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Геном прокариот/Материалы:NC 003361

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   LOCUS       NC_003361            1173390 bp    DNA     circular BCT 02-DEC-2005
   DEFINITION  Chlamydophila caviae GPIC, complete genome.
   ACCESSION   NC_003361
   VERSION     NC_003361.3  GI:29839769
   KEYWORDS    .
   SOURCE      Chlamydophila caviae GPIC
     ORGANISM  Chlamydophila caviae GPIC
               Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydophila.
   REFERENCE   1  (bases 1 to 1173390)
     AUTHORS   Read,T.D., Myers,G.S., Brunham,R.C., Nelson,W.C., Paulsen,I.T.,
               Heidelberg,J., Holtzapple,E., Khouri,H., Federova,N.B., Carty,H.A.,
               Umayam,L.A., Haft,D.H., Peterson,J., Beanan,M.J., White,O.,
               Salzberg,S.L., Hsia,R.C., McClarty,G., Rank,R.G., Bavoil,P.M. and
               Fraser,C.M.
     TITLE     Genome sequence of Chlamydophila caviae (Chlamydia psittaci GPIC):
               examining the role of niche-specific genes in the evolution of the
               Chlamydiaceae
     JOURNAL   Nucleic Acids Res. 31 (8), 2134-2147 (2003)
      PUBMED   12682364
   REFERENCE   2  (bases 1 to 1173390)
     AUTHORS   Read,T., Myers,G., Brunham,R., Nelson,W., Paulsen,I.,
               Heidelberg,J., Holtzapple,E., Khouri,H., Fedorova,N., Carty,H.,
               Umayam,L., Haft,D., Peterson,J., Beanan,M., White,O., Salzberg,S.,
               Hsia,R.-C., McClarty,G., Rank,R., Bavoil,P. and Fraser,C.
     TITLE     Direct Submission
     JOURNAL   Submitted (29-OCT-2002) The Institute for Genomic Research, 9712
               Medical Center Dr, Rockville, MD 20850, USA
   REFERENCE   3  (bases 1 to 1173390)
     AUTHORS   .
     CONSRTM   NCBI Genome Project
     TITLE     Direct Submission
     JOURNAL   Submitted (08-APR-2002) National Center for Biotechnology
               Information, NIH, Bethesda, MD 20894, USA
   COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
               NCBI review. The reference sequence was derived from AE015925.
               On Apr 15, 2003 this sequence version replaced gi:26106303.
               COMPLETENESS: full length.


Расположение РНК

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Начало Конец Направление Длина PID Ген COG Комментарий
5212 5284 - 73 29839769 CCA_t01 - 02 Ala tRNA
31667 31739 + 73 29839769 CCA_t02 - 11 Arg tRNA
52238 52310 + 73 29839769 CCA_t03 - 12 Thr tRNA
54398 54470 - 73 29839769 CCA_t04 - 10 Lys tRNA
54497 54571 - 75 29839769 CCA_t05 - 04 Glu tRNA
57735 57805 - 71 29839769 CCA_t06 - 01 Gly tRNA
98333 98416 - 84 29839769 CCA_t07 - 15 Leu tRNA
122375 122457 + 83 29839769 CCA_t08 - 15 Leu tRNA
130116 130203 + 88 29839769 CCA_t09 - 08 Ser tRNA
159272 159353 + 82 29839769 CCA_t10 - 15 Leu tRNA
162068 162141 - 74 29839769 CCA_t11 - 11 Arg tRNA
168077 168159 - 83 29839769 CCA_t12 - 15 Leu tRNA
209996 210068 + 73 29839769 CCA_t13 - 17 Phe tRNA
214462 214548 + 87 29839769 CCA_t14 - 08 Ser tRNA
349998 350084 - 87 29839769 CCA_t15 - 08 Ser tRNA
428232 428305 - 74 29839769 CCA_t16 - 11 Arg tRNA
482104 482178 - 75 29839769 CCA_t17 - 03 Pro tRNA
590122 590195 - 74 29839769 CCA_t18 - 06 Asp tRNA
590199 590271 - 73 29839769 CCA_t19 - 13 Val tRNA
594018 594090 + 73 29839769 CCA_t20 - 12 Thr tRNA
594097 594179 + 83 29839769 CCA_t21 - 18 Tyr tRNA
673902 673975 - 74 29839769 CCA_t22 - 14 Ile tRNA
673981 674053 - 73 29839769 CCA_t23 - 02 Ala tRNA
694648 694721 - 74 29839769 CCA_t24 - 16 Met tRNA
694742 694814 - 73 29839769 CCA_t25 - 16 Met tRNA
738275 738346 + 72 29839769 CCA_t26 - 07 Asn tRNA
806326 806398 - 73 29839769 CCA_t27 - 20 Trp tRNA
807679 807750 - 72 29839769 CCA_t28 - 12 Thr tRNA
809848 809920 + 73 29839769 CCA_t29 - 16 Met tRNA
844984 845065 - 82 29839769 CCA_t30 - 15 Leu tRNA
879100 879184 - 85 29839769 CCA_t31 - 08 Ser tRNA
883805 883878 + 74 29839769 CCA_t32 - 13 Val tRNA
943399 943470 - 72 29839769 CCA_t33 - 05 Gln tRNA
992926 992996 + 71 29839769 CCA_t34 - 19 Cys tRNA
1020573 1020691 - 119 29839769 CCA_r01 - 5S ribosomal RNA
1020804 1023753 - 2950 29839769 CCA_r02 - 23S ribosomal RNA
1023977 1025525 - 1549 29839769 CCA_r03 - 16S ribosomal RNA
1026352 1026425 + 74 29839769 CCA_t35 - 09 His tRNA
1064489 1064560 + 72 29839769 CCA_t36 - 01 Gly tRNA
1138040 1138112 - 73 29839769 CCA_t37 - 11 Arg tRNA
1171136 1171209 - 74 29839769 CCA_t38 - 03 Pro tRNA