Геном прокариот/Материалы:NC 004369

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Эта статья — часть материалов: лаборатории Биоинформатика, исследовательского проекта «Геном прокариот»

   LOCUS       NC_004369            3147090 bp    DNA     circular BCT 02-DEC-2005
   DEFINITION  Corynebacterium efficiens YS-314, complete genome.
   ACCESSION   NC_004369
   VERSION     NC_004369.1  GI:25026556
   KEYWORDS    .
   SOURCE      Corynebacterium efficiens YS-314
     ORGANISM  Corynebacterium efficiens YS-314
               Bacteria; Actinobacteria; Actinobacteridae; Actinomycetales;
               Corynebacterineae; Corynebacteriaceae; Corynebacterium.
   REFERENCE   1  (bases 1 to 3147090)
     AUTHORS   Nishio,Y., Nakamura,Y., Kawarabayasi,Y., Usuda,Y., Kimura,E.,
               Sugimoto,S., Matsui,K., Yamagishi,A., Kikuchi,H., Ikeo,K. and
               Gojobori,T.
     TITLE     Comparative complete genome sequence analysis of the amino acid
               replacements responsible for the thermostability of Corynebacterium
               efficiens
     JOURNAL   Genome Res. 13 (7), 1572-1579 (2003)
      PUBMED   12840036
   REFERENCE   2  (bases 1 to 3147090)
     AUTHORS   .
     CONSRTM   NCBI Genome Project
     TITLE     Direct Submission
     JOURNAL   Submitted (15-NOV-2002) National Center for Biotechnology
               Information, NIH, Bethesda, MD 20894, USA
   REFERENCE   3  (bases 1 to 3147090)
     AUTHORS   Kawarabayasi,Y., Yamazaki,J., Hino,Y., Kikuchi,H. and
               Director-General of Biotechnology Center.
     TITLE     Direct Submission
     JOURNAL   Submitted (17-MAY-2002) Director-General of Biotechnology Center,
               National Institute of Technology and Evaluation, Biotechnology
               Center; Nishihara 2-49-10, Shibuya-ku, Tokyo 151-0066, Japan
               (E-mail:bio@nite.go.jp, Tel:81-3-3481-1933, Fax:81-3-3481-8424)
   COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
               NCBI review. The reference sequence was derived from BA000035.
               COMPLETENESS: full length.

Расположение РНК[править]

Начало	Конец	Направление	Длина	PID	Ген	COG	Комментарий
17345	17421	+	77	25026556	CEtRNA01	-	Anticodon: GAT
17429	17501	+	73	25026556	CEtRNA02	-	Anticodon: TGC
42450	42535	+	86	25026556	CEtRNA03	-	Anticodon: CAG
194877	194961	+	85	25026556	CEtRNA04	-	Anticodon: TGA
204649	204737	+	89	25026556	CEtRNA05	-	Anticodon: GCT
204771	204846	+	76	25026556	CEtRNA06	-	Anticodon: ACG
206956	207031	+	76	25026556	CEtRNA07	-	Anticodon: ACG
209554	209644	+	91	25026556	CEtRNA08	-	Anticodon: CGA
219828	219915	-	88	25026556	CEtRNA09	-	Anticodon: GGA
295582	295658	-	77	25026556	CEtRNA10	-	Anticodon: CGG
338816	338891	+	76	25026556	CEtRNA11	-	^{12 Thr tRNA}
521492	521574	+	83	25026556	CEtRNA12	-	^{18 Tyr tRNA}
522152	522227	+	76	25026556	CEtRNA13	-	^{12 Thr tRNA}
522280	522351	+	72	25026556	CEtRNA14	-	^{16 Met tRNA}
522508	522583	+	76	25026556	CEtRNA15	-	^{20 Trp tRNA}
861148	861224	+	77	25026556	CEtRNA16	-	^{16 Met tRNA}
861809	861885	+	77	25026556	CEtRNA17	-	^{16 Met tRNA}
931679	933086	+	1408	25026556	CErRNA01	-	16S ribosomal RNA
933549	936631	+	3083	25026556	CErRNA02	-	23S ribosomal RNA
936756	936875	+	120	25026556	CErRNA03	-	5S ribosomal RNA
975209	975284	-	76	25026556	CEtRNA18	-	^{11 Arg tRNA}
1091956	1092027	-	72	25026556	CEtRNA19	-	^{05 Gln tRNA}
1105057	1105130	+	74	25026556	CEtRNA20	-	^{15 Leu tRNA}
1334714	1334786	-	73	25026556	CEtRNA21	-	^{11 Arg tRNA}
1468116	1468187	+	72	25026556	CEtRNA22	-	^{05 Gln tRNA}
1468227	1468302	+	76	25026556	CEtRNA23	-	^{04 Glu tRNA}
1469098	1469170	+	73	25026556	CEtRNA24	-	^{04 Glu tRNA}
1478138	1478209	+	72	25026556	CEtRNA25	-	^{05 Gln tRNA}
1478249	1478324	+	76	25026556	CEtRNA26	-	^{04 Glu tRNA}
1611156	1612563	+	1408	25026556	CErRNA04	-	16S ribosomal RNA
1613026	1616107	+	3082	25026556	CErRNA05	-	23S ribosomal RNA
1616231	1616350	+	120	25026556	CErRNA06	-	5S ribosomal RNA
1646332	1646408	-	77	25026556	CEtRNA28	-	^{03 Pro tRNA}
1733328	1733413	+	86	25026556	CEtRNA29	-	^{15 Leu tRNA}
1733516	1733601	+	86	25026556	CEtRNA30	-	^{15 Leu tRNA}
1886432	1886504	-	73	25026556	CEtRNA31	-	^{01 Gly tRNA}
1886537	1886611	-	75	25026556	CEtRNA32	-	^{13 Val tRNA}
1886648	1886720	-	73	25026556	CEtRNA33	-	^{01 Gly tRNA}
1886753	1886827	-	75	25026556	CEtRNA34	-	^{13 Val tRNA}
1886837	1886907	-	71	25026556	CEtRNA35	-	^{19 Cys tRNA}
1886949	1887021	-	73	25026556	CEtRNA36	-	^{01 Gly tRNA}
1887377	1887451	+	75	25026556	CEtRNA37	-	^{13 Val tRNA}
2275298	2275370	-	73	25026556	CEtRNA38	-	^{13 Val tRNA}
2297219	2297292	-	74	25026556	CEtRNA39	-	^{16 Met tRNA}
2299084	2299156	+	73	25026556	CEtRNA40	-	^{07 Asn tRNA}
2462328	2462401	-	74	25026556	CEtRNA41	-	^{03 Pro tRNA}
2462773	2462844	-	72	25026556	CEtRNA42	-	^{01 Gly tRNA}
2504980	2505056	+	77	25026556	CEtRNA43	-	^{11 Arg tRNA}
2517603	2517678	+	76	25026556	CEtRNA44	-	^{09 His tRNA}
2524659	2524731	+	73	25026556	CEtRNA45	-	^{10 Lys tRNA}
2524825	2524900	+	76	25026556	CEtRNA46	-	^{10 Lys tRNA}
2554958	2555039	-	82	25026556	CEtRNA47	-	^{15 Leu tRNA}
2584755	2584827	-	73	25026556	CEtRNA48	-	^{02 Ala tRNA}
2584859	2584931	-	73	25026556	CEtRNA49	-	^{02 Ala tRNA}
2594885	2595004	-	120	25026556	CErRNA07	-	5S ribosomal RNA
2595129	2598210	-	3082	25026556	CErRNA08	-	23S ribosomal RNA
2598674	2600081	-	1408	25026556	CErRNA09	-	16S ribosomal RNA
2606283	2606358	-	76	25026556	CEtRNA50	-	^{17 Phe tRNA}
2606391	2606464	-	74	25026556	CEtRNA51	-	^{06 Asp tRNA}
2608946	2609022	-	77	25026556	CEtRNA52	-	^{06 Asp tRNA}
2609052	2609127	-	76	25026556	CEtRNA53	-	^{04 Glu tRNA}
2621684	2621759	-	76	25026556	CEtRNA54	-	^{10 Lys tRNA}
2672375	2672447	-	73	25026556	CEtRNA55	-	^{12 Thr tRNA}
2833871	2833944	+	74	25026556	CEtRNA56	-	^{01 Gly tRNA}
2977401	2977520	-	120	25026556	CErRNA10	-	5S ribosomal RNA
2977645	2980726	-	3082	25026556	CErRNA11	-	23S ribosomal RNA
2981190	2982597	-	1408	25026556	CErRNA12	-	16S ribosomal RNA
2986276	2986395	-	120	25026556	CErRNA13	-	5S ribosomal RNA
2986520	2989602	-	3083	25026556	CErRNA14	-	23S ribosomal RNA
2990066	2991474	-	1409	25026556	CErRNA15	-	16S ribosomal RNA