Геном прокариот/Материалы:NC 005966
(перенаправлено с «Материалы:NC 005966»)
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Базовый уровень статей |
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LOCUS NC_005966 3598621 bp DNA circular BCT 17-JAN-2006
DEFINITION Acinetobacter sp. ADP1, complete genome.
ACCESSION NC_005966
VERSION NC_005966.1 GI:50083297
KEYWORDS complete genome.
SOURCE Acinetobacter sp. ADP1
ORGANISM Acinetobacter sp. ADP1
Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales;
Moraxellaceae; Acinetobacter.
REFERENCE 1 (bases 1 to 3598621)
AUTHORS Barbe,V., Vallenet,D., Fonknechten,N., Kreimeyer,A., Oztas,S.,
Labarre,L., Cruveiller,S., Robert,C., Duprat,S., Wincker,P.,
Ornston,L.N., Weissenbach,J., Marliere,P., Cohen,G.N. and
Medigue,C.
TITLE Unique features revealed by the genome sequence of Acinetobacter
sp. ADP1, a versatile and naturally transformation competent
bacterium
JOURNAL (er) Nucleic Acids Res. (2004) In press
PUBMED 15514110
REFERENCE 2 (bases 1 to 3598621)
CONSRTM NCBI Genome Project
TITLE Direct Submission
JOURNAL Submitted (10-SEP-2004) National Center for Biotechnology
Information, NIH, Bethesda, MD 20894, USA
REFERENCE 3 (bases 1 to 3598621)
AUTHORS Barbe,V., Vallenet,D., Fonknechten,N., Kreimeyer,A., Oztas,S.,
Labarre,L., Cruveiller,S., Robert,C., Duprat,S., Wincker,P.,
Ornston,L.N., Weissenbach,J., Marliere,P., Cohen,G.N. and
Medigue,C.
TITLE Direct Submission
JOURNAL Submitted (29-JUN-2004) Genoscope, Centre National de Sequencage,
BP 191 Evry cedex 91006, France
COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final
NCBI review. The reference sequence was derived from CR543861.
COMPLETENESS: full length.
Расположение РНК
[править]| Начало | Конец | Направление | Длина | PID | Ген | COG | Комментарий |
|---|---|---|---|---|---|---|---|
| 18416 | 19945 | + | 1530 | 50083297 | ACIADrRNA16S_1 | - | 16S |
| 20007 | 20083 | + | 77 | 50083297 | ACIADtRNAIle_1 | - | 14 Ile tRNA |
| 20120 | 20195 | + | 76 | 50083297 | ACIADtRNAAla_2 | - | 02 Ala tRNA |
| 20539 | 23437 | + | 2899 | 50083297 | ACIADrRNA23S_2 | - | 23S |
| 23623 | 23738 | + | 116 | 50083297 | ACIADrRNA5S_3 | - | 5S |
| 145346 | 145421 | - | 76 | 50083297 | ACIADtRNAGly_3 | - | 01 Gly tRNA |
| 145463 | 145538 | - | 76 | 50083297 | ACIADtRNAGly_4 | - | 01 Gly tRNA |
| 213201 | 214730 | + | 1530 | 50083297 | ACIADrRNA16S_4 | - | 16S |
| 214792 | 214868 | + | 77 | 50083297 | ACIADtRNAIle_5 | - | 14 Ile tRNA |
| 214905 | 214980 | + | 76 | 50083297 | ACIADtRNAAla_6 | - | 02 Ala tRNA |
| 215324 | 218222 | + | 2899 | 50083297 | ACIADrRNA23S_5 | - | 23S |
| 218408 | 218523 | + | 116 | 50083297 | ACIADrRNA5S_6 | - | 5S |
| 296755 | 296830 | + | 76 | 50083297 | ACIADtRNAThr_7 | - | 12 Thr tRNA |
| 296889 | 296972 | + | 84 | 50083297 | ACIADtRNATyr_8 | - | 18 Tyr tRNA |
| 297010 | 297085 | + | 76 | 50083297 | ACIADtRNAGly_9 | - | 01 Gly tRNA |
| 297099 | 297173 | + | 75 | 50083297 | ACIADtRNAThr_10 | - | 12 Thr tRNA |
| 298591 | 298666 | + | 76 | 50083297 | ACIADtRNATrp_11 | - | 20 Trp tRNA |
| 357798 | 357882 | + | 85 | 50083297 | ACIADtRNALeu_12 | - | 15 Leu tRNA |
| 358378 | 358454 | + | 77 | 50083297 | ACIADtRNAMet_13 | - | 16 Met tRNA |
| 358542 | 358618 | + | 77 | 50083297 | ACIADtRNAMet_14 | - | 16 Met tRNA |
| 433598 | 433673 | - | 76 | 50083297 | ACIADtRNALys_15 | - | 10 Lys tRNA |
| 433782 | 433857 | - | 76 | 50083297 | ACIADtRNALys_16 | - | 10 Lys tRNA |
| 581949 | 582035 | + | 87 | 50083297 | ACIADtRNALeu_17 | - | 15 Leu tRNA |
| 642743 | 642819 | + | 77 | 50083297 | ACIADtRNAPro_18 | - | 03 Pro tRNA |
| 642880 | 642956 | + | 77 | 50083297 | ACIADtRNAArg_19 | - | 11 Arg tRNA |
| 642995 | 643070 | + | 76 | 50083297 | ACIADtRNAHis_20 | - | 09 His tRNA |
| 643075 | 643151 | + | 77 | 50083297 | ACIADtRNAPro_21 | - | 03 Pro tRNA |
| 646038 | 647567 | + | 1530 | 50083297 | ACIADrRNA16S_7 | - | 16S |
| 647629 | 647705 | + | 77 | 50083297 | ACIADtRNAIle_22 | - | 14 Ile tRNA |
| 647742 | 647817 | + | 76 | 50083297 | ACIADtRNAAla_23 | - | 02 Ala tRNA |
| 648251 | 651149 | + | 2899 | 50083297 | ACIADrRNA23S_8 | - | 23S |
| 651336 | 651451 | + | 116 | 50083297 | ACIADrRNA5S_9 | - | 5S |
| 786125 | 786200 | + | 76 | 50083297 | ACIADtRNAVal_24 | - | 13 Val tRNA |
| 786224 | 786300 | + | 77 | 50083297 | ACIADtRNAAsp_25 | - | 06 Asp tRNA |
| 786348 | 786424 | + | 77 | 50083297 | ACIADtRNAAsp_26 | - | 06 Asp tRNA |
| 786447 | 786522 | + | 76 | 50083297 | ACIADtRNAVal_27 | - | 13 Val tRNA |
| 786558 | 786634 | + | 77 | 50083297 | ACIADtRNAAsp_28 | - | 06 Asp tRNA |
| 786732 | 786807 | + | 76 | 50083297 | ACIADtRNAVal_29 | - | 13 Val tRNA |
| 914849 | 915208 | + | 360 | 50083297 | ACIADtmRNA | - | mRNA template for tagging proteins |
| 1135910 | 1135985 | - | 76 | 50083297 | ACIADtRNAGlu_30 | - | 04 Glu tRNA |
| 1136011 | 1136086 | - | 76 | 50083297 | ACIADtRNAGlu_31 | - | 04 Glu tRNA |
| 1139804 | 1139879 | - | 76 | 50083297 | ACIADtRNAGlu_32 | - | 04 Glu tRNA |
| 1140169 | 1140244 | - | 76 | 50083297 | ACIADtRNAGlu_33 | - | 04 Glu tRNA |
| 1148051 | 1148140 | + | 90 | 50083297 | ACIADtRNASer_34 | - | 08 Ser tRNA |
| 1334581 | 1334665 | + | 85 | 50083297 | ACIADtRNALeu_35 | - | 15 Leu tRNA |
| 1334716 | 1334789 | + | 74 | 50083297 | ACIADtRNATrp_36 | - | 20 Trp tRNA |
| 1334814 | 1334898 | + | 85 | 50083297 | ACIADtRNALeu_37 | - | 15 Leu tRNA |
| 1337634 | 1337709 | - | 76 | 50083297 | ACIADtRNAAsn_38 | - | 07 Asn tRNA |
| 1340632 | 1340707 | - | 76 | 50083297 | ACIADtRNAAsn_39 | - | 07 Asn tRNA |
| 1340715 | 1340790 | - | 76 | 50083297 | ACIADtRNAAsn_40 | - | 07 Asn tRNA |
| 1380047 | 1380144 | + | 98 | 50083297 | ACIADffsRNA | - | 4.5S RNA component of Signal Recognition Particle (SRP) |
| 1478872 | 1478947 | - | 76 | 50083297 | ACIADtRNAGly_41 | - | 01 Gly tRNA |
| 1660700 | 1662229 | + | 1530 | 50083297 | ACIADrRNA16S_10 | - | 16S |
| 1662291 | 1662367 | + | 77 | 50083297 | ACIADtRNAIle_42 | - | 14 Ile tRNA |
| 1662404 | 1662479 | + | 76 | 50083297 | ACIADtRNAAla_43 | - | 02 Ala tRNA |
| 1662823 | 1665721 | + | 2899 | 50083297 | ACIADrRNA23S_11 | - | 23S |
| 1665907 | 1666022 | + | 116 | 50083297 | ACIADrRNA5S_12 | - | 5S |
| 1793951 | 1794027 | + | 77 | 50083297 | ACIADtRNAMet_44 | - | 16 Met tRNA |
| 2034702 | 2034778 | + | 77 | 50083297 | ACIADtRNAMet_45 | - | 16 Met tRNA |
| 2169643 | 2169719 | - | 77 | 50083297 | ACIADtRNAVal_46 | - | 13 Val tRNA |
| 2230240 | 2230316 | + | 77 | 50083297 | ACIADtRNAArg_47 | - | 11 Arg tRNA |
| 2535413 | 2535488 | + | 76 | 50083297 | ACIADtRNAAsn_48 | - | 07 Asn tRNA |
| 2752239 | 2752328 | - | 90 | 50083297 | ACIADtRNASer_49 | - | 08 Ser tRNA |
| 2786083 | 2786156 | + | 74 | 50083297 | ACIADtRNACys_50 | - | 19 Cys tRNA |
| 2786172 | 2786257 | + | 86 | 50083297 | ACIADtRNALeu_51 | - | 15 Leu tRNA |
| 2787951 | 2788036 | + | 86 | 50083297 | ACIADtRNALeu_52 | - | 15 Leu tRNA |
| 2831438 | 2831514 | - | 77 | 50083297 | ACIADtRNAMet_53 | - | 16 Met tRNA |
| 2831743 | 2831819 | - | 77 | 50083297 | ACIADtRNAMet_54 | - | 16 Met tRNA |
| 2831879 | 2832237 | + | 359 | 50083297 | ACIADrnpBRNA | - | RNA component of the ribonuclease P |
| 2843775 | 2843849 | + | 75 | 50083297 | ACIADtRNAGln_55 | - | 05 Gln tRNA |
| 2843872 | 2843946 | + | 75 | 50083297 | ACIADtRNAGln_56 | - | 05 Gln tRNA |
| 2843969 | 2844043 | + | 75 | 50083297 | ACIADtRNAGln_57 | - | 05 Gln tRNA |
| 2844061 | 2844135 | + | 75 | 50083297 | ACIADtRNAGln_58 | - | 05 Gln tRNA |
| 2844227 | 2844301 | + | 75 | 50083297 | ACIADtRNAGln_59 | - | 05 Gln tRNA |
| 2899595 | 2899667 | + | 73 | 50083297 | ACIADtRNAArg_60 | - | 11 Arg tRNA |
| 2941950 | 2942065 | - | 116 | 50083297 | ACIADrRNA5S_13 | - | 5S |
| 2942251 | 2945149 | - | 2899 | 50083297 | ACIADrRNA23S_14 | - | 23S |
| 2945584 | 2945659 | - | 76 | 50083297 | ACIADtRNAAla_61 | - | 02 Ala tRNA |
| 2945696 | 2945772 | - | 77 | 50083297 | ACIADtRNAIle_62 | - | 14 Ile tRNA |
| 2945834 | 2947363 | - | 1530 | 50083297 | ACIADrRNA16S_15 | - | 16S |
| 3071047 | 3071162 | - | 116 | 50083297 | ACIADrRNA5S_16 | - | 5S |
| 3071348 | 3074246 | - | 2899 | 50083297 | ACIADrRNA23S_17 | - | 23S |
| 3074681 | 3074756 | - | 76 | 50083297 | ACIADtRNAAla_63 | - | 02 Ala tRNA |
| 3074793 | 3074869 | - | 77 | 50083297 | ACIADtRNAIle_64 | - | 14 Ile tRNA |
| 3074931 | 3076460 | - | 1530 | 50083297 | ACIADrRNA16S_18 | - | 16S |
| 3102414 | 3102490 | - | 77 | 50083297 | ACIADtRNAArg_65 | - | 11 Arg tRNA |
| 3107432 | 3107508 | - | 77 | 50083297 | ACIADtRNAArg_66 | - | 11 Arg tRNA |
| 3107556 | 3107632 | - | 77 | 50083297 | ACIADtRNAArg_67 | - | 11 Arg tRNA |
| 3107644 | 3107733 | - | 90 | 50083297 | ACIADtRNASer_68 | - | 08 Ser tRNA |
| 3281996 | 3282071 | + | 76 | 50083297 | ACIADtRNAAla_69 | - | 02 Ala tRNA |
| 3282097 | 3282172 | + | 76 | 50083297 | ACIADtRNAGlu_70 | - | 04 Glu tRNA |
| 3308631 | 3308706 | - | 76 | 50083297 | ACIADtRNAPhe_71 | - | 17 Phe tRNA |
| 3308833 | 3308908 | - | 76 | 50083297 | ACIADtRNAPhe_72 | - | 17 Phe tRNA |
| 3327459 | 3327548 | + | 90 | 50083297 | ACIADtRNASer_73 | - | 08 Ser tRNA |
| 3361111 | 3361186 | + | 76 | 50083297 | ACIADtRNAThr_74 | - | 12 Thr tRNA |
| 3559459 | 3559574 | - | 116 | 50083297 | ACIADrRNA5S_19 | - | 5S |
| 3559760 | 3562658 | - | 2899 | 50083297 | ACIADrRNA23S_20 | - | 23S |
| 3563003 | 3563078 | - | 76 | 50083297 | ACIADtRNAAla_75 | - | 02 Ala tRNA |
| 3563115 | 3563191 | - | 77 | 50083297 | ACIADtRNAIle_76 | - | 14 Ile tRNA |
| 3563253 | 3564782 | - | 1530 | 50083297 | ACIADrRNA16S_21 | - | 16S |