Геном прокариот/Материалы:NC 008543
(перенаправлено с «Материалы:NC 008543»)
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Базовый уровень статей |
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LOCUS NC_008543 2998664 bp DNA circular BCT 05-JUL-2007
DEFINITION Burkholderia cenocepacia HI2424 chromosome 2, complete sequence.
ACCESSION NC_008543
VERSION NC_008543.1 GI:116691273
KEYWORDS .
SOURCE Burkholderia cenocepacia HI2424
ORGANISM Burkholderia cenocepacia HI2424
Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales;
Burkholderiaceae; Burkholderia; Burkholderia cepacia complex.
REFERENCE 1 (bases 1 to 2998664)
AUTHORS Copeland,A., Lucas,S., Lapidus,A., Barry,K., Detter,J.C., Glavina
del Rio,T., Hammon,N., Israni,S., Pitluck,S., Chain,P.,
Malfatti,S., Shin,M., Vergez,L., Schmutz,J., Larimer,F., Land,M.,
Hauser,L., Kyrpides,N., Kim,E., LiPuma,J.J., Gonzalez,C.F.,
Konstantinidis,K., Tiedje,J.M. and Richardson,P.
CONSRTM US DOE Joint Genome Institute
TITLE Complete sequence of Chromosome 2 of Burkholderia cenocepacia
HI2424
JOURNAL Unpublished
REFERENCE 2 (bases 1 to 2998664)
CONSRTM NCBI Genome Project
TITLE Direct Submission
JOURNAL Submitted (26-OCT-2006) National Center for Biotechnology
Information, NIH, Bethesda, MD 20894, USA
REFERENCE 3 (bases 1 to 2998664)
AUTHORS Copeland,A., Lucas,S., Lapidus,A., Barry,K., Detter,J.C., Glavina
del Rio,T., Hammon,N., Israni,S., Pitluck,S., Chain,P.,
Malfatti,S., Shin,M., Vergez,L., Schmutz,J., Larimer,F., Land,M.,
Hauser,L., Kyrpides,N., Kim,E., LiPuma,J.J., Gonzalez,C.F.,
Konstantinidis,K., Tiedje,J.M. and Richardson,P.
CONSRTM US DOE Joint Genome Institute
TITLE Direct Submission
JOURNAL Submitted (30-AUG-2006) US DOE Joint Genome Institute, 2800
Mitchell Drive B100, Walnut Creek, CA 94598-1698, USA
COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final
NCBI review. The reference sequence was derived from CP000459.
URL -- http://www.jgi.doe.gov
JGI Project ID: 3635681
Source DNA and bacteria available from James M. Tiedje
(tiedjej@msu.edu)
Contacts: James M. Tiedje (tiedjej@msu.edu)
Paul Richardson (microbes@cuba.jgi-psf.org)
Quality assurance done by JGI-Stanford
Annotation done by JGI-ORNL and JGI-PGF
Finishing done by JGI-LLNL
Finished microbial genomes have been curated to close all gaps with
greater than 98% coverage of at least two independent clones. Each
base pair has a minimum q (quality) value of 30 and the total error
rate is less than one per 50000.
The JGI and collaborators endorse the principles for the
distribution and use of large scale sequencing data adopted by the
larger genome sequencing community and urge users of this data to
follow them. It is our intention to publish the work of this
project in a timely fashion and we welcome collaborative
interaction on the project and analysis.
(http://www.genome.gov/page.cfm?pageID=10506376).
COMPLETENESS: full length.
Расположение РНК
[править]| Начало | Конец | Направление | Длина | PID | Ген | COG | Комментарий |
|---|---|---|---|---|---|---|---|
| 546733 | 546803 | - | 71 | 116691273 | Bcen2424_R0074 | - | Xaa tRNA |
| 753380 | 753458 | + | 79 | 116691273 | Bcen2424_R0075 | - | 16 Met tRNA |
| 1996181 | 1996265 | + | 85 | 116691273 | Bcen2424_R0076 | - | 15 Leu tRNA |
| 2376551 | 2376663 | - | 113 | 116691273 | Bcen2424_R0077 | - | 5S ribosomal RNA |
| 2376818 | 2379698 | - | 2881 | 116691273 | Bcen2424_R0078 | - | 23S ribosomal RNA |
| 2379975 | 2380050 | - | 76 | 116691273 | Bcen2424_R0079 | - | 02 Ala tRNA |
| 2380089 | 2380165 | - | 77 | 116691273 | Bcen2424_R0080 | - | 14 Ile tRNA |
| 2380230 | 2381707 | - | 1478 | 116691273 | Bcen2424_R0081 | - | 16S ribosomal RNA |