Геном прокариот/Материалы:NC 006138
(перенаправлено с «Материалы:NC 006138»)
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Базовый уровень статей |
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LOCUS NC_006138 3523383 bp DNA circular BCT 29-JUN-2007
DEFINITION Desulfotalea psychrophila LSv54, complete genome.
ACCESSION NC_006138
VERSION NC_006138.1 GI:51243852
KEYWORDS complete genome.
SOURCE Desulfotalea psychrophila LSv54
ORGANISM Desulfotalea psychrophila LSv54
Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales;
Desulfobulbaceae; Desulfotalea.
REFERENCE 1 (bases 1 to 3523383)
AUTHORS Rabus,R., Ruepp,A., Frickey,T., Rattei,T., Fartmann,B., Stark,M.,
Bauer,M., Zibat,A., Lombardot,T., Becker,I., Amann,J., Gellner,H.,
Teeling,H., Leuschner,W.D., Gloeckner,F.-O., Lupas,A.N., Amann,R.
and Klenk,H.-P.
TITLE The genome of Desulfotalea psychrophila, a sulfate-reducing
bacterium from permanently cold Arctic sediments
JOURNAL Environ. Microbiol. 6 (9), 887-902 (2004)
PUBMED 15305914
REFERENCE 2 (bases 1 to 3523383)
CONSRTM NCBI Genome Project
TITLE Direct Submission
JOURNAL Submitted (16-AUG-2004) National Center for Biotechnology
Information, NIH, Bethesda, MD 20894, USA
REFERENCE 3 (bases 1 to 3523383)
AUTHORS Klenk,H.-P.
TITLE Direct Submission
JOURNAL Submitted (11-JUN-2004) e.gene Biotechnologie GmbH, Poeckinger
Fussweg 7a, Feldafing 82340, Germany
COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final
NCBI review. The reference sequence was derived from CR522870.
COMPLETENESS: full length.
Расположение РНК
[править]| Начало | Конец | Направление | Длина | PID | Ген | COG | Комментарий |
|---|---|---|---|---|---|---|---|
| 109126 | 109207 | - | 82 | 51243852 | DPt01 | - | 15 Leu tRNA |
| 109450 | 109531 | - | 82 | 51243852 | DPt02 | - | 15 Leu tRNA |
| 204878 | 204951 | - | 74 | 51243852 | DPt03 | - | 16 Met tRNA |
| 363838 | 363931 | + | 94 | 51243852 | DPt04 | - | Sec tRNA |
| 455456 | 455539 | - | 84 | 51243852 | DPt05 | - | 15 Leu tRNA |
| 569247 | 569612 | - | 366 | 51243852 | DPs01 | - | tmRNA |
| 671882 | 671953 | - | 72 | 51243852 | DPt06 | - | 01 Gly tRNA |
| 694725 | 694798 | - | 74 | 51243852 | DPt07 | - | 16 Met tRNA |
| 721238 | 721312 | - | 75 | 51243852 | DPt08 | - | 03 Pro tRNA |
| 721353 | 721425 | - | 73 | 51243852 | DPt09 | - | 07 Asn tRNA |
| 763119 | 763193 | - | 75 | 51243852 | DPt10 | - | 04 Glu tRNA |
| 763204 | 763276 | - | 73 | 51243852 | DPt11 | - | 10 Lys tRNA |
| 766549 | 766623 | - | 75 | 51243852 | DPt12 | - | 04 Glu tRNA |
| 766643 | 766715 | - | 73 | 51243852 | DPt13 | - | 10 Lys tRNA |
| 785820 | 785902 | + | 83 | 51243852 | DPt14 | - | 08 Ser tRNA |
| 785914 | 786002 | + | 89 | 51243852 | DPt15 | - | 08 Ser tRNA |
| 806221 | 807760 | + | 1540 | 51243852 | DPr01 | - | 16S ribosomal RNA |
| 807932 | 808005 | + | 74 | 51243852 | DPt16 | - | 14 Ile tRNA |
| 808013 | 808085 | + | 73 | 51243852 | DPt17 | - | 02 Ala tRNA |
| 808358 | 811273 | + | 2916 | 51243852 | DPr02 | - | 23S ribosomal RNA |
| 811329 | 811457 | + | 129 | 51243852 | DPr03 | - | 5S ribosomal RNA |
| 814573 | 816111 | + | 1539 | 51243852 | DPr04 | - | 16S ribosomal RNA |
| 816463 | 819378 | + | 2916 | 51243852 | DPr05 | - | 23S ribosomal RNA |
| 819434 | 819562 | + | 129 | 51243852 | DPr06 | - | 5S ribosomal RNA |
| 822143 | 823681 | + | 1539 | 51243852 | DPr07 | - | 16S ribosomal RNA |
| 824033 | 826950 | + | 2918 | 51243852 | DPr08 | - | 23S ribosomal RNA |
| 827006 | 827134 | + | 129 | 51243852 | DPr09 | - | 5S ribosomal RNA |
| 1046822 | 1046895 | + | 74 | 51243852 | DPt18 | - | 11 Arg tRNA |
| 1098886 | 1100425 | + | 1540 | 51243852 | DPr10 | - | 16S ribosomal RNA |
| 1100777 | 1103693 | + | 2917 | 51243852 | DPr11 | - | 23S ribosomal RNA |
| 1103749 | 1103877 | + | 129 | 51243852 | DPr12 | - | 5S ribosomal RNA |
| 1171946 | 1172019 | - | 74 | 51243852 | DPt19 | - | 11 Arg tRNA |
| 1217738 | 1217810 | - | 73 | 51243852 | DPt20 | - | 02 Ala tRNA |
| 1236403 | 1236486 | - | 84 | 51243852 | DPt21 | - | 15 Leu tRNA |
| 1253754 | 1253826 | + | 73 | 51243852 | DPt22 | - | 12 Thr tRNA |
| 1253905 | 1253986 | + | 82 | 51243852 | DPt23 | - | 18 Tyr tRNA |
| 1254008 | 1254080 | + | 73 | 51243852 | DPt24 | - | 01 Gly tRNA |
| 1254103 | 1254175 | + | 73 | 51243852 | DPt25 | - | 12 Thr tRNA |
| 1255659 | 1255732 | + | 74 | 51243852 | DPt26 | - | 20 Trp tRNA |
| 1305274 | 1305347 | + | 74 | 51243852 | DPt27 | - | 11 Arg tRNA |
| 1389530 | 1389601 | - | 72 | 51243852 | DPt28 | - | 19 Cys tRNA |
| 1446518 | 1446646 | - | 129 | 51243852 | DPr13 | - | 5S ribosomal RNA |
| 1458622 | 1458750 | - | 129 | 51243852 | DPr14 | - | 5S ribosomal RNA |
| 1458806 | 1461724 | - | 2919 | 51243852 | DPr15 | - | 23S ribosomal RNA |
| 1462002 | 1462074 | - | 73 | 51243852 | DPt29 | - | 02 Ala tRNA |
| 1462082 | 1462155 | - | 74 | 51243852 | DPt30 | - | 14 Ile tRNA |
| 1462305 | 1463843 | - | 1539 | 51243852 | DPr16 | - | 16S ribosomal RNA |
| 1482940 | 1483011 | - | 72 | 51243852 | DPt31 | - | 01 Gly tRNA |
| 1586568 | 1586642 | - | 75 | 51243852 | DPt32 | - | 03 Pro tRNA |
| 1594869 | 1594940 | - | 72 | 51243852 | DPt33 | - | 13 Val tRNA |
| 1606559 | 1606641 | + | 83 | 51243852 | DPt34 | - | 08 Ser tRNA |
| 1787898 | 1787981 | - | 84 | 51243852 | DPt35 | - | 15 Leu tRNA |
| 1791403 | 1791484 | + | 82 | 51243852 | DPt36 | - | 15 Leu tRNA |
| 1925351 | 1926890 | + | 1540 | 51243852 | DPr17 | - | 16S ribosomal RNA |
| 1927267 | 1930182 | + | 2916 | 51243852 | DPr18 | - | 23S ribosomal RNA |
| 1930238 | 1930366 | + | 129 | 51243852 | DPr19 | - | 5S ribosomal RNA |
| 1946848 | 1946921 | - | 74 | 51243852 | DPt37 | - | 16 Met tRNA |
| 1946950 | 1947023 | - | 74 | 51243852 | DPt38 | - | 16 Met tRNA |
| 2009493 | 2009565 | - | 73 | 51243852 | DPt39 | - | 17 Phe tRNA |
| 2024798 | 2024870 | - | 73 | 51243852 | DPt40 | - | 17 Phe tRNA |
| 2106125 | 2106198 | + | 74 | 51243852 | DPt41 | - | 16 Met tRNA |
| 2154677 | 2156215 | + | 1539 | 51243852 | DPr20 | - | 16S ribosomal RNA |
| 2156592 | 2159507 | + | 2916 | 51243852 | DPr21 | - | 23S ribosomal RNA |
| 2159563 | 2159691 | + | 129 | 51243852 | DPr22 | - | 5S ribosomal RNA |
| 2262519 | 2262591 | + | 73 | 51243852 | DPt42 | - | 12 Thr tRNA |
| 2426699 | 2426772 | + | 74 | 51243852 | DPt43 | - | 09 His tRNA |
| 2607760 | 2607833 | - | 74 | 51243852 | DPt44 | - | 09 His tRNA |
| 2853781 | 2853852 | + | 72 | 51243852 | DPt45 | - | 04 Glu tRNA |
| 2874487 | 2874558 | + | 72 | 51243852 | DPt46 | - | 04 Glu tRNA |
| 2888211 | 2888284 | - | 74 | 51243852 | DPt47 | - | 06 Asp tRNA |
| 2888343 | 2888415 | - | 73 | 51243852 | DPt48 | - | 13 Val tRNA |
| 2888439 | 2888512 | - | 74 | 51243852 | DPt49 | - | 06 Asp tRNA |
| 2888571 | 2888643 | - | 73 | 51243852 | DPt50 | - | 13 Val tRNA |
| 2888666 | 2888739 | - | 74 | 51243852 | DPt51 | - | 06 Asp tRNA |
| 2888798 | 2888870 | - | 73 | 51243852 | DPt52 | - | 13 Val tRNA |
| 2888892 | 2888965 | - | 74 | 51243852 | DPt53 | - | 06 Asp tRNA |
| 2889024 | 2889096 | - | 73 | 51243852 | DPt54 | - | 13 Val tRNA |
| 2889119 | 2889192 | - | 74 | 51243852 | DPt55 | - | 06 Asp tRNA |
| 2889251 | 2889323 | - | 73 | 51243852 | DPt56 | - | 13 Val tRNA |
| 2889345 | 2889418 | - | 74 | 51243852 | DPt57 | - | 06 Asp tRNA |
| 2889481 | 2889553 | - | 73 | 51243852 | DPt58 | - | 13 Val tRNA |
| 3096346 | 3096417 | - | 72 | 51243852 | DPt59 | - | 05 Gln tRNA |
| 3096606 | 3096677 | - | 72 | 51243852 | DPt60 | - | 05 Gln tRNA |
| 3358387 | 3358468 | + | 82 | 51243852 | DPt61 | - | 18 Tyr tRNA |
| 3358583 | 3358655 | + | 73 | 51243852 | DPt62 | - | 12 Thr tRNA |
| 3396270 | 3396343 | - | 74 | 51243852 | DPt63 | - | 11 Arg tRNA |
| 3403887 | 3403960 | - | 74 | 51243852 | DPt64 | - | 11 Arg tRNA |