Геном прокариот/Материалы:NC 003361
Внешний вид
Базовый уровень статей | |
LOCUS NC_003361 1173390 bp DNA circular BCT 02-DEC-2005 DEFINITION Chlamydophila caviae GPIC, complete genome. ACCESSION NC_003361 VERSION NC_003361.3 GI:29839769 KEYWORDS . SOURCE Chlamydophila caviae GPIC ORGANISM Chlamydophila caviae GPIC Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydophila. REFERENCE 1 (bases 1 to 1173390) AUTHORS Read,T.D., Myers,G.S., Brunham,R.C., Nelson,W.C., Paulsen,I.T., Heidelberg,J., Holtzapple,E., Khouri,H., Federova,N.B., Carty,H.A., Umayam,L.A., Haft,D.H., Peterson,J., Beanan,M.J., White,O., Salzberg,S.L., Hsia,R.C., McClarty,G., Rank,R.G., Bavoil,P.M. and Fraser,C.M. TITLE Genome sequence of Chlamydophila caviae (Chlamydia psittaci GPIC): examining the role of niche-specific genes in the evolution of the Chlamydiaceae JOURNAL Nucleic Acids Res. 31 (8), 2134-2147 (2003) PUBMED 12682364 REFERENCE 2 (bases 1 to 1173390) AUTHORS Read,T., Myers,G., Brunham,R., Nelson,W., Paulsen,I., Heidelberg,J., Holtzapple,E., Khouri,H., Fedorova,N., Carty,H., Umayam,L., Haft,D., Peterson,J., Beanan,M., White,O., Salzberg,S., Hsia,R.-C., McClarty,G., Rank,R., Bavoil,P. and Fraser,C. TITLE Direct Submission JOURNAL Submitted (29-OCT-2002) The Institute for Genomic Research, 9712 Medical Center Dr, Rockville, MD 20850, USA REFERENCE 3 (bases 1 to 1173390) AUTHORS . CONSRTM NCBI Genome Project TITLE Direct Submission JOURNAL Submitted (08-APR-2002) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from AE015925. On Apr 15, 2003 this sequence version replaced gi:26106303. COMPLETENESS: full length.
Расположение РНК
[править]Начало | Конец | Направление | Длина | PID | Ген | COG | Комментарий |
---|---|---|---|---|---|---|---|
5212 | 5284 | - | 73 | 29839769 | CCA_t01 | - | 02 Ala tRNA |
31667 | 31739 | + | 73 | 29839769 | CCA_t02 | - | 11 Arg tRNA |
52238 | 52310 | + | 73 | 29839769 | CCA_t03 | - | 12 Thr tRNA |
54398 | 54470 | - | 73 | 29839769 | CCA_t04 | - | 10 Lys tRNA |
54497 | 54571 | - | 75 | 29839769 | CCA_t05 | - | 04 Glu tRNA |
57735 | 57805 | - | 71 | 29839769 | CCA_t06 | - | 01 Gly tRNA |
98333 | 98416 | - | 84 | 29839769 | CCA_t07 | - | 15 Leu tRNA |
122375 | 122457 | + | 83 | 29839769 | CCA_t08 | - | 15 Leu tRNA |
130116 | 130203 | + | 88 | 29839769 | CCA_t09 | - | 08 Ser tRNA |
159272 | 159353 | + | 82 | 29839769 | CCA_t10 | - | 15 Leu tRNA |
162068 | 162141 | - | 74 | 29839769 | CCA_t11 | - | 11 Arg tRNA |
168077 | 168159 | - | 83 | 29839769 | CCA_t12 | - | 15 Leu tRNA |
209996 | 210068 | + | 73 | 29839769 | CCA_t13 | - | 17 Phe tRNA |
214462 | 214548 | + | 87 | 29839769 | CCA_t14 | - | 08 Ser tRNA |
349998 | 350084 | - | 87 | 29839769 | CCA_t15 | - | 08 Ser tRNA |
428232 | 428305 | - | 74 | 29839769 | CCA_t16 | - | 11 Arg tRNA |
482104 | 482178 | - | 75 | 29839769 | CCA_t17 | - | 03 Pro tRNA |
590122 | 590195 | - | 74 | 29839769 | CCA_t18 | - | 06 Asp tRNA |
590199 | 590271 | - | 73 | 29839769 | CCA_t19 | - | 13 Val tRNA |
594018 | 594090 | + | 73 | 29839769 | CCA_t20 | - | 12 Thr tRNA |
594097 | 594179 | + | 83 | 29839769 | CCA_t21 | - | 18 Tyr tRNA |
673902 | 673975 | - | 74 | 29839769 | CCA_t22 | - | 14 Ile tRNA |
673981 | 674053 | - | 73 | 29839769 | CCA_t23 | - | 02 Ala tRNA |
694648 | 694721 | - | 74 | 29839769 | CCA_t24 | - | 16 Met tRNA |
694742 | 694814 | - | 73 | 29839769 | CCA_t25 | - | 16 Met tRNA |
738275 | 738346 | + | 72 | 29839769 | CCA_t26 | - | 07 Asn tRNA |
806326 | 806398 | - | 73 | 29839769 | CCA_t27 | - | 20 Trp tRNA |
807679 | 807750 | - | 72 | 29839769 | CCA_t28 | - | 12 Thr tRNA |
809848 | 809920 | + | 73 | 29839769 | CCA_t29 | - | 16 Met tRNA |
844984 | 845065 | - | 82 | 29839769 | CCA_t30 | - | 15 Leu tRNA |
879100 | 879184 | - | 85 | 29839769 | CCA_t31 | - | 08 Ser tRNA |
883805 | 883878 | + | 74 | 29839769 | CCA_t32 | - | 13 Val tRNA |
943399 | 943470 | - | 72 | 29839769 | CCA_t33 | - | 05 Gln tRNA |
992926 | 992996 | + | 71 | 29839769 | CCA_t34 | - | 19 Cys tRNA |
1020573 | 1020691 | - | 119 | 29839769 | CCA_r01 | - | 5S ribosomal RNA |
1020804 | 1023753 | - | 2950 | 29839769 | CCA_r02 | - | 23S ribosomal RNA |
1023977 | 1025525 | - | 1549 | 29839769 | CCA_r03 | - | 16S ribosomal RNA |
1026352 | 1026425 | + | 74 | 29839769 | CCA_t35 | - | 09 His tRNA |
1064489 | 1064560 | + | 72 | 29839769 | CCA_t36 | - | 01 Gly tRNA |
1138040 | 1138112 | - | 73 | 29839769 | CCA_t37 | - | 11 Arg tRNA |
1171136 | 1171209 | - | 74 | 29839769 | CCA_t38 | - | 03 Pro tRNA |