434-14439 (2002)
      PUBMED   12397186
   REFERENCE   2  (bases 1 to 2030921)
     AUTHORS   .
     CONSRTM   NCBI Genome Project
     TITLE     Direct Submission
     JOURNAL   Submitted (10-SEP-2004) National Center for Biotechnology
               Information, NIH, Bethesda, MD 20894, USA
   REFERENCE   3  (bases 1 to 2030921)
     AUTHORS   Ajdic,D., McShan,W.M., McLaughlin,R.E., Savic,G., Chang,J.,
               Carson,M.B., Primeaux,C., Tian,R., Kenton,S., Jia,H., Lin,S.,
               Qian,Y., Li,S., Zhu,H., Najar,F., Lai,H., White,J., Roe,B.A. and
               Ferretti,J.J.
     TITLE     Direct Submission
     JOURNAL   Submitted (09-JUL-2002) Department of Microbiology and Immunology,
               University of Oklahoma Health Sciences Center, 940 SL Young Blvd.,
               Oklahoma City, OK 73104, USA
   COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
               NCBI review. The reference sequence was derived from AE014133.
               COMPLETENESS: full length.

Расположение РНК

Начало	Конец	Направление	Длина	PID	Ген	COG	Комментарий
16877	18428	+	1552	24378532	SMUr01	-	16S ribosomal RNA
18486	18558	+	73	24378532	SMUt01	-	^{02 Ala tRNA}
18817	21717	+	2901	24378532	SMUr02	-	23S ribosomal RNA
21898	22017	+	120	24378532	SMUr03	-	5S ribosomal RNA
22018	22090	+	73	24378532	SMUt02	-	^{13 Val tRNA}
22120	22192	+	73	24378532	SMUt03	-	^{06 Asp tRNA}
22220	22295	+	76	24378532	SMUt04	-	^{10 Lys tRNA}
22302	22383	+	82	24378532	SMUt05	-	^{15 Leu tRNA}
22398	22470	+	73	24378532	SMUt06	-	^{12 Thr tRNA}
22473	22544	+	72	24378532	SMUt07	-	^{01 Gly tRNA}
22552	22637	+	86	24378532	SMUt08	-	^{15 Leu tRNA}
22651	22724	+	74	24378532	SMUt09	-	^{11 Arg tRNA}
22778	22851	+	74	24378532	SMUt10	-	^{03 Pro tRNA}
22857	22930	+	74	24378532	SMUt11	-	^{16 Met tRNA}
22954	23027	+	74	24378532	SMUt12	-	^{16 Met tRNA}
23042	23131	+	90	24378532	SMUt13	-	^{08 Ser tRNA}
23144	23217	+	74	24378532	SMUt14	-	^{16 Met tRNA}
23227	23299	+	73	24378532	SMUt15	-	^{17 Phe tRNA}
23306	23376	+	71	24378532	SMUt16	-	^{01 Gly tRNA}
23411	23484	+	74	24378532	SMUt17	-	^{14 Ile tRNA}
23494	23581	+	88	24378532	SMUt18	-	^{08 Ser tRNA}
100332	100417	+	86	24378532	SMUt19	-	^{15 Leu tRNA}
108558	108630	+	73	24378532	SMUt20	-	^{12 Thr tRNA}
185749	187300	+	1552	24378532	SMUr04	-	16S ribosomal RNA
187358	187430	+	73	24378532	SMUt21	-	^{02 Ala tRNA}
187689	190589	+	2901	24378532	SMUr05	-	23S ribosomal RNA
190770	190889	+	120	24378532	SMUr06	-	5S ribosomal RNA
190890	190962	+	73	24378532	SMUt22	-	^{13 Val tRNA}
190968	191038	+	71	24378532	SMUt23	-	^{01 Gly tRNA}
191073	191146	+	74	24378532	SMUt24	-	^{14 Ile tRNA}
191158	191229	+	72	24378532	SMUt25	-	^{04 Glu tRNA}
191244	191333	+	90	24378532	SMUt26	-	^{08 Ser tRNA}
191346	191419	+	74	24378532	SMUt27	-	^{16 Met tRNA}
191429	191504	+	76	24378532	SMUt28	-	^{17 Phe tRNA}
191517	191597	+	81	24378532	SMUt29	-	^{18 Tyr tRNA}
191604	191674	+	71	24378532	SMUt30	-	^{20 Trp tRNA}
191688	191760	+	73	24378532	SMUt31	-	^{09 His tRNA}
191777	191848	+	72	24378532	SMUt32	-	^{05 Gln tRNA}
191863	191946	+	84	24378532	SMUt33	-	^{15 Leu tRNA}
328109	328197	-	89	24378532	SMUt34	-	^{08 Ser tRNA}
328360	328442	-	83	24378532	SMUt35	-	^{15 Leu tRNA}
390169	390255	+	87	24378532	SMUt36	-	^{08 Ser tRNA}
1140675	1140746	-	72	24378532	SMUt37	-	^{11 Arg tRNA}
1142213	1142287	-	75	24378532	SMUt38	-	^{05 Gln tRNA}
1142444	1142524	-	81	24378532	SMUt39	-	^{18 Tyr tRNA}
1211962	1212033	-	72	24378532	SMUt40	-	^{11 Arg tRNA}
1654785	1654858	-	74	24378532	SMUt41	-	^{03 Pro tRNA}
1654911	1654984	-	74	24378532	SMUt42	-	^{11 Arg tRNA}
1654998	1655083	-	86	24378532	SMUt43	-	^{15 Leu tRNA}
1655091	1655162	-	72	24378532	SMUt44	-	^{01 Gly tRNA}
1655165	1655237	-	73	24378532	SMUt45	-	^{12 Thr tRNA}
1655252	1655333	-	82	24378532	SMUt46	-	^{15 Leu tRNA}
1655340	1655415	-	76	24378532	SMUt47	-	^{10 Lys tRNA}
1655443	1655515	-	73	24378532	SMUt48	-	^{06 Asp tRNA}
1655545	1655617	-	73	24378532	SMUt49	-	^{13 Val tRNA}
1655618	1655737	-	120	24378532	SMUr07	-	5S ribosomal RNA
1655918	1658818	-	2901	24378532	SMUr08	-	23S ribosomal RNA
1659077	1659149	-	73	24378532	SMUt50	-	^{02 Ala tRNA}
1659207	1660758	-	1552	24378532	SMUr09	-	16S ribososmal RNA
1678247	1678317	+	71	24378532	SMUt51	-	^{12 Thr tRNA}
1683393	1683464	-	72	24378532	SMUt52	-
1683467	1683539	-	73	24378532	SMUt53	-	^{12 Thr tRNA}
1683554	1683635	-	82	24378532	SMUt54	-	^{15 Leu tRNA}
1683642	1683717	-	76	24378532	SMUt55	-	^{10 Lys tRNA}
1683745	1683817	-	73	24378532	SMUt56	-	^{06 Asp tRNA}
1683847	1683919	-	73	24378532	SMUt57	-	^{13 Val tRNA}
1683920	1684039	-	120	24378532	SMUr10	-	5S ribosomal RNA
1684220	1687120	-	2901	24378532	SMUr11	-	23S ribosomal RNA
1687379	1687451	-	73	24378532	SMUt58	-	^{02 Ala tRNA}
1687509	1689060	-	1552	24378532	SMUr12	-	16S ribosomal RNA
1873122	1873195	-	74	24378532	SMUt59	-	^{07 Asn tRNA}
1873197	1873316	-	120	24378532	SMUr13	-	5S ribosomal RNA
1873497	1876397	-	2901	24378532	SMUr14	-	23S ribosomal RNA
1876656	1876728	-	73	24378532	SMUt60	-	^{02 Ala tRNA}
1876786	1878337	-	1552	24378532	SMUr15	-	16S ribosomal RNA
1904603	1904673	+	71	24378532	SMUt61	-	^{19 Cys tRNA}
1928139	1928211	+	73	24378532	SMUt62	-	^{10 Lys tRNA}
2026182	2026255	-	74	24378532	SMUt63	-	^{07 Asn tRNA}
2026261	2026332	-	72	24378532	SMUt64	-	^{04 Glu tRNA}
2026673	2026746	+	74	24378532	SMUt65	-	^{11 Arg tRNA}