Геном прокариот/Материалы:NC 007705
Внешний вид
Базовый уровень статей | |
LOCUS NC_007705 4940217 bp DNA circular BCT 30-MAR-2006 DEFINITION Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome. ACCESSION NC_007705 VERSION NC_007705.1 GI:84621657 KEYWORDS . SOURCE Xanthomonas oryzae pv. oryzae MAFF 311018 ORGANISM Xanthomonas oryzae pv. oryzae MAFF 311018 Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas. REFERENCE 1 AUTHORS Ochiai,H., Inoue,Y., Takeya,M., Sasaki,A. and Kaku,H. TITLE Genome sequence of Xanthomonas oryzae pv. oryzae suggests contribution of large numbers of effector genes and insertion sequences to its race diversity JOURNAL JARQ 39, 275-287 (2005) REFERENCE 2 (bases 1 to 4940217) CONSRTM NCBI Genome Project TITLE Direct Submission JOURNAL Submitted (09-JAN-2006) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA REFERENCE 3 (bases 1 to 4940217) AUTHORS Ochiai,H., Inoue,Y., Takeya,M., Sasaki,A. and Kaku,H. TITLE Direct Submission JOURNAL Submitted (16-NOV-2004) Hirokazu Ochiai, National Institute of Agrobiological Sciences, Genetic Diversity; 2-1-2 Kannondai, Tsukuba, Ibaraki 305-8602, Japan (E-mail:ochiaih@nias.affrc.go.jp, Tel:81-29-838-7452, Fax:81-29-838-7451) COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from AP008229. COMPLETENESS: full length.
Расположение РНК
[править]Начало | Конец | Направление | Длина | PID | Ген | COG | Комментарий |
---|---|---|---|---|---|---|---|
293626 | 295175 | + | 1550 | 84621657 | XOO_r01 | - | 16S ribosomal RNA |
295269 | 295344 | + | 76 | 84621657 | XOO_r02 | - | 02 Ala tRNA |
295364 | 295440 | + | 77 | 84621657 | XOO_r03 | - | 14 Ile tRNA |
295668 | 298590 | + | 2923 | 84621657 | XOO_r04 | - | 23S ribosomal RNA |
298722 | 298840 | + | 119 | 84621657 | XOO_r05 | - | 5S ribosomal RNA |
426679 | 426754 | + | 76 | 84621657 | XOO_r06 | - | 12 Thr tRNA |
448446 | 448522 | - | 77 | 84621657 | XOO_r07 | - | 11 Arg tRNA |
520867 | 522416 | + | 1550 | 84621657 | XOO_r08 | - | 16S ribosomal RNA |
522510 | 522585 | + | 76 | 84621657 | XOO_r09 | - | 02 Ala tRNA |
522605 | 522681 | + | 77 | 84621657 | XOO_r10 | - | 14 Ile tRNA |
522909 | 525831 | + | 2923 | 84621657 | XOO_r11 | - | 23S ribosomal RNA |
525963 | 526081 | + | 119 | 84621657 | XOO_r12 | - | 5S ribosomal RNA |
613808 | 613883 | + | 76 | 84621657 | XOO_r13 | - | 16 Met tRNA |
881935 | 882009 | + | 75 | 84621657 | XOO_r14 | - | 13 Val tRNA |
1012227 | 1012303 | + | 77 | 84621657 | XOO_r15 | - | 03 Pro tRNA |
1012346 | 1012422 | + | 77 | 84621657 | XOO_r16 | - | 11 Arg tRNA |
1012455 | 1012531 | + | 77 | 84621657 | XOO_r17 | - | 09 His tRNA |
1012625 | 1012700 | + | 76 | 84621657 | XOO_r18 | - | 10 Lys tRNA |
1015106 | 1015190 | + | 85 | 84621657 | XOO_r19 | - | 15 Leu tRNA |
1021927 | 1022001 | + | 75 | 84621657 | XOO_r20 | - | 13 Val tRNA |
1022030 | 1022106 | + | 77 | 84621657 | XOO_r21 | - | 06 Asp tRNA |
1022201 | 1022277 | + | 77 | 84621657 | XOO_r22 | - | 06 Asp tRNA |
1030594 | 1030684 | + | 91 | 84621657 | XOO_r23 | - | 08 Ser tRNA |
1053135 | 1053227 | - | 93 | 84621657 | XOO_r24 | - | 08 Ser tRNA |
1659582 | 1659657 | + | 76 | 84621657 | XOO_r25 | - | 12 Thr tRNA |
1723607 | 1723682 | + | 76 | 84621657 | XOO_r26 | - | 10 Lys tRNA |
2165034 | 2165120 | - | 87 | 84621657 | XOO_r27 | - | 15 Leu tRNA |
2200156 | 2200245 | + | 90 | 84621657 | XOO_r28 | - | 08 Ser tRNA |
2329636 | 2329712 | + | 77 | 84621657 | XOO_r29 | - | 11 Arg tRNA |
2405677 | 2405752 | - | 76 | 84621657 | XOO_r30 | - | 01 Gly tRNA |
2405835 | 2405908 | - | 74 | 84621657 | XOO_r31 | - | 19 Cys tRNA |
2405977 | 2406052 | - | 76 | 84621657 | XOO_r32 | - | 01 Gly tRNA |
2438204 | 2438290 | - | 87 | 84621657 | XOO_r33 | - | 15 Leu tRNA |
2474149 | 2474235 | + | 87 | 84621657 | XOO_r34 | - | 15 Leu tRNA |
2491288 | 2491362 | + | 75 | 84621657 | XOO_r35 | - | 04 Glu tRNA |
2788174 | 2788249 | + | 76 | 84621657 | XOO_r36 | - | 02 Ala tRNA |
2788297 | 2788372 | + | 76 | 84621657 | XOO_r37 | - | 04 Glu tRNA |
2789132 | 2789207 | + | 76 | 84621657 | XOO_r38 | - | 02 Ala tRNA |
2789255 | 2789330 | + | 76 | 84621657 | XOO_r39 | - | 04 Glu tRNA |
2800698 | 2800774 | + | 77 | 84621657 | XOO_r40 | - | 03 Pro tRNA |
2887016 | 2887091 | + | 76 | 84621657 | XOO_r41 | - | 02 Ala tRNA |
3131220 | 3131296 | + | 77 | 84621657 | XOO_r42 | - | 11 Arg tRNA |
3131390 | 3131466 | + | 77 | 84621657 | XOO_r43 | - | 11 Arg tRNA |
3138863 | 3138955 | - | 93 | 84621657 | XOO_r44 | - | 08 Ser tRNA |
3320071 | 3320154 | + | 84 | 84621657 | XOO_r45 | - | 15 Leu tRNA |
3402661 | 3402736 | - | 76 | 84621657 | XOO_r46 | - | 17 Phe tRNA |
3423554 | 3423630 | - | 77 | 84621657 | XOO_r47 | - | 03 Pro tRNA |
3433519 | 3433593 | - | 75 | 84621657 | XOO_r48 | - | 13 Val tRNA |
3436441 | 3436517 | - | 77 | 84621657 | XOO_r49 | - | 07 Asn tRNA |
3465440 | 3465516 | - | 77 | 84621657 | XOO_r50 | - | 16 Met tRNA |
3480643 | 3480727 | - | 85 | 84621657 | XOO_r51 | - | 15 Leu tRNA |
3594191 | 3594264 | - | 74 | 84621657 | XOO_r52 | - | 01 Gly tRNA |
3861178 | 3861253 | - | 76 | 84621657 | XOO_r53 | - | 20 Trp tRNA |
3862596 | 3862671 | - | 76 | 84621657 | XOO_r54 | - | 12 Thr tRNA |
3862706 | 3862779 | - | 74 | 84621657 | XOO_r55 | - | 01 Gly tRNA |
3862809 | 3862894 | - | 86 | 84621657 | XOO_r56 | - | 18 Tyr tRNA |
3866682 | 3866758 | - | 77 | 84621657 | XOO_r57 | - | 05 Gln tRNA |
4428036 | 4428112 | + | 77 | 84621657 | XOO_r58 | - | 16 Met tRNA |
4428165 | 4428238 | + | 74 | 84621657 | XOO_r59 | - | 05 Gln tRNA |