Геном прокариот/Материалы:NC 007204
Внешний вид
Базовый уровень статей | |
LOCUS NC_007204 2650701 bp DNA circular BCT 18-JAN-2006 DEFINITION Psychrobacter arcticus 273-4, complete genome. ACCESSION NC_007204 VERSION NC_007204.1 GI:71064581 KEYWORDS . SOURCE Psychrobacter arcticus 273-4 ORGANISM Psychrobacter arcticus 273-4 Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Psychrobacter. REFERENCE 1 (bases 1 to 2650701) AUTHORS Ayala-del-Rio,H.L., Chain,P., Ponder,M.A., Di Bartolo,G., Ivanova,N., Bergholz,P.W., Hauser,L., Land,M., Bakermans,C., Rodrigues,D., Klappenbach,J.A., Zarka,D., Larimer,F., Richardson,P., Thomashow,M.F. and Tiedje,J.M. CONSRTM NASA Astrobiology Institute TITLE Complete sequence of Psychrobacter arcticus 273-4 JOURNAL Unpublished REFERENCE 2 (bases 1 to 2650701) AUTHORS . CONSRTM NCBI Genome Project TITLE Direct Submission JOURNAL Submitted (22-JUL-2005) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA REFERENCE 3 (bases 1 to 2650701) AUTHORS Copeland,A., Lucas,S., Lapidus,A., Barry,K., Detter,C., Glavina,T., Hammon,N., Israni,S., Chain,P., Di Bartolo,G., Ivanova,N., Hauser,L., Land,M., Larimer,F., Pitluck,S. and Richardson,P. TITLE Direct Submission JOURNAL Submitted (23-JUN-2005) US DOE Joint Genome Institute, USA COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from CP000082. COMPLETENESS: full length.
Расположение РНК
[править]Начало | Конец | Направление | Длина | PID | Ген | COG | Комментарий |
---|---|---|---|---|---|---|---|
74634 | 74717 | + | 84 | 71064581 | Psyc_R0001 | - | 15 Leu tRNA |
74842 | 74918 | + | 77 | 71064581 | Psyc_R0002 | - | 16 Met tRNA |
194905 | 194994 | + | 90 | 71064581 | Psyc_R0003 | - | 08 Ser tRNA |
195179 | 195255 | + | 77 | 71064581 | Psyc_R0004 | - | 11 Arg tRNA |
199763 | 199838 | - | 76 | 71064581 | Psyc_R0005 | - | 05 Gln tRNA |
200082 | 200157 | - | 76 | 71064581 | Psyc_R0006 | - | 05 Gln tRNA |
269965 | 270041 | + | 77 | 71064581 | Psyc_R0007 | - | 03 Pro tRNA |
270136 | 270212 | + | 77 | 71064581 | Psyc_R0008 | - | 11 Arg tRNA |
270252 | 270327 | + | 76 | 71064581 | Psyc_R0009 | - | 09 His tRNA |
408102 | 408403 | + | 302 | 71064581 | Psyc_R0010 | - | RNA component of RNaseP |
408595 | 408671 | + | 77 | 71064581 | Psyc_R0011 | - | 16 Met tRNA |
478244 | 478319 | + | 76 | 71064581 | Psyc_R0012 | - | 12 Thr tRNA |
478385 | 478468 | + | 84 | 71064581 | Psyc_R0013 | - | 18 Tyr tRNA |
478555 | 478628 | + | 74 | 71064581 | Psyc_R0014 | - | 01 Gly tRNA |
478733 | 478807 | + | 75 | 71064581 | Psyc_R0015 | - | 12 Thr tRNA |
531612 | 531688 | - | 77 | 71064581 | Psyc_R0016 | - | 11 Arg tRNA |
585389 | 585465 | - | 77 | 71064581 | Psyc_R0017 | - | 03 Pro tRNA |
660502 | 662086 | + | 1585 | 71064581 | Psyc_R0018 | - | 16S ribosomal RNA |
662172 | 662248 | + | 77 | 71064581 | Psyc_R0019 | - | 14 Ile tRNA |
662255 | 662330 | + | 76 | 71064581 | Psyc_R0020 | - | 02 Ala tRNA |
662680 | 665443 | + | 2764 | 71064581 | Psyc_R0021 | - | 23S ribosomal RNA |
665722 | 665823 | + | 102 | 71064581 | Psyc_R0022 | - | 5S ribosomal RNA |
674476 | 674551 | - | 76 | 71064581 | Psyc_R0023 | - | 10 Lys tRNA |
674708 | 674783 | - | 76 | 71064581 | Psyc_R0024 | - | 10 Lys tRNA |
856996 | 857071 | + | 76 | 71064581 | Psyc_R0025 | - | 13 Val tRNA |
857126 | 857202 | + | 77 | 71064581 | Psyc_R0026 | - | 06 Asp tRNA |
881169 | 881244 | - | 76 | 71064581 | Psyc_R0027 | - | 07 Asn tRNA |
1025594 | 1025668 | - | 75 | 71064581 | Psyc_R0028 | - | 01 Gly tRNA |
1060465 | 1060551 | - | 87 | 71064581 | Psyc_R0029 | - | 15 Leu tRNA |
1173782 | 1173895 | + | 114 | 71064581 | Psyc_R0030 | - | SRP RNA; RNA component of signal recognition particle |
1190834 | 1190909 | + | 76 | 71064581 | Psyc_R0031 | - | Xaa tRNA |
1353903 | 1353978 | + | 76 | 71064581 | Psyc_R0032 | - | 11 Arg tRNA |
1653280 | 1653356 | + | 77 | 71064581 | Psyc_R0033 | - | 16 Met tRNA |
1749931 | 1750004 | + | 74 | 71064581 | Psyc_R0034 | - | 19 Cys tRNA |
1750129 | 1750215 | + | 87 | 71064581 | Psyc_R0035 | - | 15 Leu tRNA |
1764256 | 1764614 | - | 359 | 71064581 | Psyc_R0036 | - | tmRNA |
1883491 | 1883575 | + | 85 | 71064581 | Psyc_R0037 | - | 15 Leu tRNA |
1902310 | 1902385 | + | 76 | 71064581 | Psyc_R0038 | - | 13 Val tRNA |
1902440 | 1902516 | + | 77 | 71064581 | Psyc_R0039 | - | 06 Asp tRNA |
1936394 | 1936470 | + | 77 | 71064581 | Psyc_R0040 | - | 13 Val tRNA |
1986862 | 1986937 | + | 76 | 71064581 | Psyc_R0041 | - | 07 Asn tRNA |
1987941 | 1988031 | - | 91 | 71064581 | Psyc_R0042 | - | 08 Ser tRNA |
2019984 | 2020059 | + | 76 | 71064581 | Psyc_R0043 | - | 04 Glu tRNA |
2195847 | 2195921 | - | 75 | 71064581 | Psyc_R0044 | - | 01 Gly tRNA |
2337947 | 2338022 | - | 76 | 71064581 | Psyc_R0045 | - | 20 Trp tRNA |
2420420 | 2420533 | - | 114 | 71064581 | Psyc_R0046 | - | 5S ribosomal RNA |
2420812 | 2423575 | - | 2764 | 71064581 | Psyc_R0047 | - | 23S ribosomal RNA |
2423925 | 2424000 | - | 76 | 71064581 | Psyc_R0048 | - | 02 Ala tRNA |
2424007 | 2424083 | - | 77 | 71064581 | Psyc_R0049 | - | 14 Ile tRNA |
2424144 | 2425753 | - | 1610 | 71064581 | Psyc_R0050 | - | 16S ribosomal RNA |
2517802 | 2517892 | + | 91 | 71064581 | Psyc_R0051 | - | 08 Ser tRNA |
2532760 | 2532835 | + | 76 | 71064581 | Psyc_R0052 | - | 02 Ala tRNA |
2532993 | 2533068 | + | 76 | 71064581 | Psyc_R0053 | - | 04 Glu tRNA |
2579869 | 2579982 | - | 114 | 71064581 | Psyc_R0054 | - | 5S ribosomal RNA |
2580261 | 2583024 | - | 2764 | 71064581 | Psyc_R0055 | - | 23S ribosomal RNA |
2583374 | 2583449 | - | 76 | 71064581 | Psyc_R0056 | - | 02 Ala tRNA |
2583456 | 2583532 | - | 77 | 71064581 | Psyc_R0057 | - | 14 Ile tRNA |
2583593 | 2585202 | - | 1610 | 71064581 | Psyc_R0058 | - | 16S ribosomal RNA |
2585975 | 2586088 | - | 114 | 71064581 | Psyc_R0059 | - | 5S ribosomal RNA |
2586367 | 2589130 | - | 2764 | 71064581 | Psyc_R0060 | - | 23S ribosomal RNA |
2589480 | 2589555 | - | 76 | 71064581 | Psyc_R0061 | - | 02 Ala tRNA |
2589562 | 2589638 | - | 77 | 71064581 | Psyc_R0062 | - | 14 Ile tRNA |
2589699 | 2591308 | - | 1610 | 71064581 | Psyc_R0063 | - | 16S ribosomal RNA |
2621213 | 2621288 | + | 76 | 71064581 | Psyc_R0064 | - | 17 Phe tRNA |