Геном прокариот/Материалы:NC 004463
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Базовый уровень статей |
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LOCUS NC_004463 9105828 bp DNA circular BCT 29-JAN-2007
DEFINITION Bradyrhizobium japonicum USDA 110, complete genome.
ACCESSION NC_004463
VERSION NC_004463.1 GI:27375111
KEYWORDS .
SOURCE Bradyrhizobium japonicum USDA 110
ORGANISM Bradyrhizobium japonicum USDA 110
Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales;
Bradyrhizobiaceae; Bradyrhizobium.
REFERENCE 1 (bases 1 to 9105828)
AUTHORS Kaneko,T., Nakamura,Y., Sato,S., Minamisawa,K., Uchiumi,T.,
Sasamoto,S., Watanabe,A., Idesawa,K., Iriguchi,M., Kawashima,K.,
Kohara,M., Matsumoto,M., Shimpo,S., Tsuruoka,H., Wada,T., Yamada,M.
and Tabata,S.
TITLE Complete genomic sequence of nitrogen-fixing symbiotic bacterium
Bradyrhizobium japonicum USDA110 (supplement)
JOURNAL DNA Res. 9 (6), 225-256 (2002)
PUBMED 12597279
REFERENCE 2 (bases 1 to 9105828)
AUTHORS Kaneko,T., Nakamura,Y., Sato,S., Minamisawa,K., Uchiumi,T.,
Sasamoto,S., Watanabe,A., Idesawa,K., Iriguchi,M., Kawashima,K.,
Kohara,M., Matsumoto,M., Shimpo,S., Tsuruoka,H., Wada,T., Yamada,M.
and Tabata,S.
TITLE Complete genomic sequence of nitrogen-fixing symbiotic bacterium
Bradyrhizobium japonicum USDA110
JOURNAL DNA Res. 9 (6), 189-197 (2002)
PUBMED 12597275
REFERENCE 3 (bases 1 to 9105828)
CONSRTM NCBI Genome Project
TITLE Direct Submission
JOURNAL Submitted (27-DEC-2002) National Center for Biotechnology
Information, NIH, Bethesda, MD 20894, USA
REFERENCE 4 (bases 1 to 9105828)
AUTHORS Kaneko,T.
TITLE Direct Submission
JOURNAL Submitted (20-NOV-2002) Kazusa DNA Research Institute, The First
Laboratory for Plant Gene Research, 2-6-7 Kazusa-kamatari,
Kisarazu, Chiba 292-0812, Japan
COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final
NCBI review. The reference sequence was derived from BA000040.
COMPLETENESS: full length.
Расположение РНК
[править]| Начало | Конец | Направление | Длина | PID | Ген | COG | Комментарий |
|---|---|---|---|---|---|---|---|
| 122281 | 122357 | - | 77 | 27375111 | Bjat01 | - | |
| 333518 | 333607 | - | 90 | 27375111 | Bjat02 | - | |
| 451301 | 451390 | - | 90 | 27375111 | Bjat03 | - | |
| 591251 | 591326 | + | 76 | 27375111 | Bjat04 | - | |
| 603930 | 604005 | - | 76 | 27375111 | Bjat05 | - | |
| 640125 | 640199 | - | 75 | 27375111 | Bjat06 | - | |
| 766675 | 766761 | + | 87 | 27375111 | Bjat07 | - | |
| 785149 | 785224 | - | 76 | 27375111 | Bjat08 | - | |
| 923931 | 924007 | - | 77 | 27375111 | Bjat09 | - | |
| 1228026 | 1228099 | + | 74 | 27375111 | Bjat10 | - | |
| 1363088 | 1363162 | - | 75 | 27375111 | Bjat11 | - | |
| 1374308 | 1374383 | + | 76 | 27375111 | Bjat12 | - | |
| 1456450 | 1456534 | - | 85 | 27375111 | Bjat13 | - | |
| 1528226 | 1529715 | + | 1490 | 27375111 | Bjar01 | - | 16S ribosomal RNA |
| 1529942 | 1530018 | + | 77 | 27375111 | Bjat14 | - | |
| 1530052 | 1530127 | + | 76 | 27375111 | Bjat15 | - | |
| 1530524 | 1533397 | + | 2874 | 27375111 | Bjar02 | - | 23S ribosomal RNA |
| 1533504 | 1533622 | + | 119 | 27375111 | Bjar03 | - | 5S ribosomal RNA |
| 1754649 | 1754724 | - | 76 | 27375111 | Bjat16 | - | |
| 1833628 | 1833703 | - | 76 | 27375111 | Bjat17 | - | |
| 2362342 | 2362416 | - | 75 | 27375111 | Bjat18 | - | |
| 2497101 | 2497176 | - | 76 | 27375111 | Bjat19 | - | |
| 2812727 | 2812803 | + | 77 | 27375111 | Bjat50 | - | Xaa tRNA |
| 2907070 | 2907144 | + | 75 | 27375111 | Bjat20 | - | |
| 4317579 | 4317652 | + | 74 | 27375111 | Bjat21 | - | |
| 4859667 | 4859741 | - | 75 | 27375111 | Bjat22 | - | |
| 4872412 | 4872488 | + | 77 | 27375111 | Bjat23 | - | |
| 4897049 | 4897125 | - | 77 | 27375111 | Bjat24 | - | |
| 4936093 | 4936166 | + | 74 | 27375111 | Bjat25 | - | |
| 4950144 | 4950218 | + | 75 | 27375111 | Bjat26 | - | |
| 5014685 | 5014774 | - | 90 | 27375111 | Bjat27 | - | |
| 5113708 | 5113783 | + | 76 | 27375111 | Bjat28 | - | |
| 5460079 | 5460155 | - | 77 | 27375111 | Bjat29 | - | |
| 5480484 | 5480560 | - | 77 | 27375111 | Bjat30 | - | |
| 5488017 | 5488101 | - | 85 | 27375111 | Bjat31 | - | |
| 5565093 | 5565170 | - | 78 | 27375111 | Bjat32 | - | |
| 5640958 | 5641050 | + | 93 | 27375111 | Bjat33 | - | |
| 5805509 | 5805593 | - | 85 | 27375111 | Bjat34 | - | |
| 5872897 | 5872973 | - | 77 | 27375111 | Bjat35 | - | |
| 5983888 | 5983963 | - | 76 | 27375111 | Bjat36 | - | |
| 6046752 | 6046825 | - | 74 | 27375111 | Bjat37 | - | |
| 6059860 | 6059945 | - | 86 | 27375111 | Bjat38 | - | |
| 6063033 | 6063107 | + | 75 | 27375111 | Bjat39 | - | |
| 6149083 | 6149171 | + | 89 | 27375111 | Bjat40 | - | |
| 6191247 | 6191320 | - | 74 | 27375111 | Bjat41 | - | |
| 6191318 | 6191390 | - | 73 | 27375111 | Bjat42 | - | |
| 7081524 | 7081599 | - | 76 | 27375111 | Bjat43 | - | |
| 7174984 | 7175063 | + | 80 | 27375111 | Bjas01 | - | tmRNA-acceptor_RNA |
| 7175103 | 7175313 | + | 211 | 27375111 | Bjas02 | - | tmRNA-coding_RNA |
| 7288564 | 7288986 | + | 423 | 27375111 | Bjas03 | - | RNA subunit of RNase P |
| 7701500 | 7701576 | - | 77 | 27375111 | Bjat44 | - | |
| 8072739 | 8072813 | - | 75 | 27375111 | Bjat45 | - | |
| 8130112 | 8130188 | - | 77 | 27375111 | Bjat46 | - | |
| 8472804 | 8472878 | - | 75 | 27375111 | Bjat47 | - | |
| 8645259 | 8645335 | - | 77 | 27375111 | Bjat48 | - | |
| 8887549 | 8887625 | - | 77 | 27375111 | Bjat49 | - |