Геном прокариот/Материалы:NC 005861
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Базовый уровень статей |
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LOCUS NC_005861 2414465 bp DNA circular BCT 19-DEC-2005
DEFINITION Candidatus Protochlamydia amoebophila UWE25, complete genome.
ACCESSION NC_005861
VERSION NC_005861.1 GI:46445634
KEYWORDS complete genome.
SOURCE Candidatus Protochlamydia amoebophila UWE25
ORGANISM Candidatus Protochlamydia amoebophila UWE25
Bacteria; Chlamydiae; Chlamydiales; Parachlamydiaceae; Candidatus
Protochlamydia.
REFERENCE 1 (bases 1 to 2414465)
AUTHORS Horn,M., Collingro,A., Schmitz-Esser,S., Beier,C.L., Purkhold,U.,
Fartmann,B., Brandt,P., Nyakatura,G.J., Droege,M., Frishman,D.,
Rattei,T., Mewes,H.W. and Wagner,M.
TITLE Illuminating the evolutionary history of chlamydiae
JOURNAL Science 304 (5671), 728-730 (2004)
PUBMED 15073324
REFERENCE 2 (bases 1 to 2414465)
AUTHORS .
CONSRTM NCBI Genome Project
TITLE Direct Submission
JOURNAL Submitted (21-APR-2004) National Center for Biotechnology
Information, NIH, Bethesda, MD 20894, USA
REFERENCE 3 (bases 1 to 2414465)
AUTHORS Horn,M., Collingro,A., Schmitz-Esser,S., Beier,C.L., Purkhold,U.,
Fartmann,B., Brandt,P., Nyakatura,G.J., Droege,M., Frishman,D.,
Rattei,T., Mewes,H. and Wagner,M.
TITLE Direct Submission
JOURNAL Submitted (15-JAN-2003) Submitted by Matthias Horn, Department of
Microbial Ecology, University of Vienna, Althanstr. 14, A-1090
Wien, Austria, Email: horn@microbial-ecology.net Complete
annotation available at: http://mips.gsf.de/services/genomes/uwe25
COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final
NCBI review. The reference sequence was derived from BX908798.
COMPLETENESS: full length.
Расположение РНК
[править]| Начало | Конец | Направление | Длина | PID | Ген | COG | Комментарий |
|---|---|---|---|---|---|---|---|
| 37322 | 37395 | - | 74 | 46445634 | pct01 | - | Anticodon: ACG |
| 128380 | 128452 | + | 73 | 46445634 | pct02 | - | Anticodon: GGC |
| 208862 | 208932 | + | 71 | 46445634 | pct03 | - | Anticodon: TCC |
| 310157 | 310229 | + | 73 | 46445634 | pct04 | - | Anticodon: GAA |
| 435123 | 435196 | - | 74 | 46445634 | pct05 | - | Anticodon: CCT |
| 442137 | 442220 | - | 84 | 46445634 | pct06 | - | Anticodon: CAG |
| 450594 | 450676 | + | 83 | 46445634 | pct07 | - | Anticodon: CAA |
| 463504 | 463576 | - | 73 | 46445634 | pct08 | - | Anticodon: TCG |
| 464404 | 464487 | + | 84 | 46445634 | pct09 | - | Anticodon: GAG |
| 486773 | 486845 | - | 73 | 46445634 | pct10 | - | Anticodon: TCT |
| 566025 | 566108 | + | 84 | 46445634 | pct11 | - | Anticodon: TAA |
| 606996 | 607069 | - | 74 | 46445634 | pct12 | - | Anticodon: GTG |
| 641151 | 641223 | + | 73 | 46445634 | pct13 | - | Anticodon: CAT |
| 732847 | 732918 | + | 72 | 46445634 | pct14 | - | Anticodon: GGT |
| 734222 | 734294 | + | 73 | 46445634 | pct15 | - | Anticodon: CCA |
| 768930 | 769017 | - | 88 | 46445634 | pct16 | - | Anticodon: TGA |
| 853577 | 853650 | + | 74 | 46445634 | pct17 | - | Anticodon: GAC |
| 878495 | 878576 | + | 82 | 46445634 | pct18 | - | Anticodon: TAG |
| 958032 | 958105 | - | 74 | 46445634 | pct19 | - | Anticodon: GTC |
| 958118 | 958190 | - | 73 | 46445634 | pct20 | - | Anticodon: TAC |
| 1013700 | 1013772 | + | 73 | 46445634 | pct21 | - | Anticodon: CAT |
| 1013785 | 1013857 | + | 73 | 46445634 | pct22 | - | Anticodon: CAT |
| 1039856 | 1039937 | - | 82 | 46445634 | pct23 | - | Anticodon: GTA |
| 1039951 | 1040023 | - | 73 | 46445634 | pct24 | - | Anticodon: TGT |
| 1227275 | 1227391 | - | 117 | 46445634 | pcr01 | - | 5S ribosomal RNA |
| 1227524 | 1230471 | - | 2948 | 46445634 | pcr02 | - | 23S ribosomal RNA |
| 1230812 | 1232292 | - | 1481 | 46445634 | pcr03 | - | 16S ribosomal RNA |
| 1296930 | 1297004 | + | 75 | 46445634 | pct25 | - | Anticodon: TGG |
| 1408186 | 1408257 | + | 72 | 46445634 | pct26 | - | Anticodon: GTT |
| 1499806 | 1499877 | + | 72 | 46445634 | pct27 | - | Anticodon: GCA |
| 1648172 | 1648243 | + | 72 | 46445634 | pct28 | - | Anticodon: GCC |
| 1648332 | 1648403 | + | 72 | 46445634 | pct29 | - | Anticodon: GCC |
| 1857631 | 1857747 | - | 117 | 46445634 | pcr04 | - | 5S ribosomal RNA |
| 1857880 | 1858685 | - | 806 | 46445634 | pcr05 | - | 23S ribosomal RNA |
| 1858686 | 1859583 | - | 898 | 46445634 | pcr06 | - | 16S ribosomal RNA |
| 1910152 | 1910223 | - | 72 | 46445634 | pct30 | - | Anticodon: TTG |
| 2127797 | 2127913 | - | 117 | 46445634 | pcr07 | - | 5S ribosomal RNA |
| 2128046 | 2130993 | - | 2948 | 46445634 | pcr08 | - | 23S ribosomal RNA |
| 2131334 | 2132814 | - | 1481 | 46445634 | pcr09 | - | 16S ribosomal RNA |
| 2160172 | 2160259 | - | 88 | 46445634 | pct31 | - | Anticodon: GCT |
| 2164508 | 2164595 | + | 88 | 46445634 | pct32 | - | Anticodon: GGA |
| 2236176 | 2236249 | - | 74 | 46445634 | pct33 | - | Anticodon: TTT |
| 2236254 | 2236328 | - | 75 | 46445634 | pct34 | - | Anticodon: TTC |
| 2387508 | 2387582 | - | 75 | 46445634 | pct35 | - | Anticodon: GGG |