Геном прокариот/Материалы:NC 006274

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Эта статья — часть материалов: лаборатории Биоинформатика, исследовательского проекта «Геном прокариот»

   LOCUS       NC_006274            5300915 bp    DNA     circular BCT 31-JAN-2007
   DEFINITION  Bacillus cereus E33L, complete genome.
   ACCESSION   NC_006274
   VERSION     NC_006274.1  GI:52140164
   KEYWORDS    .
   SOURCE      Bacillus cereus E33L
     ORGANISM  Bacillus cereus E33L
               Bacteria; Firmicutes; Bacillales; Bacillaceae; Bacillus; Bacillus
               cereus group.
   REFERENCE   1  (bases 1 to 5300915)
     AUTHORS   Han,C.S., Xie,G., Challacombe,J.F., Altherr,M.R., Bhotika,S.S.,
               Brown,N., Bruce,D., Campbell,C.S., Campbell,M.L., Chen,J.,
               Chertkov,O., Cleland,C., Dimitrijevic,M., Doggett,N.A.,
               Fawcett,J.J., Glavina,T., Goodwin,L.A., Green,L.D., Hill,K.K.,
               Hitchcock,P., Jackson,P.J., Keim,P., Kewalramani,A.R., Longmire,J.,
               Lucas,S., Malfatti,S., McMurry,K., Meincke,L.J., Misra,M.,
               Moseman,B.L., Mundt,M., Munk,A.C., Okinaka,R.T.,
               Parson-Quintana,B., Reilly,L.P., Richardson,P., Robinson,D.L.,
               Rubin,E., Saunders,E., Tapia,R., Tesmer,J.G., Thayer,N.,
               Thompson,L.S., Tice,H., Ticknor,L.O., Wills,P.L., Brettin,T.S. and
               Gilna,P.
     TITLE     Pathogenomic sequence analysis of Bacillus cereus and Bacillus
               thuringiensis isolates closely related to Bacillus anthracis
     JOURNAL   J. Bacteriol. 188 (9), 3382-3390 (2006)
      PUBMED   16621833
     REMARK    Erratum:[J Bacteriol. 2006 Nov;188(21):7711. Brown, Nancy [added];
               Green, Lance D [added]]
   REFERENCE   2  (bases 1 to 5300915)
     AUTHORS   Brettin,T.S., Bruce,D., Challacombe,J.F., Gilna,P., Han,C.,
               Hill,K., Hitchcock,P., Jackson,P., Keim,P., Longmire,J., Lucas,S.,
               Okinaka,R., Richardson,P., Rubin,E. and Tice,H.
     TITLE     Complete genome sequence of Bacillus cereus E33L
     JOURNAL   Unpublished
   REFERENCE   3  (bases 1 to 5300915)
     CONSRTM   NCBI Genome Project
     TITLE     Direct Submission
     JOURNAL   Submitted (16-SEP-2004) National Center for Biotechnology
               Information, NIH, Bethesda, MD 20894, USA
   REFERENCE   4  (bases 1 to 5300915)
     AUTHORS   Brettin,T.S., Bruce,D., Challacombe,J.F., Gilna,P., Han,C.,
               Hill,K., Hitchcock,P., Jackson,P., Keim,P., Longmire,J., Lucas,S.,
               Okinaka,R., Richardson,P., Rubin,E. and Tice,H.
     TITLE     Direct Submission
     JOURNAL   Submitted (14-JUL-2004) Joint Genome Institute, Department of
               Energy, 2800 Mitchell Drive, Walnut Creek, CA 94598, USA
   COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
               NCBI review. The reference sequence was derived from CP000001.
               COMPLETENESS: full length.

Расположение РНК[править]

Начало	Конец	Направление	Длина	PID	Ген	COG	Комментарий
9337	10846	+	1510	52140164	rRNA-16SrRNA_1	-	16S ribosomal RNA
10993	11072	+	80	52140164	tRNA-Ile-1	-	^{14 Ile tRNA}
11078	11156	+	79	52140164	tRNA-Ala-4	-	^{02 Ala tRNA}
11248	14158	+	2911	52140164	rRNA-23SrRNA_1	-	23S ribosomal RNA
14206	14323	+	118	52140164	rRNA-5SrRNA_1	-	5S ribosomal RNA
21774	21869	+	96	52140164	tRNA-Ser-6	-	^{08 Ser tRNA}
29135	30644	+	1510	52140164	rRNA-16SrRNA_2	-	16S ribosomal RNA
30791	30870	+	80	52140164	tRNA-Ile-2	-	^{14 Ile tRNA}
30876	30954	+	79	52140164	tRNA-Ala-1	-	^{02 Ala tRNA}
31046	33956	+	2911	52140164	rRNA-23SrRNA_2	-	23S ribosomal RNA
34004	34121	+	118	52140164	rRNA-5SrRNA_2	-	5S ribosomal RNA
64432	64508	+	77	52140164	tRNA-Met-6	-	^{16 Met tRNA}
64519	64593	+	75	52140164	tRNA-Glu-6	-	^{04 Glu tRNA}
82456	83958	+	1503	52140164	rRNA-16SrRNA_3	-	16S ribosomal RNA
84141	87051	+	2911	52140164	rRNA-23SrRNA_3	-	23S ribosomal RNA
87099	87216	+	118	52140164	rRNA-5SrRNA_3	-	5S ribosomal RNA
145514	147016	+	1503	52140164	rRNA-16SrRNA_4	-	16S ribosomal RNA
147199	150109	+	2911	52140164	rRNA-23SrRNA_4	-	23S ribosomal RNA
150195	150308	+	114	52140164	rRNA-5SrRNA_4	-	5S ribosomal RNA
150318	150395	+	78	52140164	tRNA-Asn-3	-	^{07 Asn tRNA}
150397	150472	+	76	52140164	tRNA-Thr-3	-	^{12 Thr tRNA}
150494	150571	+	78	52140164	tRNA-Glu-7	-	^{04 Glu tRNA}
150574	150652	+	79	52140164	tRNA-Val-3	-	^{13 Val tRNA}
150667	150753	+	87	52140164	tRNA-Tyr-1	-	^{18 Tyr tRNA}
150816	150893	+	78	52140164	tRNA-Gln-4	-	^{05 Gln tRNA}
150896	150974	+	79	52140164	tRNA-Lys-2	-	^{10 Lys tRNA}
150977	151051	+	75	52140164	tRNA-Gly-6	-	^{01 Gly tRNA}
151059	151134	+	76	52140164	tRNA-Ala-5	-	^{02 Ala tRNA}
248236	248313	+	78	52140164	tRNA-Asn-5	-	^{07 Asn tRNA}
248314	248407	+	94	52140164	tRNA-Ser-4	-	^{08 Ser tRNA}
248413	248490	+	78	52140164	tRNA-Glu-3	-	^{04 Glu tRNA}
248492	248570	+	79	52140164	tRNA-Val-2	-	^{13 Val tRNA}
248614	248692	+	79	52140164	tRNA-Asp-5	-	^{06 Asp tRNA}
248777	248854	+	78	52140164	tRNA-Gln-2	-	^{05 Gln tRNA}
248857	248932	+	76	52140164	tRNA-Lys-3	-	^{10 Lys tRNA}
248946	249034	+	89	52140164	tRNA-Leu-6	-	^{15 Leu tRNA}
249125	249204	+	80	52140164	tRNA-Arg-3	-	^{11 Arg tRNA}
249206	249285	+	80	52140164	tRNA-Pro-1	-	^{03 Pro tRNA}
249284	249357	+	74	52140164	tRNA-Gly-5	-	^{01 Gly tRNA}
249459	250968	+	1510	52140164	rRNA-16SrRNA_5	-	16S ribosomal RNA
251144	254054	+	2911	52140164	rRNA-23SrRNA_5	-	23S ribosomal RNA
254103	254220	+	118	52140164	rRNA-5SrRNA_5	-	5S ribosomal RNA
254230	254309	+	80	52140164	tRNA-Met-8	-	^{16 Met tRNA}
254310	254388	+	79	52140164	tRNA-Asp-1	-	^{06 Asp tRNA}
272048	273557	+	1510	52140164	rRNA-16SrRNA_6	-	16S ribosomal RNA
273733	276643	+	2911	52140164	rRNA-23SrRNA_6	-	23S ribosomal RNA
276691	276808	+	118	52140164	rRNA-5SrRNA_6	-	5S ribosomal RNA
279241	280750	+	1510	52140164	rRNA-16SrRNA_7	-	16S ribosomal RNA
280925	283837	+	2913	52140164	rRNA-23SrRNA_7	-	23S ribosomal RNA
283885	284002	+	118	52140164	rRNA-5SrRNA_7	-	5S ribosomal RNA
286608	288117	+	1510	52140164	rRNA-16SrRNA_8	-	16S ribosomal RNA
288293	291203	+	2911	52140164	rRNA-23SrRNA_8	-	23S ribosomal RNA
291251	291368	+	118	52140164	rRNA-5SrRNA_8	-	5S ribosomal RNA
296724	298233	+	1510	52140164	rRNA-16SrRNA_9	-	16S ribosomal RNA
298408	301319	+	2912	52140164	rRNA-23SrRNA_9	-	23S ribosomal RNA
301367	301484	+	118	52140164	rRNA-5SrRNA_9	-	5S ribosomal RNA
303857	305366	+	1510	52140164	rRNA-16SrRNA_10	-	16S ribosomal RNA
305542	308452	+	2911	52140164	rRNA-23SrRNA_10	-	23S ribosomal RNA
308500	308617	+	118	52140164	rRNA-5SrRNA_10	-	5S ribosomal RNA
514673	516175	+	1503	52140164	rRNA-16SrRNA_11	-	16S ribosomal RNA
516358	519268	+	2911	52140164	rRNA-23SrRNA_11	-	23S ribosomal RNA
519368	519481	+	114	52140164	rRNA-5SrRNA_11	-	5S ribosomal RNA
519490	519567	+	78	52140164	tRNA-Asn-2	-	^{07 Asn tRNA}
519567	519661	+	95	52140164	tRNA-Ser-7	-	^{08 Ser tRNA}
519676	519753	+	78	52140164	tRNA-Glu-2	-	^{04 Glu tRNA}
519756	519834	+	79	52140164	tRNA-Val-5	-	^{13 Val tRNA}
519856	519935	+	80	52140164	tRNA-Met-3	-	^{16 Met tRNA}
519936	520014	+	79	52140164	tRNA-Asp-6	-	^{06 Asp tRNA}
520021	520099	+	79	52140164	tRNA-Phe-1	-	^{17 Phe tRNA}
520115	520193	+	79	52140164	tRNA-Thr-4	-	^{12 Thr tRNA}
520201	520287	+	87	52140164	tRNA-Tyr-2	-	^{18 Tyr tRNA}
520292	520368	+	77	52140164	tRNA-Trp-2	-	^{20 Trp tRNA}
520385	520463	+	79	52140164	tRNA-His-1	-	^{09 His tRNA}
520524	520601	+	78	52140164	tRNA-Gln-1	-	^{05 Gln tRNA}
520604	520681	+	78	52140164	tRNA-Gly-7	-	^{01 Gly tRNA}
520693	520766	+	74	52140164	tRNA-Cys-1	-	^{19 Cys tRNA}
520774	520861	+	88	52140164	tRNA-Leu-1	-	^{15 Leu tRNA}
525247	525323	+	77	52140164	tRNA-Gly-8	-	^{01 Gly tRNA}
731439	732948	+	1510	52140164	rRNA-16SrRNA_12	-	16S ribosomal RNA
733124	736034	+	2911	52140164	rRNA-23SrRNA_12	-	23S ribosomal RNA
736136	736249	+	114	52140164	rRNA-5SrRNA_12	-	5S ribosomal RNA
736255	736333	+	79	52140164	tRNA-Val-6	-	^{13 Val tRNA}
736339	736425	+	87	52140164	tRNA-Tyr-3	-	^{18 Tyr tRNA}
736434	736511	+	78	52140164	tRNA-Gln-3	-	^{05 Gln tRNA}
736513	736591	+	79	52140164	tRNA-Lys-5	-	^{10 Lys tRNA}
736603	736686	+	84	52140164	tRNA-Leu-2	-	^{15 Leu tRNA}
736713	736790	+	78	52140164	tRNA-Gly-2	-	^{01 Gly tRNA}
736804	736895	+	92	52140164	tRNA-Leu-5	-	^{15 Leu tRNA}
736896	736972	+	77	52140164	tRNA-Arg-5	-	^{11 Arg tRNA}
736980	737056	+	77	52140164	tRNA-Pro-2	-	^{03 Pro tRNA}
737070	737145	+	76	52140164	tRNA-Ala-3	-	^{02 Ala tRNA}
737163	737258	+	96	52140164	tRNA-Ser-2	-	^{08 Ser tRNA}
737310	737405	+	96	52140164	tRNA-Ser-3	-	^{08 Ser tRNA}
737423	737502	+	80	52140164	tRNA-Met-2	-	^{16 Met tRNA}
737504	737582	+	79	52140164	tRNA-Asp-3	-	^{06 Asp tRNA}
737588	737666	+	79	52140164	tRNA-Phe-3	-	^{17 Phe tRNA}
737673	737748	+	76	52140164	tRNA-Thr-2	-	^{12 Thr tRNA}
737752	737825	+	74	52140164	tRNA-Trp-1	-	^{20 Trp tRNA}
737836	737915	+	80	52140164	tRNA-Ile-4	-	^{14 Ile tRNA}
737921	737998	+	78	52140164	tRNA-Asn-4	-	^{07 Asn tRNA}
737997	738071	+	75	52140164	tRNA-Glu-5	-	^{04 Glu tRNA}
1267927	1268002	-	76	52140164	tRNA-Val-4	-	^{13 Val tRNA}
4136773	4136849	-	77	52140164	tRNA-Met-1	-	^{16 Met tRNA}
4343403	4343482	-	80	52140164	tRNA-Arg-4	-	^{11 Arg tRNA}
4343481	4343557	-	77	52140164	tRNA-Gly-4	-	^{01 Gly tRNA}
4721151	4721225	-	75	52140164	tRNA-Glu-1	-	^{04 Glu tRNA}
4721229	4721322	-	94	52140164	tRNA-Ser-1	-	^{08 Ser tRNA}
4721327	4721404	-	78	52140164	tRNA-Asn-1	-	^{07 Asn tRNA}
4721409	4721488	-	80	52140164	tRNA-Ile-3	-	^{14 Ile tRNA}
4721496	4721569	-	74	52140164	tRNA-Gly-1	-	^{01 Gly tRNA}
4721580	4721658	-	79	52140164	tRNA-Lys-4	-	^{10 Lys tRNA}
4721666	4721744	-	79	52140164	tRNA-Thr-5	-	^{12 Thr tRNA}
4721756	4721834	-	79	52140164	tRNA-Phe-4	-	^{17 Phe tRNA}
4721844	4721922	-	79	52140164	tRNA-Asp-2	-	^{06 Asp tRNA}
4721921	4722000	-	80	52140164	tRNA-Met-5	-	^{16 Met tRNA}
4722025	4722120	-	96	52140164	tRNA-Ser-5	-	^{08 Ser tRNA}
4722135	4722214	-	80	52140164	tRNA-Met-4	-	^{16 Met tRNA}
4722216	4722295	-	80	52140164	tRNA-Met-7	-	^{16 Met tRNA}
4722313	4722388	-	76	52140164	tRNA-Ala-2	-	^{02 Ala tRNA}
4722402	4722478	-	77	52140164	tRNA-Pro-3	-	^{03 Pro tRNA}
4722486	4722562	-	77	52140164	tRNA-Arg-1	-	^{11 Arg tRNA}
4722563	4722654	-	92	52140164	tRNA-Leu-3	-	^{15 Leu tRNA}
4722668	4722745	-	78	52140164	tRNA-Gly-3	-	^{01 Gly tRNA}
4722772	4722855	-	84	52140164	tRNA-Leu-4	-	^{15 Leu tRNA}
4722875	4722953	-	79	52140164	tRNA-His-2	-	^{09 His tRNA}
4722960	4723038	-	79	52140164	tRNA-Thr-1	-	^{12 Thr tRNA}
4723040	4723118	-	79	52140164	tRNA-Val-1	-	^{13 Val tRNA}
4723122	4723237	-	116	52140164	rRNA-5SrRNA_13	-	5S ribosomal RNA
4723337	4726247	-	2911	52140164	rRNA-23SrRNA_13	-	23S ribosomal RNA
4726430	4727932	-	1503	52140164	rRNA-16SrRNA_13	-	16S ribosomal RNA
4929779	4929857	-	79	52140164	tRNA-Arg-2	-	^{11 Arg tRNA}
5280291	5280366	-	76	52140164	tRNA-Phe-2	-	^{17 Phe tRNA}
5280405	5280483	-	79	52140164	tRNA-Asp-4	-	^{06 Asp tRNA}
5280503	5280577	-	75	52140164	tRNA-Glu-4	-	^{04 Glu tRNA}
5280588	5280666	-	79	52140164	tRNA-Lys-1	-	^{10 Lys tRNA}