Геном прокариот/Материалы:NC 002927
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Базовый уровень статей |
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LOCUS NC_002927 5339179 bp DNA circular BCT 07-JUN-2007
DEFINITION Bordetella bronchiseptica RB50, complete genome.
ACCESSION NC_002927
VERSION NC_002927.3 GI:33598993
KEYWORDS complete genome.
SOURCE Bordetella bronchiseptica RB50
ORGANISM Bordetella bronchiseptica RB50
Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales;
Alcaligenaceae; Bordetella.
REFERENCE 1 (bases 1 to 5339179)
AUTHORS Mattoo,S., Yuk,M.H., Huang,L.L. and Miller,J.F.
TITLE Regulation of type III secretion in Bordetella
JOURNAL Mol. Microbiol. 52 (4), 1201-1214 (2004)
PUBMED 15130135
REFERENCE 2 (bases 1 to 5339179)
AUTHORS Parkhill,J., Sebaihia,M., Preston,A., Murphy,L.D., Thomson,N.,
Harris,D.E., Holden,M.T., Churcher,C.M., Bentley,S.D.,
Mungall,K.L., Cerdeno-Tarraga,A.M., Temple,L., James,K., Harris,B.,
Quail,M.A., Achtman,M., Atkin,R., Baker,S., Basham,D., Bason,N.,
Cherevach,I., Chillingworth,T., Collins,M., Cronin,A., Davis,P.,
Doggett,J., Feltwell,T., Goble,A., Hamlin,N., Hauser,H.,
Holroyd,S., Jagels,K., Leather,S., Moule,S., Norberczak,H.,
O'Neil,S., Ormond,D., Price,C., Rabbinowitsch,E., Rutter,S.,
Sanders,M., Saunders,D., Seeger,K., Sharp,S., Simmonds,M.,
Skelton,J., Squares,R., Squares,S., Stevens,K., Unwin,L.,
Whitehead,S., Barrell,B.G. and Maskell,D.J.
TITLE Comparative analysis of the genome sequences of Bordetella
pertussis, Bordetella parapertussis and Bordetella bronchiseptica
JOURNAL Nat. Genet. 35 (1), 32-40 (2003)
PUBMED 12910271
REFERENCE 3 (bases 1 to 5339179)
AUTHORS Sebaihia,M.
TITLE Direct Submission
JOURNAL Submitted (06-AUG-2003) Submitted on behalf of the Pathogen
Sequencing Unit, Sanger Institute, Wellcome Trust Genome Campus,
Hinxton, Cambridge CB10 1SA E-mail: ms5@sanger.ac.uk
REFERENCE 4 (bases 1 to 5339179)
CONSRTM NCBI Genome Project
TITLE Direct Submission
JOURNAL Submitted (08-APR-2002) National Center for Biotechnology
Information, NIH, Bethesda, MD 20894, USA
COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final
NCBI review. The reference sequence was derived from BX470250.
On Aug 12, 2003 this sequence version replaced gi:27532920.
COMPLETENESS: full length.
Расположение РНК
[править]| Начало | Конец | Направление | Длина | PID | Ген | COG | Комментарий |
|---|---|---|---|---|---|---|---|
| 6221 | 6307 | + | 87 | 33598993 | BBt01 | - | 18 Tyr tRNA |
| 6496 | 6569 | + | 74 | 33598993 | BBt02 | - | 01 Gly tRNA |
| 6576 | 6650 | + | 75 | 33598993 | BBt03 | - | 12 Thr tRNA |
| 8008 | 8083 | + | 76 | 33598993 | BBt04 | - | 20 Trp tRNA |
| 321147 | 321223 | + | 77 | 33598993 | BBt05 | - | 03 Pro tRNA |
| 395490 | 395565 | - | 76 | 33598993 | BBt06 | - | 17 Phe tRNA |
| 530739 | 530823 | - | 85 | 33598993 | BBt07 | - | 15 Leu tRNA |
| 544134 | 544207 | + | 74 | 33598993 | BBt08 | - | 01 Gly tRNA |
| 961270 | 961346 | + | 77 | 33598993 | BBt09 | - | 05 Gln tRNA |
| 1429736 | 1429812 | - | 77 | 33598993 | BBt10 | - | 06 Asp tRNA |
| 1429848 | 1429923 | - | 76 | 33598993 | BBt11 | - | 04 Glu tRNA |
| 1429950 | 1430025 | - | 76 | 33598993 | BBt12 | - | 02 Ala tRNA |
| 1444508 | 1444584 | - | 77 | 33598993 | BBt13 | - | 06 Asp tRNA |
| 1444620 | 1444695 | - | 76 | 33598993 | BBt14 | - | 04 Glu tRNA |
| 1444727 | 1444802 | - | 76 | 33598993 | BBt15 | - | 02 Ala tRNA |
| 1525999 | 1526073 | - | 75 | 33598993 | BBt16 | - | 11 Arg tRNA |
| 1574071 | 1574147 | + | 77 | 33598993 | BBt17 | - | 03 Pro tRNA |
| 1669653 | 1669729 | + | 77 | 33598993 | BBt18 | - | 11 Arg tRNA |
| 1750478 | 1750553 | + | 76 | 33598993 | BBt19 | - | 09 His tRNA |
| 1782469 | 1782543 | + | 75 | 33598993 | BBt20 | - | 16 Met tRNA |
| 1828380 | 1828472 | + | 93 | 33598993 | BBt21 | - | 08 Ser tRNA |
| 1843200 | 1843276 | + | 77 | 33598993 | BBt22 | - | 11 Arg tRNA |
| 1858392 | 1858468 | + | 77 | 33598993 | BBt23 | - | 11 Arg tRNA |
| 1972922 | 1974453 | + | 1532 | 33598993 | BBr01 | - | 16S ribosomal RNA |
| 1974551 | 1974627 | + | 77 | 33598993 | BBt24 | - | 14 Ile tRNA |
| 1974648 | 1974723 | + | 76 | 33598993 | BBt25 | - | 02 Ala tRNA |
| 1975046 | 1977927 | + | 2882 | 33598993 | BBr02 | - | 23S ribosomal RNA |
| 1978102 | 1978216 | + | 115 | 33598993 | BBr03 | - | 5S ribosomal RNA |
| 2100978 | 2101054 | - | 77 | 33598993 | BBt26 | - | 16 Met tRNA |
| 2110538 | 2110622 | - | 85 | 33598993 | BBt27 | - | 15 Leu tRNA |
| 2111483 | 2111567 | - | 85 | 33598993 | BBt28 | - | 15 Leu tRNA |
| 2117960 | 2118035 | + | 76 | 33598993 | BBt29 | - | 13 Val tRNA |
| 2191896 | 2191972 | + | 77 | 33598993 | BBt30 | - | 03 Pro tRNA |
| 2201249 | 2201325 | + | 77 | 33598993 | BBt31 | - | 16 Met tRNA |
| 2289502 | 2289578 | + | 77 | 33598993 | BBt32 | - | 13 Val tRNA |
| 2336338 | 2336424 | + | 87 | 33598993 | BBt33 | - | 15 Leu tRNA |
| 2648847 | 2648922 | - | 76 | 33598993 | BBt34 | - | 02 Ala tRNA |
| 3371190 | 3371268 | - | 79 | 33598993 | BBt35 | - | 16 Met tRNA |
| 3481554 | 3481630 | + | 77 | 33598993 | BBt36 | - | 16 Met tRNA |
| 3485786 | 3485861 | - | 76 | 33598993 | BBt37 | - | 07 Asn tRNA |
| 3486033 | 3486108 | + | 76 | 33598993 | BBt38 | - | 12 Thr tRNA |
| 3617172 | 3617286 | - | 115 | 33598993 | BBr04 | - | 5S ribosomal RNA |
| 3617461 | 3620342 | - | 2882 | 33598993 | BBr05 | - | 23S ribosomal RNA |
| 3620665 | 3620740 | - | 76 | 33598993 | BBt39 | - | 02 Ala tRNA |
| 3620761 | 3620837 | - | 77 | 33598993 | BBt40 | - | 14 Ile tRNA |
| 3620935 | 3622466 | - | 1532 | 33598993 | BBr06 | - | 16S ribosomal RNA |
| 3723496 | 3723882 | + | 387 | 33598993 | BBs01 | - | tmRNA |
| 4114480 | 4114564 | - | 85 | 33598993 | BBt41 | - | 15 Leu tRNA |
| 4117535 | 4117619 | + | 85 | 33598993 | BBt42 | - | 15 Leu tRNA |
| 4135088 | 4135177 | + | 90 | 33598993 | BBt43 | - | 08 Ser tRNA |
| 4194126 | 4194201 | + | 76 | 33598993 | BBt44 | - | 01 Gly tRNA |
| 4217055 | 4217130 | + | 76 | 33598993 | BBt45 | - | 01 Gly tRNA |
| 4217191 | 4217264 | + | 74 | 33598993 | BBt46 | - | 19 Cys tRNA |
| 4410311 | 4410386 | - | 76 | 33598993 | BBt47 | - | 10 Lys tRNA |
| 4429396 | 4429471 | - | 76 | 33598993 | BBt48 | - | 10 Lys tRNA |
| 4474431 | 4474844 | - | 414 | 33598993 | BBs02 | - | |
| 4481211 | 4481325 | - | 115 | 33598993 | BBr07 | - | 5S ribosomal RNA |
| 4481500 | 4484381 | - | 2882 | 33598993 | BBr08 | - | 23S ribosomal RNA |
| 4484704 | 4484779 | - | 76 | 33598993 | BBt49 | - | 02 Ala tRNA |
| 4484800 | 4484876 | - | 77 | 33598993 | BBt50 | - | 14 Ile tRNA |
| 4484974 | 4486505 | - | 1532 | 33598993 | BBr09 | - | 16S ribosomal RNA |
| 4551824 | 4551898 | - | 75 | 33598993 | BBt51 | - | 13 Val tRNA |
| 4614947 | 4615037 | - | 91 | 33598993 | BBt52 | - | 08 Ser tRNA |
| 4878900 | 4878974 | - | 75 | 33598993 | BBt53 | - | 11 Arg tRNA |
| 5183947 | 5184022 | + | 76 | 33598993 | BBt54 | - | 12 Thr tRNA |
| 5210499 | 5210574 | + | 76 | 33598993 | BBt55 | - | 07 Asn tRNA |