Геном прокариот/Материалы:NC 004606

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Эта статья — часть материалов: лаборатории Биоинформатика, исследовательского проекта «Геном прокариот»

   LOCUS       NC_004606            1894275 bp    DNA     circular BCT 21-JUN-2007
   DEFINITION  Streptococcus pyogenes SSI-1, complete genome.
   ACCESSION   NC_004606
   VERSION     NC_004606.1  GI:28894912
   KEYWORDS    .
   SOURCE      Streptococcus pyogenes SSI-1
     ORGANISM  Streptococcus pyogenes SSI-1
               Bacteria; Firmicutes; Lactobacillales; Streptococcaceae;
               Streptococcus.
   REFERENCE   1  (bases 1 to 1894275)
     AUTHORS   Nakagawa,I., Kurokawa,K., Yamashita,A., Nakata,M., Tomiyasu,Y.,
               Okahashi,N., Kawabata,S., Yamazaki,K., Shiba,T., Yasunaga,T.,
               Hayashi,H., Hattori,M. and Hamada,S.
     TITLE     Genome sequence of an M3 strain of Streptococcus pyogenes reveals a
               large-scale genomic rearrangement in invasive strains and new
               insights into phage evolution
     JOURNAL   Genome Res. 13 (6A), 1042-1055 (2003)
      PUBMED   12799345
   REFERENCE   2  (bases 1 to 1894275)
     CONSRTM   NCBI Genome Project
     TITLE     Direct Submission
     JOURNAL   Submitted (10-MAR-2003) National Center for Biotechnology
               Information, NIH, Bethesda, MD 20894, USA
   REFERENCE   3  (bases 1 to 1894275)
     AUTHORS   Yamashita,A., Nakagawa,I., Kurokawa,K., Nakata,M., Tomiyasu,Y.,
               Yamazaki,K., Okahashi,N., Kawabata,S., Yasunaga,T., Hattori,M.,
               Hayashi,H. and Hamada,S.
     TITLE     Direct Submission
     JOURNAL   Submitted (01-MAY-2002) Ken Kurokawa, Osaka University, Genome
               Information Research Center; 3-1, Yamadaoka, Suita, Osaka 565-0871,
               Japan (E-mail:ken@gen-info.osaka-u.ac.jp,
               URL:http://www.gen-info.osaka-u.ac.jp/, Tel:81-6-6879-8365,
               Fax:81-6-6879-2047)
   COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
               NCBI review. The reference sequence was derived from BA000034.
               COMPLETENESS: full length.

Расположение РНК[править]

Начало	Конец	Направление	Длина	PID	Ген	COG	Комментарий
17066	18615	+	1550	28894912	SPsr01	-	16S ribosomal RNA
18665	18740	+	76	28894912	SPst01	-	^{02 Ala tRNA}
19037	21937	+	2901	28894912	SPsr02	-	23S ribosomal RNA
22024	22140	+	117	28894912	SPsr11	-	5S ribosomal RNA
22158	22230	+	73	28894912	SPst02	-	^{13 Val tRNA}
22248	22320	+	73	28894912	SPst03	-	^{06 Asp tRNA}
22352	22424	+	73	28894912	SPst04	-	^{10 Lys tRNA}
22430	22511	+	82	28894912	SPst05	-	^{15 Leu tRNA}
22522	22594	+	73	28894912	SPst06	-	^{12 Thr tRNA}
22607	22678	+	72	28894912	SPst07	-	^{01 Gly tRNA}
22687	22771	+	85	28894912	SPst08	-	^{15 Leu tRNA}
22788	22864	+	77	28894912	SPst09	-	^{11 Arg tRNA}
22868	22941	+	74	28894912	SPst10	-	^{03 Pro tRNA}
22947	23020	+	74	28894912	SPst11	-	^{16 Met tRNA}
23041	23114	+	74	28894912	SPst12	-	^{16 Met tRNA}
23137	23226	+	90	28894912	SPst13	-	^{08 Ser tRNA}
23236	23309	+	74	28894912	SPst14	-	^{16 Met tRNA}
23330	23402	+	73	28894912	SPst15	-	^{17 Phe tRNA}
23415	23485	+	71	28894912	SPst16	-	^{01 Gly tRNA}
23520	23593	+	74	28894912	SPst17	-	^{14 Ile tRNA}
23603	23690	+	88	28894912	SPst18	-	^{08 Ser tRNA}
74045	75594	+	1550	28894912	SPsr03	-	16S ribosomal RNA
75644	75719	+	76	28894912	SPst19	-	^{02 Ala tRNA}
76016	78916	+	2901	28894912	SPsr04	-	23S ribosomal RNA
79003	79119	+	117	28894912	SPsr12	-	5S ribosomal RNA
79137	79209	+	73	28894912	SPst20	-	^{13 Val tRNA}
79215	79285	+	71	28894912	SPst21	-	^{01 Gly tRNA}
79320	79393	+	74	28894912	SPst22	-	^{14 Ile tRNA}
79416	79487	+	72	28894912	SPst23	-	^{04 Glu tRNA}
79498	79587	+	90	28894912	SPst24	-	^{08 Ser tRNA}
79597	79670	+	74	28894912	SPst25	-	^{16 Met tRNA}
79691	79763	+	73	28894912	SPst26	-	^{17 Phe tRNA}
79783	79863	+	81	28894912	SPst27	-	^{18 Tyr tRNA}
79870	79940	+	71	28894912	SPst28	-	^{20 Trp tRNA}
79952	80024	+	73	28894912	SPst29	-	^{09 His tRNA}
80033	80104	+	72	28894912	SPst30	-	^{05 Gln tRNA}
80124	80207	+	84	28894912	SPst31	-	^{15 Leu tRNA}
250100	251649	+	1550	28894912	SPsr05	-	16S ribosomal RNA
251699	251774	+	76	28894912	SPst32	-	^{02 Ala tRNA}
252071	254971	+	2901	28894912	SPsr06	-	23S ribosomal RNA
255058	255174	+	117	28894912	SPsr13	-	5S ribosomal RNA
255180	255253	+	74	28894912	SPst33	-	^{07 Asn tRNA}
255333	255406	+	74	28894912	SPst34	-	^{11 Arg tRNA}
265022	265107	+	86	28894912	SPst35	-	^{15 Leu tRNA}
403028	403114	+	87	28894912	SPst36	-	^{08 Ser tRNA}
537236	538785	+	1550	28894912	SPsr07	-	16S ribosomal RNA
538835	538910	+	76	28894912	SPst37	-	^{02 Ala tRNA}
539207	542107	+	2901	28894912	SPsr08	-	23S ribosomal RNA
542194	542310	+	117	28894912	SPsr14	-	5S ribosomal RNA
542328	542400	+	73	28894912	SPst38	-	^{13 Val tRNA}
542418	542490	+	73	28894912	SPst39	-	^{06 Asp tRNA}
542522	542594	+	73	28894912	SPst40	-	^{10 Lys tRNA}
542600	542681	+	82	28894912	SPst41	-	^{15 Leu tRNA}
542692	542764	+	73	28894912	SPst42	-	^{12 Thr tRNA}
542800	542873	+	74	28894912	SPst43	-	^{14 Ile tRNA}
542896	542967	+	72	28894912	SPst44	-	^{04 Glu tRNA}
613582	613652	-	71	28894912	SPst45	-	^{12 Thr tRNA}
1205373	1205444	-	72	28894912	SPst46	-	^{11 Arg tRNA}
1206886	1206960	-	75	28894912	SPst47	-	^{05 Gln tRNA}
1207011	1207091	-	81	28894912	SPst48	-	^{18 Tyr tRNA}
1375171	1375242	-	72	28894912	SPst49	-	^{11 Arg tRNA}
1635251	1635324	-	74	28894912	SPst50	-	^{11 Arg tRNA}
1635404	1635477	-	74	28894912	SPst51	-	^{07 Asn tRNA}
1635483	1635599	-	117	28894912	SPsr15	-	5S ribosomal RNA
1635686	1638586	-	2901	28894912	SPsr09	-	23S ribosomal RNA
1638883	1638958	-	76	28894912	SPst52	-	^{02 Ala tRNA}
1639008	1640557	-	1550	28894912	SPsr10	-	16S ribosomal RNA
1725327	1725399	+	73	28894912	SPst53	-	^{10 Lys tRNA}
1785150	1785220	-	71	28894912	SPst54	-	^{19 Cys tRNA}
1889747	1889820	-	74	28894912	SPst55	-	^{07 Asn tRNA}
1889854	1889925	-	72	28894912	SPst56	-	^{04 Glu tRNA}
1891266	1891339	+	74	28894912	SPst57	-	^{11 Arg tRNA}