Геном прокариот/Материалы:NC 007168
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Базовый уровень статей |
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LOCUS NC_007168 2685015 bp DNA circular BCT 26-JAN-2007
DEFINITION Staphylococcus haemolyticus JCSC1435, complete genome.
ACCESSION NC_007168
VERSION NC_007168.1 GI:70725001
KEYWORDS .
SOURCE Staphylococcus haemolyticus JCSC1435
ORGANISM Staphylococcus haemolyticus JCSC1435
Bacteria; Firmicutes; Bacillales; Staphylococcus.
REFERENCE 1 (bases 1 to 2685015)
AUTHORS Takeuchi,F., Watanabe,S., Baba,T., Yuzawa,H., Ito,T., Morimoto,Y.,
Kuroda,M., Cui,L., Takahashi,M., Ankai,A., Baba,S., Fukui,S.,
Lee,J.C. and Hiramatsu,K.
TITLE Whole-genome sequencing of staphylococcus haemolyticus uncovers the
extreme plasticity of its genome and the evolution of
human-colonizing staphylococcal species
JOURNAL J. Bacteriol. 187 (21), 7292-7308 (2005)
PUBMED 16237012
REFERENCE 2 (bases 1 to 2685015)
CONSRTM NCBI Genome Project
TITLE Direct Submission
JOURNAL Submitted (04-JUL-2005) National Center for Biotechnology
Information, NIH, Bethesda, MD 20894, USA
REFERENCE 3 (bases 1 to 2685015)
AUTHORS Takahashi,M., Fukui,S., Baba,S., Ankai,A., Terui,Y., Fukuhara,Y.,
Oguchi,A., Hongo,Y., Yanagi-i,M., Watanabe,S., Takeuchi,F.,
Kuroda,M., Ito,T., Cui,L., Ma,X., Morimoto,Y., Yuzawa,H., Baba,T.,
Hiramatsu,K. and Isono,K.
TITLE Direct Submission
JOURNAL Submitted (19-DEC-2003) Mikio Takahashi, National Institute of
Technology and Evaluation, Bio Technology Division Tohoku Branch;
4-5-18 Higashisendai Miyagino-ku, Sendai, Miyagi, 983-0833, Japan
(E-mail:takahashi-mikio@nite.go.jp, URL:http://www.bio.nite.go.jp,
Tel:81-22-256-6494, Fax:81-22-256-6434)
COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final
NCBI review. The reference sequence was derived from AP006716.
COMPLETENESS: full length.
Расположение РНК
[править]| Начало | Конец | Направление | Длина | PID | Ген | COG | Комментарий |
|---|---|---|---|---|---|---|---|
| 22500 | 22574 | + | 75 | 70725001 | SHtRNA01 | - | Anticodon: TTC |
| 22581 | 22653 | + | 73 | 70725001 | SHtRNA02 | - | Anticodon: GTC |
| 879834 | 881387 | + | 1554 | 70725001 | SHrRNA01 | - | 16S RIBOSOMAL RNA |
| 881725 | 884557 | + | 2833 | 70725001 | SHrRNA02 | - | 23S RIBOSOMAL RNA |
| 884718 | 884832 | + | 115 | 70725001 | SHrRNA03 | - | 5S RIBOSOMAL RNA |
| 884845 | 884919 | + | 75 | 70725001 | SHtRNA03 | - | Anticodon: GTT |
| 884921 | 884995 | + | 75 | 70725001 | SHtRNA04 | - | Anticodon: TTC |
| 885001 | 885076 | + | 76 | 70725001 | SHtRNA05 | - | Anticodon: TAC |
| 885087 | 885170 | + | 84 | 70725001 | SHtRNA06 | - | Anticodon: GTA |
| 885177 | 885251 | + | 75 | 70725001 | SHtRNA07 | - | Anticodon: TTG |
| 885255 | 885327 | + | 73 | 70725001 | SHtRNA08 | - | Anticodon: TTT |
| 970891 | 970976 | + | 86 | 70725001 | SHtRNA09 | - | Anticodon: GAG |
| 970988 | 971071 | + | 84 | 70725001 | SHtRNA10 | - | Anticodon: TCC |
| 971185 | 972738 | + | 1554 | 70725001 | SHrRNA04 | - | 16S RIBOSOMAL RNA |
| 973177 | 976009 | + | 2833 | 70725001 | SHrRNA05 | - | 23S RIBOSOMAL RNA |
| 976170 | 976284 | + | 115 | 70725001 | SHrRNA06 | - | 5S RIBOSOMAL RNA |
| 1103122 | 1104675 | + | 1554 | 70725001 | SHrRNA07 | - | 16S RIBOSOMAL RNA |
| 1104767 | 1104843 | + | 77 | 70725001 | SHtRNA11 | - | Anticodon: GAT |
| 1104861 | 1104936 | + | 76 | 70725001 | SHtRNA12 | - | Anticodon: TGC |
| 1105127 | 1107959 | + | 2833 | 70725001 | SHrRNA08 | - | 23S RIBOSOMAL RNA |
| 1108120 | 1108234 | + | 115 | 70725001 | SHrRNA09 | - | 5S RIBOSOMAL RNA |
| 1108245 | 1108320 | + | 76 | 70725001 | SHtRNA13 | - | Anticodon: TAC |
| 1108341 | 1108416 | + | 76 | 70725001 | SHtRNA14 | - | Anticodon: TGT |
| 1108425 | 1108497 | + | 73 | 70725001 | SHtRNA15 | - | Anticodon: TTT |
| 1108507 | 1108588 | + | 82 | 70725001 | SHtRNA16 | - | Anticodon: TAG |
| 1108592 | 1108666 | + | 75 | 70725001 | SHtRNA17 | - | Anticodon: GCC |
| 1108683 | 1108771 | + | 89 | 70725001 | SHtRNA18 | - | Anticodon: TAA |
| 1108783 | 1108856 | + | 74 | 70725001 | SHtRNA19 | - | Anticodon: ACG |
| 1108865 | 1108938 | + | 74 | 70725001 | SHtRNA20 | - | Anticodon: TGG |
| 1108966 | 1109041 | + | 76 | 70725001 | SHtRNA21 | - | Anticodon: TGC |
| 1109066 | 1109139 | + | 74 | 70725001 | SHtRNA22 | - | Anticodon: CAT |
| 1109168 | 1109241 | + | 74 | 70725001 | SHtRNA23 | - | Anticodon: CAT |
| 1109251 | 1109340 | + | 90 | 70725001 | SHtRNA24 | - | Anticodon: TGA |
| 1109350 | 1109425 | + | 76 | 70725001 | SHtRNA25 | - | Anticodon: GTC |
| 1109461 | 1109553 | + | 93 | 70725001 | SHtRNA26 | - | Anticodon: TGA |
| 1109565 | 1109638 | + | 74 | 70725001 | SHtRNA27 | - | Anticodon: CAT |
| 1109650 | 1109725 | + | 76 | 70725001 | SHtRNA28 | - | Anticodon: GTC |
| 1109737 | 1109809 | + | 73 | 70725001 | SHtRNA29 | - | Anticodon: GAA |
| 1109819 | 1109894 | + | 76 | 70725001 | SHtRNA30 | - | Anticodon: TGT |
| 1109901 | 1109984 | + | 84 | 70725001 | SHtRNA31 | - | Anticodon: GTA |
| 1109994 | 1110067 | + | 74 | 70725001 | SHtRNA32 | - | Anticodon: CCA |
| 1110070 | 1110142 | + | 73 | 70725001 | SHtRNA33 | - | Anticodon: GTG |
| 1110157 | 1110228 | + | 72 | 70725001 | SHtRNA34 | - | Anticodon: TTG |
| 1110234 | 1110307 | + | 74 | 70725001 | SHtRNA35 | - | Anticodon: GCA |
| 1110316 | 1110389 | + | 74 | 70725001 | SHtRNA36 | - | Anticodon: TCC |
| 1110791 | 1110874 | + | 84 | 70725001 | SHtRNA37 | - | Anticodon: CAA |
| 1140574 | 1140647 | + | 74 | 70725001 | SHtRNA38 | - | Anticodon: CAT |
| 1140663 | 1140738 | + | 76 | 70725001 | SHtRNA39 | - | Anticodon: GTC |
| 1140750 | 1140822 | + | 73 | 70725001 | SHtRNA40 | - | Anticodon: GAA |
| 1140836 | 1140911 | + | 76 | 70725001 | SHtRNA41 | - | Anticodon: GTG |
| 1140926 | 1140999 | + | 74 | 70725001 | SHtRNA42 | - | Anticodon: TCC |
| 1141009 | 1141083 | + | 75 | 70725001 | SHtRNA43 | - | Anticodon: GTT |
| 1141085 | 1141156 | + | 72 | 70725001 | SHtRNA44 | - | Anticodon: TTC |
| 1141216 | 1141305 | + | 90 | 70725001 | SHtRNA45 | - | Anticodon: GGA |
| 1806733 | 1806806 | + | 74 | 70725001 | SHtRNA46 | - | Anticodon: TCT |
| 1974161 | 1974235 | + | 75 | 70725001 | SHtRNA47 | - | Anticodon: GTT |
| 1974239 | 1974327 | + | 89 | 70725001 | SHtRNA48 | - | Anticodon: GCT |
| 2133978 | 2134337 | - | 360 | 70725001 | SHtmRNA01 | - | |
| 2150749 | 2150820 | + | 72 | 70725001 | SHtRNA49 | - | Anticodon: CCG |
| 2495320 | 2495434 | - | 115 | 70725001 | SHrRNA10 | - | 5S RIBOSOMAL RNA |
| 2495595 | 2498427 | - | 2833 | 70725001 | SHrRNA11 | - | 23S RIBOSOMAL RNA |
| 2498618 | 2498694 | - | 77 | 70725001 | SHtRNA50 | - | Anticodon: GAT |
| 2498786 | 2500339 | - | 1554 | 70725001 | SHrRNA12 | - | 16S RIBOSOMAL RNA |
| 2500461 | 2500536 | - | 76 | 70725001 | SHtRNA51 | - | Anticodon: TGC |
| 2500552 | 2500625 | - | 74 | 70725001 | SHtRNA52 | - | Anticodon: TGG |
| 2500659 | 2500732 | - | 74 | 70725001 | SHtRNA53 | - | Anticodon: ACG |
| 2500744 | 2500832 | - | 89 | 70725001 | SHtRNA54 | - | Anticodon: TAA |
| 2500840 | 2500914 | - | 75 | 70725001 | SHtRNA55 | - | Anticodon: GCC |
| 2500938 | 2501010 | - | 73 | 70725001 | SHtRNA56 | - | Anticodon: TTT |
| 2501016 | 2501091 | - | 76 | 70725001 | SHtRNA57 | - | Anticodon: TGT |
| 2501106 | 2501181 | - | 76 | 70725001 | SHtRNA58 | - | Anticodon: TAC |
| 2501191 | 2501305 | - | 115 | 70725001 | SHrRNA13 | - | 5S RIBOSOMAL RNA |
| 2539030 | 2539144 | - | 115 | 70725001 | SHrRNA14 | - | 5S RIBOSOMAL RNA |
| 2539305 | 2542137 | - | 2833 | 70725001 | SHrRNA15 | - | 23S RIBOSOMAL RNA |
| 2542474 | 2544027 | - | 1554 | 70725001 | SHrRNA16 | - | 16S RIBOSOMAL RNA |
| 2552736 | 2552828 | - | 93 | 70725001 | SHtRNA59 | - | Anticodon: TGA |