Геном прокариот/Материалы:NC 007350
(перенаправлено с «Материалы:NC 007350»)
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Базовый уровень статей |
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LOCUS NC_007350 2516575 bp DNA circular BCT 27-AUG-2007
DEFINITION Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305,
complete genome.
ACCESSION NC_007350
VERSION NC_007350.1 GI:73661309
KEYWORDS .
SOURCE Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305
ORGANISM Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305
Bacteria; Firmicutes; Bacillales; Staphylococcus.
REFERENCE 1
AUTHORS Kuroda,M., Yamashita,A., Hirakawa,H., Kumano,M., Morikawa,K.,
Higashide,M., Maruyama,A., Inose,Y., Matoba,K., Toh,H., Kuhara,S.,
Hattori,M. and Ohta,T.
TITLE Whole genome sequence of Staphylococcus saprophyticus reveals the
pathogenesis of uncomplicated urinary tract infection
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 102 (37), 13272-13277 (2005)
PUBMED 16135568
REFERENCE 2 (bases 1 to 2516575)
CONSRTM NCBI Genome Project
TITLE Direct Submission
JOURNAL Submitted (20-AUG-2005) National Center for Biotechnology
Information, NIH, Bethesda, MD 20894, USA
REFERENCE 3 (bases 1 to 2516575)
AUTHORS Hattori,M., Yamashita,A., Toh,H., Oshima,K. and Shiba,T.
TITLE Direct Submission
JOURNAL Submitted (11-MAR-2005) Masahira Hattori, Kitasato Institute for
Life Sciences; 1-15-1 Kitasato, Sagamihara, Kanagawa, 228-0829,
Japan (E-mail:hattori@genome.ls.kitasato-u.ac.jp,
URL:http://genome.ls.kitasato-u.ac.jp, Tel:81-42-778-8194)
COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final
NCBI review. The reference sequence was derived from AP008934.
This work was done in collaboration with Makoto Kuroda, Miyuki
Kumano, Kazuya Morikawa, Masato Higashide, Atsushi Maruyama, Yumiko
Inoue, Kimio Matoba, Toshiko Ohta (University of Tsukuba), Hideki
Hirakawa, Satoru Kuhara (Kyushu University), and supported by the
Research for the Future Program of the Japan Society for the
Promotion of Science.
COMPLETENESS: full length.
Расположение РНК
[править]| Начало | Конец | Направление | Длина | PID | Ген | COG | Комментарий |
|---|---|---|---|---|---|---|---|
| 25017 | 25091 | + | 75 | 73661309 | SSPt01 | - | 04 Glu tRNA |
| 25098 | 25170 | + | 73 | 73661309 | SSPt02 | - | 06 Asp tRNA |
| 743718 | 745270 | + | 1553 | 73661309 | SSPr01 | - | 16S ribosomal RNA |
| 745554 | 748476 | + | 2923 | 73661309 | SSPr02 | - | 23S ribosomal RNA |
| 748555 | 748672 | + | 118 | 73661309 | SSPr03 | - | 5S ribosomal RNA |
| 748681 | 748755 | + | 75 | 73661309 | SSPt03 | - | 07 Asn tRNA |
| 748760 | 748831 | + | 72 | 73661309 | SSPt04 | - | 04 Glu tRNA |
| 748841 | 748916 | + | 76 | 73661309 | SSPt05 | - | 13 Val tRNA |
| 748935 | 749018 | + | 84 | 73661309 | SSPt06 | - | 18 Tyr tRNA |
| 749023 | 749097 | + | 75 | 73661309 | SSPt07 | - | 05 Gln tRNA |
| 749101 | 749173 | + | 73 | 73661309 | SSPt08 | - | 10 Lys tRNA |
| 841386 | 841471 | + | 86 | 73661309 | SSPt09 | - | 15 Leu tRNA |
| 841494 | 841567 | + | 74 | 73661309 | SSPt10 | - | 01 Gly tRNA |
| 841712 | 843264 | + | 1553 | 73661309 | SSPr04 | - | 16S ribosomal RNA |
| 843547 | 846469 | + | 2923 | 73661309 | SSPr05 | - | 23S ribosomal RNA |
| 846548 | 846665 | + | 118 | 73661309 | SSPr06 | - | 5S ribosomal RNA |
| 846904 | 847017 | + | 114 | 73661309 | SSPr07 | - | 5S ribosomal RNA |
| 959625 | 961177 | + | 1553 | 73661309 | SSPr08 | - | 16S ribosomal RNA |
| 961276 | 961352 | + | 77 | 73661309 | SSPt11 | - | 14 Ile tRNA |
| 961374 | 961449 | + | 76 | 73661309 | SSPt12 | - | 02 Ala tRNA |
| 961643 | 964565 | + | 2923 | 73661309 | SSPr09 | - | 23S ribosomal RNA |
| 964644 | 964761 | + | 118 | 73661309 | SSPr10 | - | 5S ribosomal RNA |
| 964768 | 964843 | + | 76 | 73661309 | SSPt13 | - | 13 Val tRNA |
| 964857 | 964932 | + | 76 | 73661309 | SSPt14 | - | 12 Thr tRNA |
| 964940 | 965015 | + | 76 | 73661309 | SSPt15 | - | 10 Lys tRNA |
| 965032 | 965113 | + | 82 | 73661309 | SSPt16 | - | 15 Leu tRNA |
| 965117 | 965191 | + | 75 | 73661309 | SSPt17 | - | 01 Gly tRNA |
| 965199 | 965287 | + | 89 | 73661309 | SSPt18 | - | 15 Leu tRNA |
| 965303 | 965379 | + | 77 | 73661309 | SSPt19 | - | 11 Arg tRNA |
| 965385 | 965458 | + | 74 | 73661309 | SSPt20 | - | 03 Pro tRNA |
| 965479 | 965554 | + | 76 | 73661309 | SSPt21 | - | 02 Ala tRNA |
| 965580 | 965656 | + | 77 | 73661309 | SSPt22 | - | 16 Met tRNA |
| 965681 | 965754 | + | 74 | 73661309 | SSPt23 | - | 16 Met tRNA |
| 965764 | 965856 | + | 93 | 73661309 | SSPt24 | - | 08 Ser tRNA |
| 965901 | 965993 | + | 93 | 73661309 | SSPt25 | - | 08 Ser tRNA |
| 966007 | 966080 | + | 74 | 73661309 | SSPt26 | - | 16 Met tRNA |
| 966090 | 966165 | + | 76 | 73661309 | SSPt27 | - | 06 Asp tRNA |
| 966174 | 966246 | + | 73 | 73661309 | SSPt28 | - | 17 Phe tRNA |
| 966259 | 966334 | + | 76 | 73661309 | SSPt29 | - | 12 Thr tRNA |
| 966343 | 966426 | + | 84 | 73661309 | SSPt30 | - | 18 Tyr tRNA |
| 966442 | 966515 | + | 74 | 73661309 | SSPt31 | - | 20 Trp tRNA |
| 966518 | 966590 | + | 73 | 73661309 | SSPt32 | - | 09 His tRNA |
| 966602 | 966673 | + | 72 | 73661309 | SSPt33 | - | 05 Gln tRNA |
| 966683 | 966756 | + | 74 | 73661309 | SSPt34 | - | 19 Cys tRNA |
| 966764 | 966838 | + | 75 | 73661309 | SSPt35 | - | Xaa tRNA |
| 966860 | 966934 | + | 75 | 73661309 | SSPt36 | - | Xaa tRNA |
| 966944 | 967018 | + | 75 | 73661309 | SSPt37 | - | 01 Gly tRNA |
| 967916 | 967998 | + | 83 | 73661309 | SSPt38 | - | 15 Leu tRNA |
| 1003701 | 1003774 | + | 74 | 73661309 | SSPt39 | - | 16 Met tRNA |
| 1003786 | 1003861 | + | 76 | 73661309 | SSPt40 | - | 06 Asp tRNA |
| 1003872 | 1003944 | + | 73 | 73661309 | SSPt41 | - | 17 Phe tRNA |
| 1003967 | 1004042 | + | 76 | 73661309 | SSPt42 | - | 09 His tRNA |
| 1004056 | 1004129 | + | 74 | 73661309 | SSPt43 | - | 01 Gly tRNA |
| 1004140 | 1004214 | + | 75 | 73661309 | SSPt44 | - | 07 Asn tRNA |
| 1004216 | 1004287 | + | 72 | 73661309 | SSPt45 | - | 04 Glu tRNA |
| 1004327 | 1004418 | + | 92 | 73661309 | SSPt46 | - | 08 Ser tRNA |
| 1707942 | 1708018 | - | 77 | 73661309 | SSPt47 | - | 11 Arg tRNA |
| 1825919 | 1826007 | - | 89 | 73661309 | SSPt48 | - | 08 Ser tRNA |
| 1826010 | 1826084 | - | 75 | 73661309 | SSPt49 | - | 07 Asn tRNA |
| 1972295 | 1972655 | - | 361 | 73661309 | SSPt50 | - | tmRNA |
| 1989208 | 1989279 | + | 72 | 73661309 | SSPt51 | - | 11 Arg tRNA |
| 2301248 | 2301365 | - | 118 | 73661309 | SSPr11 | - | 5S ribosomal RNA |
| 2301444 | 2304366 | - | 2923 | 73661309 | SSPr12 | - | 23S ribosomal RNA |
| 2304649 | 2306201 | - | 1553 | 73661309 | SSPr13 | - | 16S ribosomal RNA |
| 2306446 | 2306563 | - | 118 | 73661309 | SSPr14 | - | 5S ribosomal RNA |
| 2306642 | 2309564 | - | 2923 | 73661309 | SSPr15 | - | 23S ribosomal RNA |
| 2309753 | 2309829 | - | 77 | 73661309 | SSPt52 | - | 14 Ile tRNA |
| 2309927 | 2311479 | - | 1553 | 73661309 | SSPr16 | - | 16S ribosomal RNA |
| 2311632 | 2311707 | - | 76 | 73661309 | SSPt53 | - | 02 Ala tRNA |
| 2311727 | 2311800 | - | 74 | 73661309 | SSPt54 | - | 03 Pro tRNA |
| 2311828 | 2311904 | - | 77 | 73661309 | SSPt55 | - | 11 Arg tRNA |
| 2311918 | 2312006 | - | 89 | 73661309 | SSPt56 | - | 15 Leu tRNA |
| 2312015 | 2312089 | - | 75 | 73661309 | SSPt57 | - | 01 Gly tRNA |
| 2312104 | 2312176 | - | 73 | 73661309 | SSPt58 | - | 10 Lys tRNA |
| 2312183 | 2312258 | - | 76 | 73661309 | SSPt59 | - | 12 Thr tRNA |
| 2312272 | 2312347 | - | 76 | 73661309 | SSPt60 | - | 13 Val tRNA |
| 2312369 | 2312486 | - | 118 | 73661309 | SSPr17 | - | 5S ribosomal RNA |
| 2350131 | 2350248 | - | 118 | 73661309 | SSPr18 | - | 5S ribosomal RNA |
| 2350327 | 2353249 | - | 2923 | 73661309 | SSPr19 | - | 23S ribosomal RNA |
| 2353532 | 2355084 | - | 1553 | 73661309 | SSPr20 | - | 16S ribosomal RNA |
| 2363772 | 2363864 | - | 93 | 73661309 | SSPt61 | - | 08 Ser tRNA |