Геном прокариот/Материалы:NC 006142

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Эта статья — часть материалов: лаборатории Биоинформатика, исследовательского проекта «Геном прокариот»

   LOCUS       NC_006142            1111496 bp    DNA     circular BCT 03-APR-2006
   DEFINITION  Rickettsia typhi str. Wilmington, complete genome.
   ACCESSION   NC_006142
   VERSION     NC_006142.1  GI:51473215
   KEYWORDS    .
   SOURCE      Rickettsia typhi str. Wilmington
     ORGANISM  Rickettsia typhi str. Wilmington
               Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales;
               Rickettsiaceae; Rickettsieae; Rickettsia; typhus group.
   REFERENCE   1  (bases 1 to 1111496)
     AUTHORS   McLeod,M.P., Qin,X., Karpathy,S.E., Gioia,J., Highlander,S.K.,
               Fox,G.E., McNeill,T.Z., Jiang,H., Muzny,D., Jacob,L.S., Hawes,A.C.,
               Sodergren,E., Gill,R., Hume,J., Morgan,M., Fan,G., Amin,A.G.,
               Gibbs,R.A., Hong,C., Yu,X.-J., Walker,D.H. and Weinstock,G.M.
     TITLE     Complete Genome Sequence of Rickettsia typhi and Comparison with
               Sequences of Other Rickettsiae
     JOURNAL   J. Bacteriol. 186 (17), 5842-5855 (2004)
      PUBMED   15317790
   REFERENCE   2  (bases 1 to 1111496)
     CONSRTM   NCBI Genome Project
     TITLE     Direct Submission
     JOURNAL   Submitted (27-AUG-2004) National Center for Biotechnology
               Information, NIH, Bethesda, MD 20894, USA
   REFERENCE   3  (bases 1 to 1111496)
     AUTHORS   Weinstock,G.M.
     TITLE     Direct Submission
     JOURNAL   Submitted (21-NOV-2003) Human Genome Sequencing Center, Baylor
               College of Medicine, 1 Baylor Plaza, Houston, TX 77035, USA
   COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
               NCBI review. The reference sequence was derived from AE017197.
               COMPLETENESS: full length.

Расположение РНК

Начало	Конец	Направление	Длина	PID	Ген	COG	Комментарий
8851	8926	-	76	51473215	RT0009	-	^{17 Phe tRNA}
18164	18238	+	75	51473215	RT0016	-	^{04 Glu tRNA}
49021	49097	-	77	51473215	RT0036	-	^{16 Met tRNA}
73530	73604	-	75	51473215	RT0054	-	^{12 Thr tRNA}
156890	156965	+	76	51473215	RT0122	-	^{20 Trp tRNA}
189873	189948	-	76	51473215	RT0149	-	^{12 Thr tRNA}
256226	258987	+	2762	51473215	RT0200	-	23S ribosomal RNA
259213	259313	+	101	51473215	RT0202	-	5S ribosomal RNA
291448	291524	+	77	51473215	RT0227	-	^{16 Met tRNA}
336968	337042	+	75	51473215	RT0267	-	^{07 Asn tRNA}
440999	441073	+	75	51473215	RT0349	-	^{19 Cys tRNA}
469419	469494	+	76	51473215	RT0369	-	^{10 Lys tRNA}
469510	469586	+	77	51473215	RT0370	-	^{14 Ile tRNA}
566513	566600	-	88	51473215	RT0440	-	^{08 Ser tRNA}
584848	584938	-	91	51473215	RT0454	-	^{08 Ser tRNA}
599153	599229	+	77	51473215	RT0467	-	^{11 Arg tRNA}
599290	599364	-	75	51473215	RT0468	-	^{05 Gln tRNA}
608807	609191	-	385	51473215	RT0477	-	tmRNA involved in trans translation (10SaRNA)
644665	644741	+	77	51473215	RT0504	-	^{06 Asp tRNA}
645793	645868	-	76	51473215	RT0506	-	^{02 Ala tRNA}
649921	649997	+	77	51473215	RT0510	-	^{13 Val tRNA}
698354	698430	+	77	51473215	RT0545	-	^{11 Arg tRNA}
728672	728746	-	75	51473215	RT0562	-	^{02 Ala tRNA}
739677	739763	+	87	51473215	RT0571	-	^{15 Leu tRNA}
742580	742654	+	75	51473215	RT0573	-	^{01 Gly tRNA}
779669	781167	-	1499	51473215	RT0602	-	16S ribosomal RNA
814509	814584	-	76	51473215	RT0624	-	^{13 Val tRNA}
829903	829976	-	74	51473215	RT0654	-	^{01 Gly tRNA}
830072	830157	-	86	51473215	RT0655	-	^{18 Tyr tRNA}
839451	839536	+	86	51473215	RT0663	-	^{15 Leu tRNA}
876546	876622	+	77	51473215	RT0690	-	^{09 His tRNA}
910292	910802	-	511	51473215	RT0715	-	RNA component of RNAse P
919389	919480	+	92	51473215	RT0721	-	^{08 Ser tRNA}
960895	960971	-	77	51473215	RT0757	-	^{16 Met tRNA}
1023768	1023844	+	77	51473215	RT0801	-	^{03 Pro tRNA}
1054870	1054946	-	77	51473215	RT0826	-	^{11 Arg tRNA}
1090183	1090265	+	83	51473215	RT0854	-	signal recognition particle RNA (4.5S RNA)
1097820	1097904	-	85	51473215	RT0864	-	^{15 Leu tRNA}
1101995	1102069	-	75	51473215	RT0868	-	^{12 Thr tRNA}