Геном прокариот/Материалы:NC 007614

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   LOCUS       NC_007614            3184243 bp    DNA     circular BCT 31-MAR-2006
   DEFINITION  Nitrosospira multiformis ATCC 25196 chromosome 1, complete
               sequence.
   ACCESSION   NC_007614
   VERSION     NC_007614.1  GI:82701135
   KEYWORDS    .
   SOURCE      Nitrosospira multiformis ATCC 25196
     ORGANISM  Nitrosospira multiformis ATCC 25196
               Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales;
               Nitrosomonadaceae; Nitrosospira.
   REFERENCE   1  (bases 1 to 3184243)
     AUTHORS   Copeland,A., Lucas,S., Lapidus,A., Barry,K., Detter,J.C.,
               Glavina,T., Hammon,N., Israni,S., Pitluck,S., Chain,P.,
               Malfatti,S., Shin,M., Vergez,L., Schmutz,J., Larimer,F., Land,M.,
               Hauser,L., Kyrpides,N., Lykidis,A. and Richardson,P.
     CONSRTM   US DOE Joint Genome Institute
     TITLE     Complete sequence of Chromosome 1 of Nitrosospira multiformis ATCC
               25196
     JOURNAL   Unpublished
   REFERENCE   2  (bases 1 to 3184243)
     CONSRTM   NCBI Genome Project
     TITLE     Direct Submission
     JOURNAL   Submitted (23-NOV-2005) National Center for Biotechnology
               Information, NIH, Bethesda, MD 20894, USA
   REFERENCE   3  (bases 1 to 3184243)
     AUTHORS   Copeland,A., Lucas,S., Lapidus,A., Barry,K., Detter,J.C.,
               Glavina,T., Hammon,N., Israni,S., Pitluck,S., Chain,P.,
               Malfatti,S., Shin,M., Vergez,L., Schmutz,J., Larimer,F., Land,M.,
               Hauser,L., Lykidis,A. and Richardson,P.
     CONSRTM   US DOE Joint Genome Institute
     TITLE     Direct Submission
     JOURNAL   Submitted (08-AUG-2005) US DOE Joint Genome Institute, 2800
               Mitchell Drive B100, Walnut Creek, CA 94598-1698, USA
   COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
               NCBI review. The reference sequence was derived from CP000103.
               URL -- http://www.jgi.doe.gov
               Source DNA available from Dan Arp (arpd@bcc.orst.edu)
               Bacteria available from ATCC: ATCC 25196
               Whole genome sequencing and draft assembly at JGI-PGF
               Finishing done by JGI-LLNL
               Quality assurance done by JGI-Stanford
               Annotation done by JGI-ORNL and JGI-PGF
               Contacts: Paul Richardson (microbes@cuba.jgi-psf.org)
               Finished microbial genomes have been curated to close all gaps with
               greater than 98% coverage of at least two independent clones. Each
               base pair has a minimum q (quality) value of 30 and the total error
               rate is less than one per 50000.
               COMPLETENESS: full length.


Расположение РНК[править]

Начало Конец Направление Длина PID Ген COG Комментарий
27371 27446 + 76 82701135 Nmul_AR0001 - 11 Arg tRNA
80715 80788 + 74 82701135 Nmul_AR0002 - 01 Gly tRNA
142086 142161 + 76 82701135 Nmul_AR0003 - 02 Ala tRNA
155336 155411 + 76 82701135 Nmul_AR0004 - 10 Lys tRNA
218904 218980 - 77 82701135 Nmul_AR0005 - 11 Arg tRNA
241013 241249 - 237 82701135 Nmul_AR0006 - RNA component of RNaseP
253129 253205 + 77 82701135 Nmul_AR0007 - 03 Pro tRNA
253241 253317 + 77 82701135 Nmul_AR0008 - 11 Arg tRNA
253378 253452 + 75 82701135 Nmul_AR0009 - 09 His tRNA
285113 285189 - 77 82701135 Nmul_AR0010 - 13 Val tRNA
553914 553990 + 77 82701135 Nmul_AR0011 - 03 Pro tRNA
562629 564157 + 1529 82701135 Nmul_AR0012 - 16S ribosomal RNA
564282 564358 + 77 82701135 Nmul_AR0013 - 14 Ile tRNA
564366 564441 + 76 82701135 Nmul_AR0014 - 02 Ala tRNA
564814 567702 + 2889 82701135 Nmul_AR0015 - 23S ribosomal RNA
567825 567942 + 118 82701135 Nmul_AR0016 - 5S ribosomal RNA
673637 673711 + 75 82701135 Nmul_AR0017 - 05 Gln tRNA
874636 874720 + 85 82701135 Nmul_AR0018 - 18 Tyr tRNA
874898 874971 + 74 82701135 Nmul_AR0019 - 01 Gly tRNA
875060 875134 + 75 82701135 Nmul_AR0020 - 12 Thr tRNA
876463 876538 + 76 82701135 Nmul_AR0021 - 20 Trp tRNA
1082394 1082485 - 92 82701135 Nmul_AR0022 - 08 Ser tRNA
1162686 1162761 - 76 82701135 Nmul_AR0023 - 12 Thr tRNA
1257731 1257815 + 85 82701135 Nmul_AR0024 - 15 Leu tRNA
1464533 1464607 + 75 82701135 Nmul_AR0025 - 01 Gly tRNA
1464755 1464828 + 74 82701135 Nmul_AR0026 - 19 Cys tRNA
1488892 1488980 + 89 82701135 Nmul_AR0027 - 15 Leu tRNA
1838011 1838086 - 76 82701135 Nmul_AR0028 - 04 Glu tRNA
1838145 1838220 - 76 82701135 Nmul_AR0029 - 02 Ala tRNA
1840080 1840154 + 75 82701135 Nmul_AR0030 - 13 Val tRNA
1935662 1935737 - 76 82701135 Nmul_AR0031 - 07 Asn tRNA
2074756 2074832 - 77 82701135 Nmul_AR0032 - 03 Pro tRNA
2142335 2142438 - 104 82701135 Nmul_AR0033 - 4.5S ribosomal RNA component of signal recognition particle (SRP)
2144593 2144669 - 77 82701135 Nmul_AR0034 - 16 Met tRNA
2232983 2233075 - 93 82701135 Nmul_AR0035 - 08 Ser tRNA
2244919 2245005 + 87 82701135 Nmul_AR0036 - 15 Leu tRNA
2261847 2261923 + 77 82701135 Nmul_AR0037 - 11 Arg tRNA
2348630 2348706 - 77 82701135 Nmul_AR0038 - 16 Met tRNA
2480674 2481035 - 362 82701135 Nmul_AR0039 - tmRNA
2514714 2514801 - 88 82701135 Nmul_AR0040 - 08 Ser tRNA
2628672 2628764 - 93 82701135 Nmul_AR0041 - 08 Ser tRNA
2662578 2662654 - 77 82701135 Nmul_AR0042 - 06 Asp tRNA
2662667 2662742 - 76 82701135 Nmul_AR0043 - 13 Val tRNA
2669090 2669174 - 85 82701135 Nmul_AR0044 - 15 Leu tRNA
2769529 2769615 + 87 82701135 Nmul_AR0045 - 15 Leu tRNA
2791773 2791848 - 76 82701135 Nmul_AR0046 - 16 Met tRNA
3043258 3043333 - 76 82701135 Nmul_AR0047 - 17 Phe tRNA
3123890 3123965 + 76 82701135 Nmul_AR0048 - 10 Lys tRNA
3157579 3157654 + 76 82701135 Nmul_AR0049 - 12 Thr tRNA