Геном прокариот/Материалы:NC 008543

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   LOCUS       NC_008543            2998664 bp    DNA     circular BCT 05-JUL-2007
   DEFINITION  Burkholderia cenocepacia HI2424 chromosome 2, complete sequence.
   ACCESSION   NC_008543
   VERSION     NC_008543.1  GI:116691273
   KEYWORDS    .
   SOURCE      Burkholderia cenocepacia HI2424
     ORGANISM  Burkholderia cenocepacia HI2424
               Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales;
               Burkholderiaceae; Burkholderia; Burkholderia cepacia complex.
   REFERENCE   1  (bases 1 to 2998664)
     AUTHORS   Copeland,A., Lucas,S., Lapidus,A., Barry,K., Detter,J.C., Glavina
               del Rio,T., Hammon,N., Israni,S., Pitluck,S., Chain,P.,
               Malfatti,S., Shin,M., Vergez,L., Schmutz,J., Larimer,F., Land,M.,
               Hauser,L., Kyrpides,N., Kim,E., LiPuma,J.J., Gonzalez,C.F.,
               Konstantinidis,K., Tiedje,J.M. and Richardson,P.
     CONSRTM   US DOE Joint Genome Institute
     TITLE     Complete sequence of Chromosome 2 of Burkholderia cenocepacia
               HI2424
     JOURNAL   Unpublished
   REFERENCE   2  (bases 1 to 2998664)
     CONSRTM   NCBI Genome Project
     TITLE     Direct Submission
     JOURNAL   Submitted (26-OCT-2006) National Center for Biotechnology
               Information, NIH, Bethesda, MD 20894, USA
   REFERENCE   3  (bases 1 to 2998664)
     AUTHORS   Copeland,A., Lucas,S., Lapidus,A., Barry,K., Detter,J.C., Glavina
               del Rio,T., Hammon,N., Israni,S., Pitluck,S., Chain,P.,
               Malfatti,S., Shin,M., Vergez,L., Schmutz,J., Larimer,F., Land,M.,
               Hauser,L., Kyrpides,N., Kim,E., LiPuma,J.J., Gonzalez,C.F.,
               Konstantinidis,K., Tiedje,J.M. and Richardson,P.
     CONSRTM   US DOE Joint Genome Institute
     TITLE     Direct Submission
     JOURNAL   Submitted (30-AUG-2006) US DOE Joint Genome Institute, 2800
               Mitchell Drive B100, Walnut Creek, CA 94598-1698, USA
   COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
               NCBI review. The reference sequence was derived from CP000459.
               URL -- http://www.jgi.doe.gov
               JGI Project ID: 3635681
               Source DNA and bacteria available from James M. Tiedje
               (tiedjej@msu.edu)
               Contacts: James M. Tiedje (tiedjej@msu.edu)
                         Paul Richardson (microbes@cuba.jgi-psf.org)
               Quality assurance done by JGI-Stanford
               Annotation done by JGI-ORNL and JGI-PGF
               Finishing done by JGI-LLNL
               Finished microbial genomes have been curated to close all gaps with
               greater than 98% coverage of at least two independent clones. Each
               base pair has a minimum q (quality) value of 30 and the total error
               rate is less than one per 50000.
               The JGI and collaborators endorse the principles for the
               distribution and use of large scale sequencing data adopted by the
               larger genome sequencing community and urge users of this data to
               follow them. It is our intention to publish the work of this
               project in a timely fashion and we welcome collaborative
               interaction on the project and analysis.
               (http://www.genome.gov/page.cfm?pageID=10506376).
               COMPLETENESS: full length.


Расположение РНК[править]

Начало Конец Направление Длина PID Ген COG Комментарий
546733 546803 - 71 116691273 Bcen2424_R0074 - Xaa tRNA
753380 753458 + 79 116691273 Bcen2424_R0075 - 16 Met tRNA
1996181 1996265 + 85 116691273 Bcen2424_R0076 - 15 Leu tRNA
2376551 2376663 - 113 116691273 Bcen2424_R0077 - 5S ribosomal RNA
2376818 2379698 - 2881 116691273 Bcen2424_R0078 - 23S ribosomal RNA
2379975 2380050 - 76 116691273 Bcen2424_R0079 - 02 Ala tRNA
2380089 2380165 - 77 116691273 Bcen2424_R0080 - 14 Ile tRNA
2380230 2381707 - 1478 116691273 Bcen2424_R0081 - 16S ribosomal RNA