Геном прокариот/Материалы:NC 007929

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   LOCUS       NC_007929            1827111 bp    DNA     circular BCT 03-MAY-2006
   DEFINITION  Lactobacillus salivarius subsp. salivarius UCC118, complete genome.
   ACCESSION   NC_007929
   VERSION     NC_007929.1  GI:90960990
   KEYWORDS    .
   SOURCE      Lactobacillus salivarius subsp. salivarius UCC118
     ORGANISM  Lactobacillus salivarius subsp. salivarius UCC118
               Bacteria; Firmicutes; Lactobacillales; Lactobacillaceae;
               Lactobacillus.
   REFERENCE   1  (bases 1 to 1827111)
     AUTHORS   Claesson,M.J., Li,Y., Leahy,S., Canchaya,C., van Pijkeren,J.P.,
               Cerdeno-Tarraga,A.M., Parkhill,J., Flynn,S., O'sullivan,G.C.,
               Collins,J.K., Higgins,D., Shanahan,F., Fitzgerald,G.F., van
               Sinderen,D. and O'toole,P.W.
     TITLE     From the Cover: Multireplicon genome architecture of Lactobacillus
               salivarius
     JOURNAL   Proc. Natl. Acad. Sci. U.S.A. 103 (17), 6718-6723 (2006)
      PUBMED   16617113
   REFERENCE   2  (bases 1 to 1827111)
     CONSRTM   NCBI Genome Project
     TITLE     Direct Submission
     JOURNAL   Submitted (01-APR-2006) National Center for Biotechnology
               Information, NIH, Bethesda, MD 20894, USA
   REFERENCE   3  (bases 1 to 1827111)
     AUTHORS   Claesson,M.J., Li,Y., Leahy,S., Canchaya,C., van Pijkeren,J.P.,
               Cerdeno-Tarraga,A.M., Parkhill,J., Flynn,S., O'Sullivan,G.C.,
               Collins,J.K., Higgins,D.G., Shanahan,F., Fitzgerald,G.F., van
               Sinderen,D. and O'Toole,P.W.
     CONSRTM   Alimentary Pharmabiotic Centre, University College Cork
     TITLE     Direct Submission
     JOURNAL   Submitted (16-DEC-2005) Department of Microbiology, Alimentary
               Pharmabiotic Centre, University College Cork, College Road, Cork,
               Ireland
   COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
               NCBI review. The reference sequence was derived from CP000233.
               COMPLETENESS: full length.
               Source DNA is available from Eva McArdle at Alimentary Pharmabiotic
               Centre (e.mcardle@ucc.ie).


Расположение РНК[править]

Начало Конец Направление Длина PID Ген COG Комментарий
74540 76056 + 1517 90960990 LSL_RNA001 - 16S ribosomal RNA
76070 79029 + 2960 90960990 LSL_RNA002 - 23S ribosomal RNA
79274 79390 + 117 90960990 LSL_RNA003 - 5S ribosomal RNA
217778 219294 + 1517 90960990 LSL_RNA004 - 16S ribosomal RNA
219398 219472 + 75 90960990 LSL_RNA119 - 14 Ile tRNA
219504 219576 + 73 90960990 LSL_RNA120 - 02 Ala tRNA
219703 222482 + 2780 90960990 LSL_RNA007 - 23S ribosomal RNA
222727 222843 + 117 90960990 LSL_RNA008 - 5S ribosomal RNA
222849 222921 + 73 90960990 LSL_RNA009 - 13 Val tRNA
222925 222997 + 73 90960990 LSL_RNA010 - 10 Lys tRNA
223013 223098 + 86 90960990 LSL_RNA011 - 15 Leu tRNA
223107 223179 + 73 90960990 LSL_RNA012 - 12 Thr tRNA
223184 223255 + 72 90960990 LSL_RNA013 - 01 Gly tRNA
223265 223350 + 86 90960990 LSL_RNA014 - 15 Leu tRNA
223359 223432 + 74 90960990 LSL_RNA015 - 11 Arg tRNA
223480 223553 + 74 90960990 LSL_RNA016 - 11 Arg tRNA
223558 223631 + 74 90960990 LSL_RNA017 - 03 Pro tRNA
231540 231613 + 74 90960990 LSL_RNA018 - 03 Pro tRNA
268098 268170 - 73 90960990 LSL_RNA019 - 12 Thr tRNA
434853 436380 + 1528 90960990 LSL_RNA021 - 16S ribosomal RNA
436484 436558 + 75 90960990 LSL_RNA121 - 14 Ile tRNA
436590 436662 + 73 90960990 LSL_RNA122 - 02 Ala tRNA
436789 439568 + 2780 90960990 LSL_RNA025 - 23S ribosomal RNA
439813 439929 + 117 90960990 LSL_RNA108 - 5S ribosomal RNA
439935 440007 + 73 90960990 LSL_RNA123 - 07 Asn tRNA
440022 440111 + 90 90960990 LSL_RNA030 - 08 Ser tRNA
440126 440200 + 75 90960990 LSL_RNA124 - 04 Glu tRNA
440203 440275 + 73 90960990 LSL_RNA032 - 13 Val tRNA
440285 440357 + 73 90960990 LSL_RNA125 - 06 Asp tRNA
440383 440458 + 76 90960990 LSL_RNA126 - 17 Phe tRNA
440463 440545 + 83 90960990 LSL_RNA035 - 18 Tyr tRNA
440558 440631 + 74 90960990 LSL_RNA036 - 20 Trp tRNA
440638 440710 + 73 90960990 LSL_RNA037 - 09 His tRNA
440722 440793 + 72 90960990 LSL_RNA038 - 05 Gln tRNA
440803 440873 + 71 90960990 LSL_RNA039 - 19 Cys tRNA
440904 440988 + 85 90960990 LSL_RNA040 - 15 Leu tRNA
480393 481909 + 1517 90960990 LSL_RNA041 - 16S ribosomal RNA
481923 484882 + 2960 90960990 LSL_RNA042 - 23S ribosomal RNA
485127 485243 + 117 90960990 LSL_RNA044 - 5S ribosomal RNA
485249 485321 + 73 90960990 LSL_RNA045 - 13 Val tRNA
485325 485397 + 73 90960990 LSL_RNA046 - 10 Lys tRNA
485463 485535 + 73 90960990 LSL_RNA047 - 12 Thr tRNA
485540 485611 + 72 90960990 LSL_RNA048 - 01 Gly tRNA
485624 485709 + 86 90960990 LSL_RNA049 - 15 Leu tRNA
485718 485791 + 74 90960990 LSL_RNA050 - 11 Arg tRNA
485798 485871 + 74 90960990 LSL_RNA051 - 03 Pro tRNA
485896 485969 + 74 90960990 LSL_RNA052 - 16 Met tRNA
485986 486059 + 74 90960990 LSL_RNA053 - 16 Met tRNA
486100 486189 + 90 90960990 LSL_RNA054 - 08 Ser tRNA
486200 486273 + 74 90960990 LSL_RNA055 - 16 Met tRNA
486278 486350 + 73 90960990 LSL_RNA056 - 06 Asp tRNA
486360 486432 + 73 90960990 LSL_RNA057 - 17 Phe tRNA
486452 486522 + 71 90960990 LSL_RNA058 - 01 Gly tRNA
486531 486604 + 74 90960990 LSL_RNA059 - 14 Ile tRNA
486608 486695 + 88 90960990 LSL_RNA060 - 08 Ser tRNA
486700 486771 + 72 90960990 LSL_RNA061 - 04 Glu tRNA
486794 486867 + 74 90960990 LSL_RNA062 - 16 Met tRNA
486872 486944 + 73 90960990 LSL_RNA063 - 06 Asp tRNA
497858 497941 - 84 90960990 LSL_RNA064 - 15 Leu tRNA
567245 567318 - 74 90960990 LSL_RNA065 - 11 Arg tRNA
624842 624914 + 73 90960990 LSL_RNA066 - 05 Gln tRNA
723535 723605 - 71 90960990 LSL_RNA067 - 01 Gly tRNA
797253 797323 + 71 90960990 LSL_RNA127 - Xaa tRNA
825965 826052 - 88 90960990 LSL_RNA068 - 08 Ser tRNA
956549 956619 - 71 90960990 LSL_RNA069 - 01 Gly tRNA
1130195 1130267 - 73 90960990 LSL_RNA070 - 04 Glu tRNA
1203000 1203071 - 72 90960990 LSL_RNA071 - Xaa tRNA
1287765 1287850 - 86 90960990 LSL_RNA072 - 15 Leu tRNA
1295428 1295499 - 72 90960990 LSL_RNA073 - 05 Gln tRNA
1295503 1295588 - 86 90960990 LSL_RNA074 - 18 Tyr tRNA
1297458 1297783 - 326 90960990 LSL_RNA075 - 5S ribosomal RNA
1297819 1300778 - 2960 90960990 LSL_RNA076 - 23S ribosomal RNA
1300792 1302308 - 1517 90960990 LSL_RNA077 - 16S ribosomal RNA
1326134 1326207 - 74 90960990 LSL_RNA078 - 11 Arg tRNA
1406882 1406954 - 73 90960990 LSL_RNA079 - 12 Thr tRNA
1406970 1407041 - 72 90960990 LSL_RNA080 - 04 Glu tRNA
1407046 1407118 - 73 90960990 LSL_RNA081 - 07 Asn tRNA
1407124 1407240 - 117 90960990 LSL_RNA082 - 5S ribosomal RNA
1407481 1410440 - 2960 90960990 LSL_RNA083 - 23S ribosomal RNA
1410454 1411970 - 1517 90960990 LSL_RNA084 - 16S ribosomal RNA
1754142 1754217 + 76 90960990 LSL_RNA085 - 10 Lys tRNA
1763092 1763167 + 76 90960990 LSL_RNA086 - 10 Lys tRNA
1812695 1812782 - 88 90960990 LSL_RNA087 - 15 Leu tRNA
1812813 1812883 - 71 90960990 LSL_RNA088 - 19 Cys tRNA
1812908 1812979 - 72 90960990 LSL_RNA089 - 05 Gln tRNA
1812990 1813062 - 73 90960990 LSL_RNA090 - 09 His tRNA
1813069 1813142 - 74 90960990 LSL_RNA091 - 20 Trp tRNA
1813155 1813237 - 83 90960990 LSL_RNA092 - 18 Tyr tRNA
1813242 1813317 - 76 90960990 LSL_RNA128 - 17 Phe tRNA
1813343 1813415 - 73 90960990 LSL_RNA129 - 06 Asp tRNA
1813425 1813497 - 73 90960990 LSL_RNA095 - 13 Val tRNA
1813500 1813574 - 75 90960990 LSL_RNA130 - 04 Glu tRNA
1813589 1813678 - 90 90960990 LSL_RNA097 - 08 Ser tRNA
1813693 1813765 - 73 90960990 LSL_RNA131 - 07 Asn tRNA
1813771 1813887 - 117 90960990 LSL_RNA099 - 5S ribosomal RNA
1814132 1816911 - 2780 90960990 LSL_RNA100 - 23S ribosomal RNA
1817038 1817110 - 73 90960990 LSL_RNA132 - 02 Ala tRNA
1817142 1817216 - 75 90960990 LSL_RNA133 - 14 Ile tRNA
1817320 1818824 - 1505 90960990 LSL_RNA103 - 16S ribosomal RNA