Геном прокариот/Материалы:NC 005027
Внешний вид
Базовый уровень статей | |
LOCUS NC_005027 7145576 bp DNA circular BCT 22-NOV-2006 DEFINITION Rhodopirellula baltica SH 1, complete genome. ACCESSION NC_005027 VERSION NC_005027.1 GI:32470666 KEYWORDS complete genome. SOURCE Rhodopirellula baltica SH 1 ORGANISM Rhodopirellula baltica SH 1 Bacteria; Planctomycetes; Planctomycetacia; Planctomycetales; Planctomycetaceae; Rhodopirellula. REFERENCE 1 (bases 1 to 7145576) AUTHORS Gloeckner,F.O., Kube,M., Bauer,M., Teeling,H., Lombardot,T., Ludwig,W., Gade,D., Beck,A., Borzym,K., Heitmann,K., Rabus,R., Schlesner,H., Amann,R. and Reinhardt,R. TITLE Complete genome sequence of the marine planctomycete Pirellula sp. strain 1 JOURNAL Proc. Natl. Acad. Sci. U.S.A. 100 (14), 8298-8303 (2003) PUBMED 12835416 REFERENCE 2 (bases 1 to 7145576) CONSRTM NCBI Genome Project TITLE Direct Submission JOURNAL Submitted (11-SEP-2004) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA REFERENCE 3 (bases 1 to 7145576) CONSRTM NCBI Microbial Genomes Annotation Project TITLE Direct Submission JOURNAL Submitted (25-JUN-2001) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BX119912. COMPLETENESS: full length.
Расположение РНК
[править]Начало | Конец | Направление | Длина | PID | Ген | COG | Комментарий |
---|---|---|---|---|---|---|---|
15141 | 15217 | + | 77 | 32470666 | RBt01 | - | 11 Arg tRNA |
86868 | 86941 | + | 74 | 32470666 | RBt02 | - | 13 Val tRNA |
133023 | 133099 | + | 77 | 32470666 | RBt03 | - | 13 Val tRNA |
231979 | 232052 | + | 74 | 32470666 | RBt04 | - | 06 Asp tRNA |
425584 | 425655 | - | 72 | 32470666 | RBt05 | - | 15 Leu tRNA |
425672 | 425742 | - | 71 | 32470666 | RBt06 | - | 02 Ala tRNA |
426162 | 426236 | - | 75 | 32470666 | RBt07 | - | 04 Glu tRNA |
426431 | 426504 | - | 74 | 32470666 | RBt08 | - | |
426774 | 426845 | - | 72 | 32470666 | RBt09 | - | 07 Asn tRNA |
426854 | 426924 | - | 71 | 32470666 | RBt10 | - | 01 Gly tRNA |
427045 | 427117 | - | 73 | 32470666 | RBt11 | - | 10 Lys tRNA |
427143 | 427215 | - | 73 | 32470666 | RBt12 | - | 14 Ile tRNA |
427480 | 427552 | - | 73 | 32470666 | RBt13 | - | 03 Pro tRNA |
468301 | 468382 | + | 82 | 32470666 | RBt14 | - | 08 Ser tRNA |
574208 | 574291 | + | 84 | 32470666 | RBt15 | - | 15 Leu tRNA |
790270 | 790354 | + | 85 | 32470666 | RBt16 | - | 15 Leu tRNA |
1034374 | 1034447 | + | 74 | 32470666 | RBt17 | - | 12 Thr tRNA |
1124293 | 1124381 | + | 89 | 32470666 | RBt18 | - | 08 Ser tRNA |
1124509 | 1124581 | + | 73 | 32470666 | RBt19 | - | 10 Lys tRNA |
1209090 | 1209161 | + | 72 | 32470666 | RBt20 | - | 05 Gln tRNA |
1636075 | 1636151 | - | 77 | 32470666 | RBt21 | - | 16 Met tRNA |
1916738 | 1916814 | - | 77 | 32470666 | RBt22 | - | 03 Pro tRNA |
2104395 | 2104468 | + | 74 | 32470666 | RBt23 | - | 11 Arg tRNA |
2156459 | 2156532 | + | 74 | 32470666 | RBt24 | - | 09 His tRNA |
2481587 | 2481660 | - | 74 | 32470666 | RBt25 | - | 11 Arg tRNA |
2823426 | 2823502 | + | 77 | 32470666 | RBt26 | - | 11 Arg tRNA |
2964996 | 2965068 | - | 73 | 32470666 | RBt27 | - | 01 Gly tRNA |
3088066 | 3088138 | - | 73 | 32470666 | RBt28 | - | 02 Ala tRNA |
3163724 | 3163810 | + | 87 | 32470666 | RBt29 | - | 08 Ser tRNA |
3188257 | 3188330 | + | 74 | 32470666 | RBt30 | - | 03 Pro tRNA |
3370937 | 3371021 | + | 85 | 32470666 | RBt31 | - | 15 Leu tRNA |
3655829 | 3655905 | - | 77 | 32470666 | RBt32 | - | 16 Met tRNA |
4216684 | 4216756 | + | 73 | 32470666 | RBt33 | - | 12 Thr tRNA |
4216923 | 4217004 | + | 82 | 32470666 | RBt34 | - | 18 Tyr tRNA |
4217122 | 4217192 | + | 71 | 32470666 | RBt35 | - | 01 Gly tRNA |
4217195 | 4217269 | + | 75 | 32470666 | RBt36 | - | 12 Thr tRNA |
4218751 | 4218823 | + | 73 | 32470666 | RBt37 | - | 20 Trp tRNA |
4355716 | 4355788 | + | 73 | 32470666 | RBt38 | - | 04 Glu tRNA |
4611203 | 4611312 | - | 110 | 32470666 | RBr01 | - | 5S ribosomal RNA |
4611420 | 4614312 | - | 2893 | 32470666 | RBr02 | - | 23S ribosomal RNA |
4615129 | 4615201 | - | 73 | 32470666 | RBt39 | - | 02 Ala tRNA |
4615279 | 4615352 | - | 74 | 32470666 | RBt40 | - | 14 Ile tRNA |
4667213 | 4667295 | + | 83 | 32470666 | RBt41 | - | 08 Ser tRNA |
4745532 | 4745616 | - | 85 | 32470666 | RBt42 | - | 15 Leu tRNA |
5076964 | 5078478 | - | 1515 | 32470666 | RBr03 | - | 16S ribosomal RNA |
5267340 | 5267412 | - | 73 | 32470666 | RBt43 | - | 07 Asn tRNA |
5343020 | 5343101 | - | 82 | 32470666 | RBt44 | - | 15 Leu tRNA |
5811610 | 5811682 | - | 73 | 32470666 | RBt45 | - | 17 Phe tRNA |
5858391 | 5858464 | - | 74 | 32470666 | RBt46 | - | 11 Arg tRNA |
5880607 | 5880681 | + | 75 | 32470666 | RBt47 | - | |
6197615 | 6197685 | - | 71 | 32470666 | RB11437 | - | |
6198097 | 6198169 | - | 73 | 32470666 | RBt48 | - | |
6198373 | 6198444 | - | 72 | 32470666 | RBt49 | - | 11 Arg tRNA |
6198644 | 6198714 | - | 71 | 32470666 | RBt50 | - | |
6198726 | 6198798 | - | 73 | 32470666 | RBt51 | - | 13 Val tRNA |
6198809 | 6198884 | - | 76 | 32470666 | RBt52 | - | 15 Leu tRNA |
6199058 | 6199141 | - | 84 | 32470666 | RBt53 | - | 15 Leu tRNA |
6199155 | 6199228 | - | 74 | 32470666 | RBt54 | - | 15 Leu tRNA |
6199241 | 6199312 | - | 72 | 32470666 | RBt55 | - | 15 Leu tRNA |
6199318 | 6199388 | - | 71 | 32470666 | RBt56 | - | 02 Ala tRNA |
6199407 | 6199480 | - | 74 | 32470666 | RBt57 | - | 15 Leu tRNA |
6199865 | 6199936 | - | 72 | 32470666 | RBt58 | - | 13 Val tRNA |
6199956 | 6200026 | - | 71 | 32470666 | RBt59 | - | 20 Trp tRNA |
6200255 | 6200329 | - | 75 | 32470666 | RBt60 | - | 04 Glu tRNA |
6200602 | 6200675 | - | 74 | 32470666 | RBt61 | - | |
6200692 | 6200766 | - | 75 | 32470666 | RBt62 | - | 05 Gln tRNA |
6200873 | 6200944 | - | 72 | 32470666 | RBt63 | - | 01 Gly tRNA |
6201030 | 6201101 | - | 72 | 32470666 | RBt64 | - | 07 Asn tRNA |
6201110 | 6201180 | - | 71 | 32470666 | RBt65 | - | 01 Gly tRNA |
6201233 | 6201304 | - | 72 | 32470666 | RBt66 | - | 02 Ala tRNA |
6201325 | 6201397 | - | 73 | 32470666 | RBt67 | - | 10 Lys tRNA |
6201475 | 6201547 | - | 73 | 32470666 | RBt68 | - | 14 Ile tRNA |
6201559 | 6201631 | - | 73 | 32470666 | RBt69 | - | 10 Lys tRNA |
6201799 | 6201871 | - | 73 | 32470666 | RBt70 | - | 03 Pro tRNA |
6238009 | 6238082 | - | 74 | 32470666 | RBt71 | - | 16 Met tRNA |
6260778 | 6260850 | + | 73 | 32470666 | RBt72 | - | 19 Cys tRNA |
6260960 | 6261032 | + | 73 | 32470666 | RBt73 | - | 10 Lys tRNA |
6554248 | 6554592 | - | 345 | 32470666 | RBs01 | - | RibonucleaseP RNA |
6578179 | 6578252 | + | 74 | 32470666 | RBt74 | - | 13 Val tRNA |
6988936 | 6989010 | + | 75 | 32470666 | RBt75 | - | 03 Pro tRNA |