Геном прокариот/Материалы:NC 007511

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Эта статья — часть материалов: лаборатории Биоинформатика, исследовательского проекта «Геном прокариот»

   LOCUS       NC_007511            3587082 bp    DNA     circular BCT 03-APR-2006
   DEFINITION  Burkholderia sp. 383 chromosome 2, complete sequence.
   ACCESSION   NC_007511
   VERSION     NC_007511.1  GI:78060853
   KEYWORDS    .
   SOURCE      Burkholderia sp. 383
     ORGANISM  Burkholderia sp. 383
               Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales;
               Burkholderiaceae; Burkholderia; Burkholderia cepacia complex.
   REFERENCE   1  (bases 1 to 3587082)
     AUTHORS   Copeland,A., Lucas,S., Lapidus,A., Barry,K., Detter,J.C.,
               Glavina,T., Hammon,N., Israni,S., Pitluck,S., Chain,P.,
               Malfatti,S., Shin,M., Vergez,L., Schmutz,J., Larimer,F., Land,M.,
               Kyrpides,N., Lykidis,A. and Richardson,P.
     CONSRTM   US DOE Joint Genome Institute
     TITLE     Complete sequence of chromosome 2 of Burkholderia sp. 383
     JOURNAL   Unpublished
   REFERENCE   2  (bases 1 to 3587082)
     AUTHORS   .
     CONSRTM   NCBI Genome Project
     TITLE     Direct Submission
     JOURNAL   Submitted (24-OCT-2005) National Center for Biotechnology
               Information, NIH, Bethesda, MD 20894, USA
   REFERENCE   3  (bases 1 to 3587082)
     AUTHORS   Copeland,A., Lucas,S., Lapidus,A., Barry,K., Detter,J.C.,
               Glavina,T., Hammon,N., Israni,S., Pitluck,S., Chain,P.,
               Malfatti,S., Shin,M., Vergez,L., Schmutz,J., Larimer,F., Land,M.,
               Kyrpides,N., Lykidis,A. and Richardson,P.
     CONSRTM   US DOE Joint Genome Institute
     TITLE     Direct Submission
     JOURNAL   Submitted (11-OCT-2005) US DOE Joint Genome Institute, 2400
               Mitchell Drive B100, Walnut Creek, CA 94598-1698, USA
   COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
               NCBI review. The reference sequence was derived from CP000152.
               URL -- http://www.jgi.doe.gov
               Source DNA and bacteria available from Jim Tiedje
               (tiedjej@pilot.msu.edu)
               Whole genome sequencing and draft assembly at JGI-PGF
               Finishing done by JGI-LLNL
               Quality assurance done by JGI-Stanford
               Annotation done by JGI-ORNL and JGI-PGF
               Contacts: Paul Richardson (microbes@cuba.jgi-psf.org)
               Finished microbial genomes have been curated to close all gaps with
               greater than 98% coverage of at least two independent clones. Each
               base pair has a minimum q (quality) value of 30 and the total error
               rate is less than one per 50000.
               COMPLETENESS: full length.

Расположение РНК[править]

Начало	Конец	Направление	Длина	PID	Ген	COG	Комментарий
380393	381872	+	1480	78060853	Bcep18194_BR0001	-	16S ribosomal RNA
381936	382009	+	74	78060853	Bcep18194_BR0002	-	^{14 Ile tRNA}
382054	382126	+	73	78060853	Bcep18194_BR0003	-	^{02 Ala tRNA}
382423	385304	+	2882	78060853	Bcep18194_BR0004	-	23S ribosomal RNA
385436	385548	+	113	78060853	Bcep18194_BR0005	-	5S ribosomal RNA
785243	785324	-	82	78060853	Bcep18194_BR0006	-	^{15 Leu tRNA}
2524589	2524661	-	73	78060853	Bcep18194_BR0007	-	^{16 Met tRNA}
2751210	2751282	+	73	78060853	Bcep18194_BR0008	-	^{19 Cys tRNA}