Геном прокариот/Материалы:NC 006958
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Базовый уровень статей |
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LOCUS NC_006958 3282708 bp DNA circular BCT 08-AUG-2007
DEFINITION Corynebacterium glutamicum ATCC 13032, complete genome.
ACCESSION NC_006958
VERSION NC_006958.1 GI:62388892
KEYWORDS complete genome.
SOURCE Corynebacterium glutamicum ATCC 13032
ORGANISM Corynebacterium glutamicum ATCC 13032
Bacteria; Actinobacteria; Actinobacteridae; Actinomycetales;
Corynebacterineae; Corynebacteriaceae; Corynebacterium.
REFERENCE 1 (bases 1 to 3282708)
AUTHORS Kalinowski,J., Bathe,B., Bartels,D., Bischoff,N., Bott,M.,
Burkovski,A., Dusch,N., Eggeling,L., Eikmanns,B.J., Gaigalat,L.,
Goesmann,A., Hartmann,M., Huthmacher,K., Kramer,R., Linke,B.,
McHardy,A.C., Meyer,F., Mockel,B., Pfefferle,W., Puhler,A.,
Rey,D.A., Ruckert,C., Rupp,O., Sahm,H., Wendisch,V.F., Wiegrabe,I.
and Tauch,A.
TITLE The complete Corynebacterium glutamicum ATCC 13032 genome sequence
and its impact on the production of L-aspartate-derived amino acids
and vitamins
JOURNAL J. Biotechnol. 104 (1-3), 5-25 (2003)
PUBMED 12948626
REFERENCE 2 (bases 1 to 3282708)
CONSRTM NCBI Genome Project
TITLE Direct Submission
JOURNAL Submitted (07-APR-2005) National Center for Biotechnology
Information, NIH, Bethesda, MD 20894, USA
REFERENCE 3 (bases 1 to 3282708)
AUTHORS Kalinowski,J.
TITLE Direct Submission
JOURNAL Submitted (21-JAN-2004) Institut fuer Genomforschung, Universitaet
Bielefeld, Universitaetsstrasse 25, Bielefeld 33615, Germany
COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final
NCBI review. The reference sequence was derived from BX927147.
COMPLETENESS: full length.
Расположение РНК
[править]| Начало | Конец | Направление | Длина | PID | Ген | COG | Комментарий |
|---|---|---|---|---|---|---|---|
| 14851 | 14927 | + | 77 | 62388892 | cgtRNA_3528 | - | Anticodon: GAT |
| 14939 | 15011 | + | 73 | 62388892 | cgtRNA_3529 | - | Anticodon: TGC |
| 23500 | 23572 | + | 73 | 62388892 | cgtRNA_3530 | - | Anticodon: TGC |
| 23903 | 23979 | + | 77 | 62388892 | cgtRNA_3531 | - | Anticodon: GAT |
| 23991 | 24063 | + | 73 | 62388892 | cgtRNA_3532 | - | Anticodon: TGC |
| 49705 | 49791 | + | 87 | 62388892 | cgtRNA_3533 | - | Anticodon: CAG |
| 76639 | 78175 | + | 1537 | 62388892 | cgr01 | - | 16S ribosomal RNA |
| 78553 | 81664 | + | 3112 | 62388892 | cgr02 | - | 23S ribosomal RNA |
| 80063 | 80171 | + | 109 | 62388892 | cgr02 | - | 23S ribosomal RNA intervening sequence |
| 81755 | 81875 | + | 121 | 62388892 | cgr03 | - | 5S ribosomal RNA |
| 221751 | 221838 | + | 88 | 62388892 | cgtRNA_3534 | - | Anticodon: TGA |
| 233410 | 233498 | + | 89 | 62388892 | cgtRNA_3535 | - | Anticodon: GCT |
| 233528 | 233603 | + | 76 | 62388892 | cgtRNA_3536 | - | Anticodon: ACG |
| 241638 | 241710 | + | 73 | 62388892 | cgtRNA_3537 | - | Anticodon: ACG |
| 244295 | 244385 | + | 91 | 62388892 | cgtRNA_3538 | - | Anticodon: CGA |
| 256223 | 256310 | - | 88 | 62388892 | cgtRNA_3539 | - | Anticodon: GGA |
| 292466 | 292542 | - | 77 | 62388892 | cgtRNA_3540 | - | Anticodon: CGG |
| 329630 | 329705 | + | 76 | 62388892 | cgtRNA_3541 | - | Anticodon: CGT |
| 495198 | 495283 | + | 86 | 62388892 | cgtRNA_3542 | - | Anticodon: GTA |
| 495903 | 495975 | + | 73 | 62388892 | cgtRNA_3543 | - | Anticodon: GGT |
| 496228 | 496300 | + | 73 | 62388892 | cgtRNA_3544 | - | Anticodon: GGT |
| 496339 | 496413 | + | 75 | 62388892 | cgtRNA_3545 | - | Anticodon: CAT |
| 496507 | 496582 | + | 76 | 62388892 | cgtRNA_3546 | - | Anticodon: CCA |
| 834140 | 834216 | + | 77 | 62388892 | cgtRNA_3547 | - | Anticodon: CAT |
| 848547 | 848922 | + | 376 | 62388892 | cgs01 | - | tmRNA |
| 849823 | 849899 | + | 77 | 62388892 | cgtRNA_3548 | - | Anticodon: CAT |
| 857584 | 859121 | + | 1538 | 62388892 | cgr04 | - | 16S ribosomal RNA |
| 859501 | 862603 | + | 3103 | 62388892 | cgr05 | - | 23S ribosomal RNA |
| 861011 | 861119 | + | 109 | 62388892 | cgr05 | - | 23S ribosomal RNA intervening sequence |
| 862694 | 862814 | + | 121 | 62388892 | cgr06 | - | 5S ribosomal RNA |
| 898698 | 898773 | - | 76 | 62388892 | cgtRNA_3549 | - | Anticodon: CCT |
| 1019721 | 1019795 | - | 75 | 62388892 | cgtRNA_3550 | - | Anticodon: TTG |
| 1039983 | 1040059 | + | 77 | 62388892 | cgtRNA_3551 | - | Anticodon: TAA |
| 1237864 | 1237936 | - | 73 | 62388892 | cgtRNA_3552 | - | Anticodon: CCG |
| 1367060 | 1367131 | + | 72 | 62388892 | cgtRNA_3553 | - | Anticodon: CTG |
| 1367170 | 1367242 | + | 73 | 62388892 | cgtRNA_3554 | - | Anticodon: CTC |
| 1367309 | 1367380 | + | 72 | 62388892 | cgtRNA_3555 | - | Anticodon: CTG |
| 1367418 | 1367490 | + | 73 | 62388892 | cgtRNA_3556 | - | Anticodon: CTC |
| 1369040 | 1369115 | + | 76 | 62388892 | cgtRNA_3557 | - | Anticodon: CTC |
| 1415032 | 1415108 | - | 77 | 62388892 | cgtRNA_3558 | - | Anticodon: CAA |
| 1480826 | 1482362 | + | 1537 | 62388892 | cgr07 | - | 16S ribosomal RNA |
| 1482742 | 1485852 | + | 3111 | 62388892 | cgr08 | - | 23S ribosomal RNA |
| 1484251 | 1484359 | + | 109 | 62388892 | cgr08 | - | 23S ribosomal RNA intervening sequence |
| 1485943 | 1486063 | + | 121 | 62388892 | cgr09 | - | 5S ribosomal RNA |
| 1516690 | 1516766 | - | 77 | 62388892 | cgtRNA_3559 | - | Anticodon: GGG |
| 1610889 | 1610974 | + | 86 | 62388892 | cgtRNA_3560 | - | Anticodon: GAG |
| 1611061 | 1611149 | + | 89 | 62388892 | cgtRNA_3561 | - | Anticodon: GAG |
| 1777145 | 1777220 | - | 76 | 62388892 | cgtRNA_3562 | - | Anticodon: GCC |
| 1777254 | 1777328 | - | 75 | 62388892 | cgtRNA_3563 | - | Anticodon: GAC |
| 1777339 | 1777409 | - | 71 | 62388892 | cgtRNA_3564 | - | Anticodon: GCA |
| 1777451 | 1777523 | - | 73 | 62388892 | cgtRNA_3565 | - | Anticodon: GCC |
| 1777557 | 1777631 | - | 75 | 62388892 | cgtRNA_3566 | - | Anticodon: GAC |
| 1777665 | 1777737 | - | 73 | 62388892 | cgtRNA_3567 | - | Anticodon: GCC |
| 1778085 | 1778156 | + | 72 | 62388892 | cgtRNA_3568 | - | Anticodon: CAC |
| 2342592 | 2342987 | - | 396 | 62388892 | cgs02 | - | RNase P |
| 2350366 | 2350441 | - | 76 | 62388892 | cgtRNA_3569 | - | Anticodon: TAC |
| 2366664 | 2366740 | - | 77 | 62388892 | cgtRNA_3570 | - | Anticodon: CAT |
| 2368522 | 2368597 | + | 76 | 62388892 | cgtRNA_3571 | - | Anticodon: GTT |
| 2368733 | 2368808 | + | 76 | 62388892 | cgtRNA_3572 | - | Anticodon: GTT |
| 2529899 | 2529972 | - | 74 | 62388892 | cgtRNA_3573 | - | Anticodon: TGG |
| 2532281 | 2532355 | - | 75 | 62388892 | cgtRNA_3574 | - | Anticodon: TCC |
| 2572697 | 2572773 | + | 77 | 62388892 | cgtRNA_3575 | - | Anticodon: TCT |
| 2574634 | 2574709 | + | 76 | 62388892 | cgtRNA_3576 | - | Anticodon: GTG |
| 2594322 | 2594397 | + | 76 | 62388892 | cgtRNA_3577 | - | Anticodon: CTT |
| 2594485 | 2594557 | + | 73 | 62388892 | cgtRNA_3578 | - | Anticodon: CTT |
| 2621918 | 2622002 | - | 85 | 62388892 | cgtRNA_3579 | - | Anticodon: TAG |
| 2658899 | 2658974 | - | 76 | 62388892 | cgtRNA_3580 | - | Anticodon: GGC |
| 2675385 | 2675505 | - | 121 | 62388892 | cgr10 | - | 5S ribosomal RNA |
| 2675621 | 2678707 | - | 3087 | 62388892 | cgr11 | - | 23S ribosomal RNA |
| 2677092 | 2677200 | - | 109 | 62388892 | cgr11 | - | 23S ribosomal RNA intervening sequence |
| 2679098 | 2680621 | - | 1524 | 62388892 | cgr12 | - | 16S ribosomal RNA |
| 2684251 | 2684371 | - | 121 | 62388892 | cgr13 | - | 5S ribosomal RNA |
| 2684487 | 2687571 | - | 3085 | 62388892 | cgr14 | - | 23S ribosomal RNA |
| 2685958 | 2686066 | - | 109 | 62388892 | cgr14 | - | 23S ribosomal RNA intervening sequence |
| 2687962 | 2689485 | - | 1524 | 62388892 | cgr15 | - | 16S ribosomal RNA |
| 2695845 | 2695920 | - | 76 | 62388892 | cgtRNA_3581 | - | Anticodon: GAA |
| 2695953 | 2696026 | - | 74 | 62388892 | cgtRNA_3582 | - | Anticodon: GTC |
| 2698749 | 2698822 | - | 74 | 62388892 | cgtRNA_3583 | - | Anticodon: GTC |
| 2698861 | 2698936 | - | 76 | 62388892 | cgtRNA_3584 | - | Anticodon: TTC |
| 2700806 | 2700878 | - | 73 | 62388892 | cgtRNA_3585 | - | Anticodon: TTT |
| 2764068 | 2764143 | - | 76 | 62388892 | cgtRNA_3586 | - | Anticodon: TGT |
| 3010857 | 3010930 | + | 74 | 62388892 | cgtRNA_3587 | - | Anticodon: CCC |
| 3119277 | 3119397 | - | 121 | 62388892 | cgr16 | - | 5S ribosomal RNA |
| 3119509 | 3122594 | - | 3086 | 62388892 | cgr17 | - | 23S ribosomal RNA |
| 3120980 | 3121088 | - | 109 | 62388892 | cgr17 | - | 23S ribosomal RNA intervening sequence |
| 3122985 | 3124508 | - | 1524 | 62388892 | cgr18 | - | 16S ribosomal RNA |