Геном прокариот/Материалы:NC 006831

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Эта статья — часть материалов: лаборатории Биоинформатика, исследовательского проекта «Геном прокариот»

   LOCUS       NC_006831            1499920 bp    DNA     circular BCT 23-MAY-2006
   DEFINITION  Ehrlichia ruminantium str. Gardel, complete genome.
   ACCESSION   NC_006831
   VERSION     NC_006831.1  GI:58616727
   KEYWORDS    complete genome.
   SOURCE      Ehrlichia ruminantium str. Gardel
     ORGANISM  Ehrlichia ruminantium str. Gardel
               Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales;
               Anaplasmataceae; Ehrlichia.
   REFERENCE   1  (bases 1 to 1499920)
     AUTHORS   Frutos,R., Viari,A., Ferraz,C., Morgat,A., Eychenie,S.,
               Kandassamy,Y., Chantal,I., Bensaid,A., Coissac,E., Vachiery,N.,
               Demaille,J. and Martinez,D.
     TITLE     Comparative genomic analysis of three strains of Ehrlichia
               ruminantium reveals an active process of genome size plasticity
     JOURNAL   Nucleic Acids Res. 188 (7), 2533-2542 (2006)
      PUBMED   16547041
   REFERENCE   2  (bases 1 to 1499920)
     AUTHORS   .
     CONSRTM   NCBI Genome Project
     TITLE     Direct Submission
     JOURNAL   Submitted (04-FEB-2005) National Center for Biotechnology
               Information, NIH, Bethesda, MD 20894, USA
   REFERENCE   3  (bases 1 to 1499920)
     AUTHORS   Frutos,R., Ferraz,C., Bensaid,A., Eychenie,S., Kandassami,Y.,
               Chantal,I., Morgat,A., Coissac,E., Vachiery,N., Demaille,J.,
               Viari,A. and Martinez,D.
     TITLE     Direct Submission
     JOURNAL   Submitted (25-NOV-2004) Cirad-Emvt, TA 30/G, Campus International
               de Baillarguet, Montpellier Cedex 5 34398, France
   COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
               NCBI review. The reference sequence was derived from CR925677.
               COMPLETENESS: full length.

Расположение РНК[править]

Начало	Конец	Направление	Длина	PID	Ген	COG	Комментарий
19772	19861	-	90	58616727	ERGA_TRNA_00010	-	^{15 Leu tRNA}
44747	44823	+	77	58616727	ERGA_TRNA_00020	-	^{13 Val tRNA}
70461	70536	+	76	58616727	ERGA_TRNA_00030	-	^{10 Lys tRNA}
76885	76960	-	76	58616727	ERGA_TRNA_00040	-	^{19 Cys tRNA}
154033	154123	-	91	58616727	ERGA_TRNA_00050	-	^{15 Leu tRNA}
168152	168230	+	79	58616727	ERGA_TRNA_00060	-	^{03 Pro tRNA}
168925	169015	-	91	58616727	ERGA_TRNA_00070	-	^{08 Ser tRNA}
201173	201248	+	76	58616727	ERGA_TRNA_00080	-	^{02 Ala tRNA}
261666	261742	+	77	58616727	ERGA_TRNA_00090	-	^{20 Trp tRNA}
275201	275277	+	77	58616727	ERGA_TRNA_00100	-	^{11 Arg tRNA}
303748	305256	+	1509	58616727	ERGA_RRNA_16S	-	ribosomal RNA-16S
311360	311445	-	86	58616727	ERGA_TRNA_00110	-	^{15 Leu tRNA}
318028	318103	+	76	58616727	ERGA_TRNA_00120	-	^{10 Lys tRNA}
318293	318377	+	85	58616727	ERGA_TRNA_00130	-	^{15 Leu tRNA}
325224	325300	+	77	58616727	ERGA_TRNA_00140	-	^{16 Met tRNA}
401136	401211	+	76	58616727	ERGA_TRNA_00150	-	^{01 Gly tRNA}
482400	482476	+	77	58616727	ERGA_TRNA_00160	-	^{06 Asp tRNA}
570903	570978	-	76	58616727	ERGA_TRNA_00170	-	^{07 Asn tRNA}
575542	575617	-	76	58616727	ERGA_TRNA_00180	-	^{17 Phe tRNA}
586750	586826	-	77	58616727	ERGA_TRNA_00190	-	^{11 Arg tRNA}
635325	635402	+	78	58616727	ERGA_TRNA_00200	-	^{16 Met tRNA}
648529	648605	+	77	58616727	ERGA_TRNA_00210	-	^{16 Met tRNA}
664574	664665	+	92	58616727	ERGA_TRNA_00220	-	^{08 Ser tRNA}
682642	682718	+	77	58616727	ERGA_TRNA_00230	-	^{12 Thr tRNA}
721223	721296	-	74	58616727	ERGA_TRNA_00240	-	^{12 Thr tRNA}
763779	763865	-	87	58616727	ERGA_TRNA_00250	-	^{15 Leu tRNA}
798963	799039	-	77	58616727	ERGA_TRNA_00260	-	^{14 Ile tRNA}
817103	817179	-	77	58616727	ERGA_TRNA_00270	-	^{03 Pro tRNA}
880166	880241	-	76	58616727	ERGA_TRNA_00280	-	^{11 Arg tRNA}
949607	949682	-	76	58616727	ERGA_TRNA_00290	-	^{04 Glu tRNA}
995776	995849	-	74	58616727	ERGA_TRNA_00300	-	^{01 Gly tRNA}
995855	995940	-	86	58616727	ERGA_TRNA_00310	-	^{18 Tyr tRNA}
1107804	1107879	-	76	58616727	ERGA_TRNA_00320	-	^{13 Val tRNA}
1249242	1249341	-	100	58616727	ERGA_RRNA_5S	-	ribosomal RNA-5S
1249429	1252193	-	2765	58616727	ERGA_RRNA_23S	-	ribosomal RNA-23S
1268728	1268804	-	77	58616727	ERGA_TRNA_00330	-	^{09 His tRNA}
1408349	1408438	+	90	58616727	ERGA_TRNA_00340	-	^{08 Ser tRNA}
1491965	1492041	+	77	58616727	ERGA_TRNA_00350	-	^{11 Arg tRNA}
1495392	1495466	-	75	58616727	ERGA_TRNA_00360	-	^{05 Gln tRNA}