Геном прокариот/Материалы:NC 004572
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LOCUS NC_004572 927303 bp DNA circular BCT 03-APR-2006 DEFINITION Tropheryma whipplei str. Twist, complete genome. ACCESSION NC_004572 VERSION NC_004572.3 GI:32447382 KEYWORDS . SOURCE Tropheryma whipplei str. Twist ORGANISM Tropheryma whipplei str. Twist Bacteria; Actinobacteria; Actinobacteridae; Actinomycetales; Micrococcineae; Cellulomonadaceae; Tropheryma. REFERENCE 1 (bases 1 to 927303) AUTHORS Raoult,D., Ogata,H., Audic,S., Robert,C., Suhre,K., Drancourt,M. and Claverie,J.M. TITLE Tropheryma whipplei Twist: A Human Pathogenic Actinobacteria With a Reduced Genome JOURNAL Genome Res. 13 (8), 1800-1809 (2003) PUBMED 12902375 REFERENCE 2 (bases 1 to 927303) AUTHORS . CONSRTM NCBI Genome Project TITLE Direct Submission JOURNAL Submitted (10-SEP-2004) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA REFERENCE 3 (bases 1 to 927303) AUTHORS Raoult,D., Audic,S., Robert,C., Ogata,H., Suhre,K., Drancourt,M. and Claverie,J.-M. TITLE Direct Submission JOURNAL Submitted (26-JUL-2002) Unite des Rickettsies, Faculte de Medecine, CNRS UMR 6020, IFR 48, Universite de la Mediterranee, 27 boulevard Jean Moulin, Marseille Cedex 05 13385, France COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from AE014184. On Jul 3, 2003 this sequence version replaced gi:31340554. COMPLETENESS: full length.
Расположение РНК
[править]Начало | Конец | Направление | Длина | PID | Ген | COG | Комментарий |
---|---|---|---|---|---|---|---|
9278 | 9351 | + | 74 | 32447382 | TWTRNA01 | - | 14 Ile tRNA |
9365 | 9441 | + | 77 | 32447382 | TWTRNA02 | - | 02 Ala tRNA |
61998 | 62074 | - | 77 | 32447382 | TWTRNA03 | - | 16 Met tRNA |
62093 | 62164 | - | 72 | 32447382 | TWTRNA04 | - | 12 Thr tRNA |
62733 | 62815 | - | 83 | 32447382 | TWTRNA05 | - | 18 Tyr tRNA |
106403 | 106479 | - | 77 | 32447382 | TWTRNA06 | - | 03 Pro tRNA |
131120 | 131206 | + | 87 | 32447382 | TWTRNA07 | - | 08 Ser tRNA |
185163 | 185238 | - | 76 | 32447382 | TWTRNA08 | - | 17 Phe tRNA |
185244 | 185317 | - | 74 | 32447382 | TWTRNA09 | - | 06 Asp tRNA |
185327 | 185402 | - | 76 | 32447382 | TWTRNA10 | - | 04 Glu tRNA |
213475 | 214999 | + | 1525 | 32447382 | TWTRNA11 | - | 16S ribosomal RNA |
215293 | 218394 | + | 3102 | 32447382 | TWTRNA12 | - | 23S ribosomal RNA |
218447 | 218566 | + | 120 | 32447382 | TWTRNA13 | - | 5S ribosomal RNA |
278117 | 278485 | + | 369 | 32447382 | TWTRNA14 | - | tmRNA |
281126 | 281201 | + | 76 | 32447382 | TWTRNA15 | - | 10 Lys tRNA |
294045 | 294116 | + | 72 | 32447382 | TWTRNA16 | - | 05 Gln tRNA |
340634 | 340707 | + | 74 | 32447382 | TWTRNA17 | - | 13 Val tRNA |
342277 | 342627 | + | 351 | 32447382 | TWTRNA18 | - | RNA subunit (M1 RNA) of ribonuclease P |
371436 | 371508 | + | 73 | 32447382 | TWTRNA19 | - | 07 Asn tRNA |
372496 | 372567 | + | 72 | 32447382 | TWTRNA20 | - | 11 Arg tRNA |
374146 | 374231 | - | 86 | 32447382 | TWTRNA21 | - | 15 Leu tRNA |
397744 | 397830 | + | 87 | 32447382 | TWTRNA22 | - | 15 Leu tRNA |
414168 | 414241 | - | 74 | 32447382 | TWTRNA23 | - | 16 Met tRNA |
428946 | 429018 | - | 73 | 32447382 | TWTRNA24 | - | 12 Thr tRNA |
436472 | 436547 | + | 76 | 32447382 | TWTRNA25 | - | 11 Arg tRNA |
480920 | 480991 | + | 72 | 32447382 | TWTRNA26 | - | 01 Gly tRNA |
481036 | 481106 | + | 71 | 32447382 | TWTRNA27 | - | 19 Cys tRNA |
481122 | 481193 | + | 72 | 32447382 | TWTRNA28 | - | 13 Val tRNA |
481241 | 481312 | + | 72 | 32447382 | TWTRNA29 | - | 13 Val tRNA |
495779 | 495851 | - | 73 | 32447382 | TWTRNA30 | - | 09 His tRNA |
496696 | 496768 | + | 73 | 32447382 | TWTRNA31 | - | 11 Arg tRNA |
557615 | 557690 | - | 76 | 32447382 | TWTRNA32 | - | 02 Ala tRNA |
576789 | 576862 | - | 74 | 32447382 | TWTRNA33 | - | 03 Pro tRNA |
587187 | 587260 | - | 74 | 32447382 | TWTRNA34 | - | 02 Ala tRNA |
610152 | 610224 | - | 73 | 32447382 | TWTRNA35 | - | 04 Glu tRNA |
702277 | 702352 | + | 76 | 32447382 | TWTRNA36 | - | 04 Glu tRNA |
702362 | 702435 | + | 74 | 32447382 | TWTRNA37 | - | 06 Asp tRNA |
702441 | 702516 | + | 76 | 32447382 | TWTRNA38 | - | 17 Phe tRNA |
707474 | 707544 | + | 71 | 32447382 | TWTRNA39 | - | 05 Gln tRNA |
726656 | 726736 | + | 81 | 32447382 | TWTRNA40 | - | 15 Leu tRNA |
730744 | 730815 | + | 72 | 32447382 | TWTRNA41 | - | 04 Glu tRNA |
730821 | 730896 | + | 76 | 32447382 | TWTRNA42 | - | 17 Phe tRNA |
734524 | 734597 | - | 74 | 32447382 | TWTRNA43 | - | 16 Met tRNA |
773514 | 773586 | - | 73 | 32447382 | TWTRNA44 | - | 10 Lys tRNA |
805858 | 805931 | - | 74 | 32447382 | TWTRNA45 | - | 12 Thr tRNA |
820306 | 820379 | + | 74 | 32447382 | TWTRNA46 | - | 03 Pro tRNA |
828367 | 828439 | - | 73 | 32447382 | TWTRNA47 | - | 20 Trp tRNA |
839182 | 839266 | + | 85 | 32447382 | TWTRNA48 | - | 08 Ser tRNA |
840527 | 840615 | + | 89 | 32447382 | TWTRNA49 | - | 08 Ser tRNA |
840640 | 840712 | + | 73 | 32447382 | TWTRNA50 | - | 11 Arg tRNA |
888123 | 888207 | + | 85 | 32447382 | TWTRNA51 | - | 08 Ser tRNA |
889338 | 889421 | - | 84 | 32447382 | TWTRNA52 | - | 15 Leu tRNA |
897599 | 897672 | - | 74 | 32447382 | TWTRNA53 | - | 15 Leu tRNA |
904638 | 904711 | + | 74 | 32447382 | TWTRNA54 | - | 01 Gly tRNA |